Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MIR4795-201ENST00000584182 89 ntBASIC-1.81□□□□□ -2.7
TOPBP1Q92547 MIR6818-201ENST00000621576 65 ntBASIC-1.81□□□□□ -2.7
TOPBP1Q92547 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.82□□□□□ -2.7
TOPBP1Q92547 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.82□□□□□ -2.7
TOPBP1Q92547 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.82□□□□□ -2.7
TOPBP1Q92547 RNU6-474P-201ENST00000384243 107 ntBASIC-1.82□□□□□ -2.7
TOPBP1Q92547 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.82□□□□□ -2.7
TOPBP1Q92547 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.82□□□□□ -2.7
TOPBP1Q92547 HLA-S-202ENST00000425174 53 ntBASIC-1.82□□□□□ -2.7
TOPBP1Q92547 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.82□□□□□ -2.7
TOPBP1Q92547 RNU7-24P-201ENST00000458867 62 ntBASIC-1.82□□□□□ -2.7
TOPBP1Q92547 CYP3A54P-201ENST00000566950 75 ntBASIC-1.82□□□□□ -2.7
TOPBP1Q92547 MIR3140-201ENST00000583685 90 ntBASIC-1.82□□□□□ -2.7
TOPBP1Q92547 RNU6-746P-201ENST00000384112 109 ntBASIC-1.83□□□□□ -2.7
TOPBP1Q92547 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.83□□□□□ -2.7
TOPBP1Q92547 RNU7-134P-201ENST00000458997 64 ntBASIC-1.83□□□□□ -2.7
TOPBP1Q92547 AC107027.2-201ENST00000512197 115 ntBASIC-1.83□□□□□ -2.7
TOPBP1Q92547 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.84□□□□□ -2.7
TOPBP1Q92547 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.84□□□□□ -2.7
TOPBP1Q92547 SNORD50.2-201ENST00000365465 70 ntBASIC-1.84□□□□□ -2.7
TOPBP1Q92547 RNU6-260P-201ENST00000384092 107 ntBASIC-1.84□□□□□ -2.7
TOPBP1Q92547 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.84□□□□□ -2.7
TOPBP1Q92547 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.84□□□□□ -2.7
TOPBP1Q92547 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.84□□□□□ -2.7
TOPBP1Q92547 MIR1255B2-201ENST00000408618 67 ntBASIC-1.84□□□□□ -2.7
TOPBP1Q92547 MIR3121-201ENST00000579680 77 ntBASIC-1.84□□□□□ -2.7
TOPBP1Q92547 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.84□□□□□ -2.7
TOPBP1Q92547 RNU6-312P-201ENST00000364629 107 ntBASIC-1.85□□□□□ -2.71
TOPBP1Q92547 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.85□□□□□ -2.71
TOPBP1Q92547 MIR1302-6-201ENST00000408466 90 ntBASIC-1.85□□□□□ -2.71
TOPBP1Q92547 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.86□□□□□ -2.71
TOPBP1Q92547 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.86□□□□□ -2.71
TOPBP1Q92547 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.86□□□□□ -2.71
TOPBP1Q92547 RNU6-713P-201ENST00000384761 107 ntBASIC-1.86□□□□□ -2.71
TOPBP1Q92547 MIR548P-201ENST00000408336 84 ntBASIC-1.86□□□□□ -2.71
TOPBP1Q92547 AC025521.1-201ENST00000621624 286 ntBASIC-1.86□□□□□ -2.71
TOPBP1Q92547 U6.104-201ENST00000637979 90 ntBASIC-1.86□□□□□ -2.71
TOPBP1Q92547 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.87□□□□□ -2.71
TOPBP1Q92547 MIR548A1-201ENST00000385041 97 ntBASIC-1.87□□□□□ -2.71
TOPBP1Q92547 SNORD75.2-201ENST00000408784 58 ntBASIC-1.87□□□□□ -2.71
TOPBP1Q92547 AC022028.1-201ENST00000412054 408 ntBASIC-1.87□□□□□ -2.71
TOPBP1Q92547 MIR4770-201ENST00000579149 58 ntBASIC-1.87□□□□□ -2.71
TOPBP1Q92547 RNY1P11-201ENST00000363759 113 ntBASIC-1.88□□□□□ -2.71
TOPBP1Q92547 RNU6-132P-201ENST00000383863 107 ntBASIC-1.88□□□□□ -2.71
TOPBP1Q92547 RNY3P14-201ENST00000384309 102 ntBASIC-1.88□□□□□ -2.71
TOPBP1Q92547 MIR548D2-201ENST00000384955 97 ntBASIC-1.88□□□□□ -2.71
TOPBP1Q92547 MT-TW-201ENST00000387382 68 ntBASIC-1.88□□□□□ -2.71
TOPBP1Q92547 SNORD37.2-201ENST00000391075 66 ntBASIC-1.88□□□□□ -2.71
TOPBP1Q92547 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.88□□□□□ -2.71
TOPBP1Q92547 SNORD127-201ENST00000458892 86 ntBASIC-1.88□□□□□ -2.71
TOPBP1Q92547 MIR5591-201ENST00000578248 65 ntBASIC-1.88□□□□□ -2.71
TOPBP1Q92547 MIR4680-201ENST00000580906 66 ntBASIC-1.88□□□□□ -2.71
TOPBP1Q92547 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.89□□□□□ -2.71
TOPBP1Q92547 RNA5SP136-201ENST00000410906 107 ntBASIC-1.89□□□□□ -2.71
TOPBP1Q92547 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.89□□□□□ -2.71
TOPBP1Q92547 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.9□□□□□ -2.71
TOPBP1Q92547 MIR548U-201ENST00000390728 81 ntBASIC-1.9□□□□□ -2.71
TOPBP1Q92547 RNU7-85P-201ENST00000458851 63 ntBASIC-1.9□□□□□ -2.71
TOPBP1Q92547 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.9□□□□□ -2.71
TOPBP1Q92547 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.9□□□□□ -2.71
TOPBP1Q92547 MIR496-201ENST00000385226 102 ntBASIC-1.91□□□□□ -2.71
TOPBP1Q92547 MIR1263-201ENST00000408324 86 ntBASIC-1.91□□□□□ -2.71
TOPBP1Q92547 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.91□□□□□ -2.71
TOPBP1Q92547 SNORA24B-201ENST00000384176 131 ntBASIC-1.91□□□□□ -2.72
TOPBP1Q92547 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.91□□□□□ -2.72
TOPBP1Q92547 RNU6-880P-201ENST00000384526 107 ntBASIC-1.91□□□□□ -2.72
TOPBP1Q92547 RNA5SP26-201ENST00000362406 119 ntBASIC-1.92□□□□□ -2.72
TOPBP1Q92547 SNORD115-22-201ENST00000364456 82 ntBASIC-1.92□□□□□ -2.72
TOPBP1Q92547 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.92□□□□□ -2.72
TOPBP1Q92547 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.92□□□□□ -2.72
TOPBP1Q92547 MIR889-201ENST00000401280 79 ntBASIC-1.92□□□□□ -2.72
TOPBP1Q92547 RNU6-985P-201ENST00000410182 104 ntBASIC-1.92□□□□□ -2.72
TOPBP1Q92547 RNA5SP147-201ENST00000516493 109 ntBASIC-1.92□□□□□ -2.72
TOPBP1Q92547 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.93□□□□□ -2.72
TOPBP1Q92547 SNORA33.1-201ENST00000364957 130 ntBASIC-1.93□□□□□ -2.72
TOPBP1Q92547 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.93□□□□□ -2.72
TOPBP1Q92547 RNU2-51P-201ENST00000410708 197 ntBASIC-1.93□□□□□ -2.72
TOPBP1Q92547 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.93□□□□□ -2.72
TOPBP1Q92547 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.93□□□□□ -2.72
TOPBP1Q92547 MIR507-201ENST00000385234 94 ntBASIC-1.94□□□□□ -2.72
TOPBP1Q92547 RNU6-239P-201ENST00000390990 99 ntBASIC-1.94□□□□□ -2.72
TOPBP1Q92547 RBMX2P4-201ENST00000441256 376 ntBASIC-1.94□□□□□ -2.72
TOPBP1Q92547 AL353691.2-201ENST00000443795 59 ntBASIC-1.94□□□□□ -2.72
TOPBP1Q92547 snoU13.17-201ENST00000458802 104 ntBASIC-1.94□□□□□ -2.72
TOPBP1Q92547 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.94□□□□□ -2.72
TOPBP1Q92547 AL513043.2-201ENST00000573941 143 ntBASIC-1.94□□□□□ -2.72
TOPBP1Q92547 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.94□□□□□ -2.72
TOPBP1Q92547 AC006254.2-201ENST00000603259 279 ntBASIC-1.94□□□□□ -2.72
TOPBP1Q92547 RNU6-164P-201ENST00000364604 103 ntBASIC-1.95□□□□□ -2.72
TOPBP1Q92547 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.95□□□□□ -2.72
TOPBP1Q92547 MIR203A-201ENST00000384836 110 ntBASIC-1.95□□□□□ -2.72
TOPBP1Q92547 RNU6-918P-201ENST00000391219 106 ntBASIC-1.95□□□□□ -2.72
TOPBP1Q92547 MIR6509-201ENST00000614603 85 ntBASIC-1.95□□□□□ -2.72
TOPBP1Q92547 MIR8062-201ENST00000621515 85 ntBASIC-1.95□□□□□ -2.72
TOPBP1Q92547 RNU6-238P-201ENST00000363313 106 ntBASIC-1.96□□□□□ -2.72
TOPBP1Q92547 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.96□□□□□ -2.72
TOPBP1Q92547 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.96□□□□□ -2.72
TOPBP1Q92547 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.96□□□□□ -2.72
TOPBP1Q92547 AL078595.1-201ENST00000404458 226 ntBASIC-1.96□□□□□ -2.72
TOPBP1Q92547 AC130289.1-201ENST00000577321 73 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 263.9 ms