Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNU6-34P-201ENST00000364874 107 ntBASIC1.94□□□□□ -2.1
CNTNAP3BQ96NU0 MIR521-2-201ENST00000384818 87 ntBASIC1.94□□□□□ -2.1
CNTNAP3BQ96NU0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CNTNAP3BQ96NU0 SNORA67.5-201ENST00000391036 107 ntBASIC1.94□□□□□ -2.1
CNTNAP3BQ96NU0 RNU1-123P-201ENST00000458950 160 ntBASIC1.94□□□□□ -2.1
CNTNAP3BQ96NU0 MIR4422-201ENST00000581938 83 ntBASIC1.94□□□□□ -2.1
CNTNAP3BQ96NU0 Y_RNA.68-201ENST00000362881 102 ntBASIC1.93□□□□□ -2.1
CNTNAP3BQ96NU0 SNORD113-2-201ENST00000391082 72 ntBASIC1.93□□□□□ -2.1
CNTNAP3BQ96NU0 AC018659.1-201ENST00000551083 169 ntBASIC1.93□□□□□ -2.1
CNTNAP3BQ96NU0 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
CNTNAP3BQ96NU0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CNTNAP3BQ96NU0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 RNU6-1162P-201ENST00000384443 104 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 MIR517B-201ENST00000385102 67 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 RNU6-930P-201ENST00000390938 100 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 SNORD111-201ENST00000408139 94 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 RNU7-56P-201ENST00000458744 62 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 AC008834.1-201ENST00000511612 175 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 MIR4804-201ENST00000581683 73 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 U2.7-201ENST00000619197 100 ntBASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CNTNAP3BQ96NU0 MIR548F3-201ENST00000408509 87 ntBASIC1.91□□□□□ -2.1
CNTNAP3BQ96NU0 RNU7-104P-201ENST00000459398 79 ntBASIC1.91□□□□□ -2.1
CNTNAP3BQ96NU0 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
CNTNAP3BQ96NU0 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
CNTNAP3BQ96NU0 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
CNTNAP3BQ96NU0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CNTNAP3BQ96NU0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CNTNAP3BQ96NU0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 Y_RNA.174-201ENST00000363781 105 ntBASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 MT-TY-201ENST00000387409 66 ntBASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 SNORA75.2-201ENST00000391138 150 ntBASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 SNORA75.3-201ENST00000391231 150 ntBASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 RNU1-78P-201ENST00000391248 165 ntBASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 AC003989.2-201ENST00000440224 169 ntBASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 RNU6-717P-201ENST00000459076 104 ntBASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 RN7SKP88-201ENST00000516847 250 ntBASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 7SK.8-201ENST00000612110 250 ntBASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 7SK.11-201ENST00000615477 250 ntBASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 7SK.13-201ENST00000622040 250 ntBASIC1.9□□□□□ -2.11
CNTNAP3BQ96NU0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CNTNAP3BQ96NU0 RNU4-33P-201ENST00000364316 85 ntBASIC1.89□□□□□ -2.11
CNTNAP3BQ96NU0 MIR548C-201ENST00000384815 97 ntBASIC1.89□□□□□ -2.11
CNTNAP3BQ96NU0 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
CNTNAP3BQ96NU0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.89□□□□□ -2.11
CNTNAP3BQ96NU0 RNU7-119P-201ENST00000459279 63 ntBASIC1.89□□□□□ -2.11
CNTNAP3BQ96NU0 AC084768.2-201ENST00000622736 221 ntBASIC1.89□□□□□ -2.11
CNTNAP3BQ96NU0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
CNTNAP3BQ96NU0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
CNTNAP3BQ96NU0 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
CNTNAP3BQ96NU0 AC067863.3-201ENST00000624172 122 ntBASIC1.88□□□□□ -2.11
CNTNAP3BQ96NU0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CNTNAP3BQ96NU0 Y_RNA.433-201ENST00000384089 102 ntBASIC1.87□□□□□ -2.11
CNTNAP3BQ96NU0 SNORA41B-201ENST00000384785 128 ntBASIC1.87□□□□□ -2.11
CNTNAP3BQ96NU0 MIR676-201ENST00000390702 67 ntBASIC1.87□□□□□ -2.11
CNTNAP3BQ96NU0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
CNTNAP3BQ96NU0 RNU1-119P-201ENST00000391122 165 ntBASIC1.86□□□□□ -2.11
CNTNAP3BQ96NU0 AC048334.1-201ENST00000477975 159 ntBASIC1.86□□□□□ -2.11
CNTNAP3BQ96NU0 AC021146.9-201ENST00000512503 156 ntBASIC1.86□□□□□ -2.11
CNTNAP3BQ96NU0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CNTNAP3BQ96NU0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CNTNAP3BQ96NU0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.85□□□□□ -2.11
CNTNAP3BQ96NU0 SNORD41.1-201ENST00000391000 69 ntBASIC1.85□□□□□ -2.11
CNTNAP3BQ96NU0 MIR934-201ENST00000401241 83 ntBASIC1.85□□□□□ -2.11
CNTNAP3BQ96NU0 RNA5SP338-201ENST00000410495 85 ntBASIC1.85□□□□□ -2.11
CNTNAP3BQ96NU0 snoU13.13-201ENST00000458842 104 ntBASIC1.85□□□□□ -2.11
CNTNAP3BQ96NU0 RNU7-74P-201ENST00000459104 62 ntBASIC1.85□□□□□ -2.11
CNTNAP3BQ96NU0 Y_RNA.633-201ENST00000459107 95 ntBASIC1.85□□□□□ -2.11
CNTNAP3BQ96NU0 SNORA31.2-201ENST00000516019 134 ntBASIC1.85□□□□□ -2.11
CNTNAP3BQ96NU0 RNA5SP476-201ENST00000516613 103 ntBASIC1.85□□□□□ -2.11
CNTNAP3BQ96NU0 RNU6-231P-201ENST00000517122 103 ntBASIC1.85□□□□□ -2.11
CNTNAP3BQ96NU0 AC023827.1-201ENST00000569247 97 ntBASIC1.85□□□□□ -2.11
CNTNAP3BQ96NU0 AL591704.2-201ENST00000421658 181 ntBASIC1.84□□□□□ -2.11
CNTNAP3BQ96NU0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.84□□□□□ -2.11
CNTNAP3BQ96NU0 SNORA48.3-201ENST00000391081 134 ntBASIC1.83□□□□□ -2.12
CNTNAP3BQ96NU0 SNORD114-4-201ENST00000363962 75 ntBASIC1.82□□□□□ -2.12
CNTNAP3BQ96NU0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CNTNAP3BQ96NU0 MIR4460-201ENST00000577862 86 ntBASIC1.82□□□□□ -2.12
CNTNAP3BQ96NU0 MIR5002-201ENST00000584713 97 ntBASIC1.82□□□□□ -2.12
CNTNAP3BQ96NU0 AL157834.3-201ENST00000615543 103 ntBASIC1.82□□□□□ -2.12
CNTNAP3BQ96NU0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.82□□□□□ -2.12
CNTNAP3BQ96NU0 Y_RNA.125-201ENST00000363371 111 ntBASIC1.81□□□□□ -2.12
CNTNAP3BQ96NU0 SNORA80D-201ENST00000384488 135 ntBASIC1.81□□□□□ -2.12
CNTNAP3BQ96NU0 HAR1A.1-201ENST00000459583 118 ntBASIC1.81□□□□□ -2.12
CNTNAP3BQ96NU0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.81□□□□□ -2.12
CNTNAP3BQ96NU0 SNORA40.16-201ENST00000517238 121 ntBASIC1.81□□□□□ -2.12
CNTNAP3BQ96NU0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CNTNAP3BQ96NU0 SNORA33.1-201ENST00000364957 130 ntBASIC1.8□□□□□ -2.12
CNTNAP3BQ96NU0 Y_RNA.325-201ENST00000365171 122 ntBASIC1.8□□□□□ -2.12
CNTNAP3BQ96NU0 SNORA15B-2-201ENST00000384058 135 ntBASIC1.8□□□□□ -2.12
CNTNAP3BQ96NU0 SNORA15B-1-201ENST00000384334 135 ntBASIC1.8□□□□□ -2.12
CNTNAP3BQ96NU0 RNU7-21P-201ENST00000459430 62 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 356.1 ms