Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 Y_RNA.491-201ENST00000384417 107 ntBASIC0.38□□□□□ -2.35
VPS50Q96JG6 MIR548U-201ENST00000390728 81 ntBASIC0.38□□□□□ -2.35
VPS50Q96JG6 SNORD110-201ENST00000408189 75 ntBASIC0.38□□□□□ -2.35
VPS50Q96JG6 RNA5SP193-201ENST00000410353 107 ntBASIC0.38□□□□□ -2.35
VPS50Q96JG6 RNU6-1052P-201ENST00000411398 104 ntBASIC0.38□□□□□ -2.35
VPS50Q96JG6 SNORA18.5-201ENST00000516616 101 ntBASIC0.38□□□□□ -2.35
VPS50Q96JG6 RNU6-719P-201ENST00000516671 104 ntBASIC0.38□□□□□ -2.35
VPS50Q96JG6 RNU6-267P-201ENST00000516714 103 ntBASIC0.38□□□□□ -2.35
VPS50Q96JG6 MIR4668-201ENST00000582284 70 ntBASIC0.38□□□□□ -2.35
VPS50Q96JG6 MIR924-201ENST00000638017 53 ntBASIC0.38□□□□□ -2.35
VPS50Q96JG6 AC073869.9-201ENST00000641610 120 ntBASIC0.38□□□□□ -2.35
VPS50Q96JG6 SNORA2A-201ENST00000383885 135 ntBASIC0.37□□□□□ -2.35
VPS50Q96JG6 MIR760-201ENST00000390220 80 ntBASIC0.37□□□□□ -2.35
VPS50Q96JG6 RNU6-402P-201ENST00000410678 103 ntBASIC0.37□□□□□ -2.35
VPS50Q96JG6 AC006210.1-201ENST00000424882 111 ntBASIC0.37□□□□□ -2.35
VPS50Q96JG6 RNU7-153P-201ENST00000516455 62 ntBASIC0.37□□□□□ -2.35
VPS50Q96JG6 RNU6-1057P-201ENST00000517162 102 ntBASIC0.37□□□□□ -2.35
VPS50Q96JG6 RNU6-844P-201ENST00000517175 102 ntBASIC0.37□□□□□ -2.35
VPS50Q96JG6 MIR3140-201ENST00000583685 90 ntBASIC0.37□□□□□ -2.35
VPS50Q96JG6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
VPS50Q96JG6 RNU6-1298P-201ENST00000362456 101 ntBASIC0.36□□□□□ -2.35
VPS50Q96JG6 RNA5SP62-201ENST00000363457 110 ntBASIC0.36□□□□□ -2.35
VPS50Q96JG6 FGF7P7-201ENST00000514120 227 ntBASIC0.36□□□□□ -2.35
VPS50Q96JG6 RNU6-219P-201ENST00000364728 107 ntBASIC0.35□□□□□ -2.35
VPS50Q96JG6 AC073261.1-201ENST00000429409 121 ntBASIC0.35□□□□□ -2.35
VPS50Q96JG6 Y_RNA.694-201ENST00000516677 117 ntBASIC0.35□□□□□ -2.35
VPS50Q96JG6 RNU5B-6P-201ENST00000516765 68 ntBASIC0.35□□□□□ -2.35
VPS50Q96JG6 MIR4460-201ENST00000577862 86 ntBASIC0.35□□□□□ -2.35
VPS50Q96JG6 MIR5582-201ENST00000579697 68 ntBASIC0.35□□□□□ -2.35
VPS50Q96JG6 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
VPS50Q96JG6 Y_RNA.205-201ENST00000364128 113 ntBASIC0.34□□□□□ -2.36
VPS50Q96JG6 SNORD116-22-201ENST00000384430 92 ntBASIC0.34□□□□□ -2.36
VPS50Q96JG6 Y_RNA.620-201ENST00000411009 88 ntBASIC0.34□□□□□ -2.36
VPS50Q96JG6 HMGN2P22-201ENST00000427588 175 ntBASIC0.34□□□□□ -2.36
VPS50Q96JG6 RNU7-129P-201ENST00000516128 62 ntBASIC0.34□□□□□ -2.36
VPS50Q96JG6 MIR6779-201ENST00000617283 64 ntBASIC0.34□□□□□ -2.36
VPS50Q96JG6 MIR499B-201ENST00000636498 73 ntBASIC0.34□□□□□ -2.36
VPS50Q96JG6 MIR501-201ENST00000390204 84 ntBASIC0.33□□□□□ -2.36
VPS50Q96JG6 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
VPS50Q96JG6 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
VPS50Q96JG6 SNORA62.5-201ENST00000516634 120 ntBASIC0.33□□□□□ -2.36
VPS50Q96JG6 MIR5706-201ENST00000579841 80 ntBASIC0.33□□□□□ -2.36
VPS50Q96JG6 YWHAEP2-201ENST00000580066 112 ntBASIC0.33□□□□□ -2.36
VPS50Q96JG6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
VPS50Q96JG6 RNU6-633P-201ENST00000362612 103 ntBASIC0.32□□□□□ -2.36
VPS50Q96JG6 RNA5SP128-201ENST00000365305 116 ntBASIC0.32□□□□□ -2.36
VPS50Q96JG6 MT-TY-201ENST00000387409 66 ntBASIC0.32□□□□□ -2.36
VPS50Q96JG6 RNU6-848P-201ENST00000515948 107 ntBASIC0.32□□□□□ -2.36
VPS50Q96JG6 RNU6-617P-201ENST00000516147 107 ntBASIC0.32□□□□□ -2.36
VPS50Q96JG6 RNU6-473P-201ENST00000516164 107 ntBASIC0.32□□□□□ -2.36
VPS50Q96JG6 RNU6-1049P-201ENST00000516414 107 ntBASIC0.32□□□□□ -2.36
VPS50Q96JG6 MIR4473-201ENST00000583731 91 ntBASIC0.32□□□□□ -2.36
VPS50Q96JG6 AC069503.3-201ENST00000618674 145 ntBASIC0.32□□□□□ -2.36
VPS50Q96JG6 Y_RNA.17-201ENST00000362433 111 ntBASIC0.31□□□□□ -2.36
VPS50Q96JG6 RNU6-1134P-201ENST00000365156 101 ntBASIC0.31□□□□□ -2.36
VPS50Q96JG6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
VPS50Q96JG6 RNU6-1051P-201ENST00000365471 102 ntBASIC0.31□□□□□ -2.36
VPS50Q96JG6 RNU6V-201ENST00000384105 107 ntBASIC0.31□□□□□ -2.36
VPS50Q96JG6 MIR1236-201ENST00000408340 102 ntBASIC0.31□□□□□ -2.36
VPS50Q96JG6 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.31□□□□□ -2.36
VPS50Q96JG6 AC069113.3-201ENST00000521019 150 ntBASIC0.31□□□□□ -2.36
VPS50Q96JG6 MIR4796-201ENST00000580742 81 ntBASIC0.31□□□□□ -2.36
VPS50Q96JG6 MIR548O2-201ENST00000616090 70 ntBASIC0.31□□□□□ -2.36
VPS50Q96JG6 MIR330-201ENST00000362196 94 ntBASIC0.3□□□□□ -2.36
VPS50Q96JG6 Y_RNA.558-201ENST00000384685 113 ntBASIC0.3□□□□□ -2.36
VPS50Q96JG6 MIR519C-201ENST00000385053 87 ntBASIC0.3□□□□□ -2.36
VPS50Q96JG6 Y_RNA.593-201ENST00000410292 98 ntBASIC0.3□□□□□ -2.36
VPS50Q96JG6 RNA5SP170-201ENST00000517150 101 ntBASIC0.3□□□□□ -2.36
VPS50Q96JG6 SNORA63.2-201ENST00000362603 126 ntBASIC0.29□□□□□ -2.36
VPS50Q96JG6 MIR548AE1-201ENST00000583292 70 ntBASIC0.29□□□□□ -2.36
VPS50Q96JG6 SNORA9.1-201ENST00000362412 131 ntBASIC0.28□□□□□ -2.36
VPS50Q96JG6 Y_RNA.125-201ENST00000363371 111 ntBASIC0.28□□□□□ -2.36
VPS50Q96JG6 RNU6-497P-201ENST00000365316 104 ntBASIC0.28□□□□□ -2.36
VPS50Q96JG6 RNU6-54P-201ENST00000365563 107 ntBASIC0.28□□□□□ -2.36
VPS50Q96JG6 RNU6-127P-201ENST00000390897 107 ntBASIC0.28□□□□□ -2.36
VPS50Q96JG6 U3.27-201ENST00000391237 200 ntBASIC0.28□□□□□ -2.36
VPS50Q96JG6 MTATP6P29-201ENST00000415057 132 ntBASIC0.28□□□□□ -2.36
VPS50Q96JG6 MIR4677-201ENST00000584153 80 ntBASIC0.28□□□□□ -2.36
VPS50Q96JG6 MIR8087-201ENST00000612745 78 ntBASIC0.28□□□□□ -2.36
VPS50Q96JG6 RNU6-294P-201ENST00000364999 102 ntBASIC0.27□□□□□ -2.37
VPS50Q96JG6 SNORA24B-201ENST00000384176 131 ntBASIC0.27□□□□□ -2.37
VPS50Q96JG6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
VPS50Q96JG6 snoU13.17-201ENST00000458802 104 ntBASIC0.27□□□□□ -2.37
VPS50Q96JG6 MIR548AD-201ENST00000584780 82 ntBASIC0.27□□□□□ -2.37
VPS50Q96JG6 RNU6-675P-201ENST00000384236 104 ntBASIC0.26□□□□□ -2.37
VPS50Q96JG6 MIR548BB-201ENST00000626714 66 ntBASIC0.26□□□□□ -2.37
VPS50Q96JG6 Y_RNA.73-201ENST00000362910 113 ntBASIC0.25□□□□□ -2.37
VPS50Q96JG6 Y_RNA.369-201ENST00000365568 117 ntBASIC0.25□□□□□ -2.37
VPS50Q96JG6 MIR643-201ENST00000385267 97 ntBASIC0.25□□□□□ -2.37
VPS50Q96JG6 MIR216B-201ENST00000390186 82 ntBASIC0.25□□□□□ -2.37
VPS50Q96JG6 SNORA25.13-201ENST00000516395 103 ntBASIC0.25□□□□□ -2.37
VPS50Q96JG6 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.25□□□□□ -2.37
VPS50Q96JG6 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
VPS50Q96JG6 MIR3925-201ENST00000584674 77 ntBASIC0.25□□□□□ -2.37
VPS50Q96JG6 RNA5SP457-201ENST00000363657 124 ntBASIC0.24□□□□□ -2.37
VPS50Q96JG6 Y_RNA.611-201ENST00000410682 108 ntBASIC0.24□□□□□ -2.37
VPS50Q96JG6 RNU6-762P-201ENST00000517107 102 ntBASIC0.24□□□□□ -2.37
VPS50Q96JG6 U7.6-201ENST00000610841 64 ntBASIC0.24□□□□□ -2.37
VPS50Q96JG6 Y_RNA.437-201ENST00000384113 113 ntBASIC0.23□□□□□ -2.37
VPS50Q96JG6 MIR516B1-201ENST00000385211 90 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms