Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-633P-201ENST00000362612 103 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 RNY4P3-201ENST00000365254 95 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 MIR519C-201ENST00000385053 87 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 U3.27-201ENST00000391237 200 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 RNA5SP193-201ENST00000410353 107 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 RNU6-848P-201ENST00000515948 107 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 RNU6-617P-201ENST00000516147 107 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 RNU6-473P-201ENST00000516164 107 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 RNU6-1049P-201ENST00000516414 107 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 Y_RNA.681-201ENST00000516445 113 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 AL109933.3-201ENST00000619095 188 ntBASIC0.47□□□□□ -2.33
CTHRC1Q96CG8 RNU6-294P-201ENST00000364999 102 ntBASIC0.46□□□□□ -2.34
CTHRC1Q96CG8 SNORA18.5-201ENST00000516616 101 ntBASIC0.46□□□□□ -2.34
CTHRC1Q96CG8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 SNORD44.1-201ENST00000363202 61 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 SNORD115-37-201ENST00000363768 82 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 Y_RNA.258-201ENST00000364613 105 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 RNU1-141P-201ENST00000364623 158 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 SNORA2A-201ENST00000383885 135 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 MIR451A-201ENST00000385059 72 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 RNU6-402P-201ENST00000410678 103 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 Y_RNA.620-201ENST00000411009 88 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 MIR5706-201ENST00000579841 80 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 U7.6-201ENST00000610841 64 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 IGLL4P-201ENST00000614590 133 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 AC243829.3-201ENST00000622177 108 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
CTHRC1Q96CG8 Y_RNA.17-201ENST00000362433 111 ntBASIC0.44□□□□□ -2.34
CTHRC1Q96CG8 RNU6-1298P-201ENST00000362456 101 ntBASIC0.44□□□□□ -2.34
CTHRC1Q96CG8 RNA5SP257-201ENST00000363023 116 ntBASIC0.44□□□□□ -2.34
CTHRC1Q96CG8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.44□□□□□ -2.34
CTHRC1Q96CG8 AC006210.1-201ENST00000424882 111 ntBASIC0.44□□□□□ -2.34
CTHRC1Q96CG8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
CTHRC1Q96CG8 SNORA68.3-201ENST00000515906 83 ntBASIC0.44□□□□□ -2.34
CTHRC1Q96CG8 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
CTHRC1Q96CG8 MIR4460-201ENST00000577862 86 ntBASIC0.44□□□□□ -2.34
CTHRC1Q96CG8 MIR330-201ENST00000362196 94 ntBASIC0.43□□□□□ -2.34
CTHRC1Q96CG8 RNA5SP292-201ENST00000390974 118 ntBASIC0.43□□□□□ -2.34
CTHRC1Q96CG8 SNORD110-201ENST00000408189 75 ntBASIC0.43□□□□□ -2.34
CTHRC1Q96CG8 RNA5SP484-201ENST00000458857 111 ntBASIC0.43□□□□□ -2.34
CTHRC1Q96CG8 NAMPTP3-201ENST00000569273 224 ntBASIC0.43□□□□□ -2.34
CTHRC1Q96CG8 MIR4752-201ENST00000579672 72 ntBASIC0.43□□□□□ -2.34
CTHRC1Q96CG8 AC090625.1-201ENST00000357130 210 ntBASIC0.42□□□□□ -2.34
CTHRC1Q96CG8 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
CTHRC1Q96CG8 RNU6-219P-201ENST00000364728 107 ntBASIC0.42□□□□□ -2.34
CTHRC1Q96CG8 Y_RNA.433-201ENST00000384089 102 ntBASIC0.42□□□□□ -2.34
CTHRC1Q96CG8 Y_RNA.558-201ENST00000384685 113 ntBASIC0.42□□□□□ -2.34
CTHRC1Q96CG8 FGF7P7-201ENST00000514120 227 ntBASIC0.42□□□□□ -2.34
CTHRC1Q96CG8 MIR4796-201ENST00000580742 81 ntBASIC0.42□□□□□ -2.34
CTHRC1Q96CG8 Y_RNA.43-201ENST00000362670 111 ntBASIC0.41□□□□□ -2.34
CTHRC1Q96CG8 RNY1P1-201ENST00000364372 112 ntBASIC0.41□□□□□ -2.34
CTHRC1Q96CG8 MIR1197-201ENST00000408818 88 ntBASIC0.41□□□□□ -2.34
CTHRC1Q96CG8 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
CTHRC1Q96CG8 AC093423.1-201ENST00000440817 142 ntBASIC0.41□□□□□ -2.34
CTHRC1Q96CG8 AC006254.2-201ENST00000603259 279 ntBASIC0.41□□□□□ -2.34
CTHRC1Q96CG8 AC069503.3-201ENST00000618674 145 ntBASIC0.41□□□□□ -2.34
CTHRC1Q96CG8 SNORA63.2-201ENST00000362603 126 ntBASIC0.4□□□□□ -2.35
CTHRC1Q96CG8 RNU6-1255P-201ENST00000363434 112 ntBASIC0.4□□□□□ -2.35
CTHRC1Q96CG8 RNA5SP62-201ENST00000363457 110 ntBASIC0.4□□□□□ -2.35
CTHRC1Q96CG8 SNORD115-27-201ENST00000364430 82 ntBASIC0.4□□□□□ -2.35
CTHRC1Q96CG8 RNU6-1051P-201ENST00000365471 102 ntBASIC0.4□□□□□ -2.35
CTHRC1Q96CG8 RNU6-1052P-201ENST00000411398 104 ntBASIC0.4□□□□□ -2.35
CTHRC1Q96CG8 RNU6-719P-201ENST00000516671 104 ntBASIC0.4□□□□□ -2.35
CTHRC1Q96CG8 RNU6-267P-201ENST00000516714 103 ntBASIC0.4□□□□□ -2.35
CTHRC1Q96CG8 RNU6-675P-201ENST00000384236 104 ntBASIC0.39□□□□□ -2.35
CTHRC1Q96CG8 MT-TY-201ENST00000387409 66 ntBASIC0.39□□□□□ -2.35
CTHRC1Q96CG8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
CTHRC1Q96CG8 AC093729.1-201ENST00000513074 128 ntBASIC0.39□□□□□ -2.35
CTHRC1Q96CG8 MIR450A2-201ENST00000385022 100 ntBASIC0.38□□□□□ -2.35
CTHRC1Q96CG8 Y_RNA.611-201ENST00000410682 108 ntBASIC0.38□□□□□ -2.35
CTHRC1Q96CG8 RNU7-153P-201ENST00000516455 62 ntBASIC0.38□□□□□ -2.35
CTHRC1Q96CG8 SNORA70.25-201ENST00000612741 95 ntBASIC0.38□□□□□ -2.35
CTHRC1Q96CG8 MIR6755-201ENST00000619993 66 ntBASIC0.38□□□□□ -2.35
CTHRC1Q96CG8 MIR548BB-201ENST00000626714 66 ntBASIC0.38□□□□□ -2.35
CTHRC1Q96CG8 MIR103A1-201ENST00000362165 78 ntBASIC0.37□□□□□ -2.35
CTHRC1Q96CG8 RNU5F-1-201ENST00000362507 117 ntBASIC0.37□□□□□ -2.35
CTHRC1Q96CG8 MIR760-201ENST00000390220 80 ntBASIC0.37□□□□□ -2.35
CTHRC1Q96CG8 Y_RNA.593-201ENST00000410292 98 ntBASIC0.37□□□□□ -2.35
CTHRC1Q96CG8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.37□□□□□ -2.35
CTHRC1Q96CG8 YWHAEP2-201ENST00000580066 112 ntBASIC0.37□□□□□ -2.35
CTHRC1Q96CG8 MIR548O2-201ENST00000616090 70 ntBASIC0.37□□□□□ -2.35
CTHRC1Q96CG8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.36□□□□□ -2.35
CTHRC1Q96CG8 RNA5SP395-201ENST00000516567 118 ntBASIC0.36□□□□□ -2.35
CTHRC1Q96CG8 MIR3140-201ENST00000583685 90 ntBASIC0.36□□□□□ -2.35
CTHRC1Q96CG8 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
CTHRC1Q96CG8 SNORA9.1-201ENST00000362412 131 ntBASIC0.35□□□□□ -2.35
CTHRC1Q96CG8 AC073261.1-201ENST00000429409 121 ntBASIC0.35□□□□□ -2.35
CTHRC1Q96CG8 SNORA25.13-201ENST00000516395 103 ntBASIC0.35□□□□□ -2.35
CTHRC1Q96CG8 SNORA62.5-201ENST00000516634 120 ntBASIC0.35□□□□□ -2.35
CTHRC1Q96CG8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.35□□□□□ -2.35
CTHRC1Q96CG8 RNU1-29P-201ENST00000606574 126 ntBASIC0.35□□□□□ -2.35
CTHRC1Q96CG8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.35□□□□□ -2.35
CTHRC1Q96CG8 RNA5SP128-201ENST00000365305 116 ntBASIC0.34□□□□□ -2.36
CTHRC1Q96CG8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
CTHRC1Q96CG8 RNU5B-6P-201ENST00000516765 68 ntBASIC0.34□□□□□ -2.36
CTHRC1Q96CG8 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.34□□□□□ -2.36
CTHRC1Q96CG8 uc_338.10-201ENST00000621872 182 ntBASIC0.34□□□□□ -2.36
CTHRC1Q96CG8 Y_RNA.426-201ENST00000384068 113 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 236.2 ms