Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SNORA77B-201ENST00000578179 125 ntBASIC2.06□□□□□ -2.08
TRIM47Q96LD4 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
TRIM47Q96LD4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
TRIM47Q96LD4 MIR545-201ENST00000385085 106 ntBASIC2.05□□□□□ -2.08
TRIM47Q96LD4 uc_338.16-201ENST00000621804 95 ntBASIC2.05□□□□□ -2.08
TRIM47Q96LD4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TRIM47Q96LD4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TRIM47Q96LD4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
TRIM47Q96LD4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM47Q96LD4 Y_RNA.327-201ENST00000365201 102 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 SNORD116.2-201ENST00000391251 93 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 MIR1276-201ENST00000408707 83 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 MIR6504-201ENST00000613520 61 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 AC067863.3-201ENST00000624172 122 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TRIM47Q96LD4 SNORA40.16-201ENST00000517238 121 ntBASIC2.02□□□□□ -2.09
TRIM47Q96LD4 MIR4804-201ENST00000581683 73 ntBASIC2.02□□□□□ -2.09
TRIM47Q96LD4 Y_RNA.174-201ENST00000363781 105 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 MT-TY-201ENST00000387409 66 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TRIM47Q96LD4 SNORD111-201ENST00000408139 94 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 MIR4419B-201ENST00000577260 68 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 AL157834.3-201ENST00000615543 103 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 MIR8063-201ENST00000621930 81 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 Y_RNA.325-201ENST00000365171 122 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 RNU7-74P-201ENST00000459104 62 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 AC023827.1-201ENST00000569247 97 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 MIR4460-201ENST00000577862 86 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 MIR548X-201ENST00000580069 75 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 MIR4713-201ENST00000582691 75 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRIM47Q96LD4 Y_RNA.246-201ENST00000364495 108 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 RNU6-392P-201ENST00000364926 101 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 SNORA33.1-201ENST00000364957 130 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 RNU1-119P-201ENST00000391122 165 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 SNORA75.2-201ENST00000391138 150 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 SNORA75.3-201ENST00000391231 150 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 RNU6-165P-201ENST00000517170 99 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM47Q96LD4 SNORD114-4-201ENST00000363962 75 ntBASIC1.98□□□□□ -2.09
TRIM47Q96LD4 RNU7-56P-201ENST00000458744 62 ntBASIC1.98□□□□□ -2.09
TRIM47Q96LD4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.98□□□□□ -2.09
TRIM47Q96LD4 AC019176.1-201ENST00000518519 225 ntBASIC1.98□□□□□ -2.09
TRIM47Q96LD4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
TRIM47Q96LD4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRIM47Q96LD4 Y_RNA.125-201ENST00000363371 111 ntBASIC1.97□□□□□ -2.09
TRIM47Q96LD4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TRIM47Q96LD4 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
TRIM47Q96LD4 SNORA9.1-201ENST00000362412 131 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 RNU6-838P-201ENST00000363399 108 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 RNU6-1246P-201ENST00000391064 107 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 SNORA31.2-201ENST00000516019 134 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 SNORD53B-201ENST00000577887 78 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 AL136317.1-201ENST00000612653 226 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 MIR8074-201ENST00000615081 81 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 SNORA15B-2-201ENST00000384058 135 ntBASIC1.95□□□□□ -2.1
TRIM47Q96LD4 SNORA15B-1-201ENST00000384334 135 ntBASIC1.95□□□□□ -2.1
TRIM47Q96LD4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.95□□□□□ -2.1
TRIM47Q96LD4 AC048334.1-201ENST00000477975 159 ntBASIC1.95□□□□□ -2.1
TRIM47Q96LD4 MIR7110-201ENST00000612638 86 ntBASIC1.95□□□□□ -2.1
TRIM47Q96LD4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.95□□□□□ -2.1
TRIM47Q96LD4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRIM47Q96LD4 RNU6-42P-201ENST00000384165 107 ntBASIC1.94□□□□□ -2.1
TRIM47Q96LD4 RNU6-994P-201ENST00000410507 111 ntBASIC1.94□□□□□ -2.1
TRIM47Q96LD4 SNORD48-201ENST00000364953 64 ntBASIC1.93□□□□□ -2.1
TRIM47Q96LD4 MIR100-201ENST00000385259 80 ntBASIC1.93□□□□□ -2.1
TRIM47Q96LD4 SNORD41.1-201ENST00000391000 69 ntBASIC1.93□□□□□ -2.1
TRIM47Q96LD4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.93□□□□□ -2.1
TRIM47Q96LD4 Y_RNA.633-201ENST00000459107 95 ntBASIC1.93□□□□□ -2.1
TRIM47Q96LD4 RNU5B-6P-201ENST00000516765 68 ntBASIC1.93□□□□□ -2.1
TRIM47Q96LD4 MIR302D-201ENST00000362275 68 ntBASIC1.92□□□□□ -2.1
TRIM47Q96LD4 RNU1-42P-201ENST00000364033 160 ntBASIC1.92□□□□□ -2.1
TRIM47Q96LD4 SNORA40B-201ENST00000385573 128 ntBASIC1.92□□□□□ -2.1
TRIM47Q96LD4 MIR4452-201ENST00000583004 71 ntBASIC1.92□□□□□ -2.1
TRIM47Q96LD4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.92□□□□□ -2.1
TRIM47Q96LD4 RNU1-141P-201ENST00000364623 158 ntBASIC1.91□□□□□ -2.1
TRIM47Q96LD4 SNORD116-16-201ENST00000384533 92 ntBASIC1.91□□□□□ -2.1
TRIM47Q96LD4 MIR520F-201ENST00000384824 87 ntBASIC1.91□□□□□ -2.1
TRIM47Q96LD4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.91□□□□□ -2.1
TRIM47Q96LD4 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.91□□□□□ -2.1
TRIM47Q96LD4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.91□□□□□ -2.1
TRIM47Q96LD4 SNORA7.1-201ENST00000363750 139 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 SNORA25.8-201ENST00000364831 128 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 RNU6-724P-201ENST00000390958 105 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 MIR548L-201ENST00000408303 86 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 AC079140.2-201ENST00000506193 142 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 RNA5SP220-201ENST00000516298 104 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 MIR3937-201ENST00000580135 106 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRIM47Q96LD4 SNORD1A-201ENST00000364968 72 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 MIR758-201ENST00000390227 88 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 RNU6-1250P-201ENST00000391218 107 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 SNORA44.1-201ENST00000517031 108 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 RNU6-810P-201ENST00000364001 107 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms