Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC098934.3-201ENST00000430450 190 ntBASIC0.7□□□□□ -2.3
RTF1Q92541 RNU6-267P-201ENST00000516714 103 ntBASIC0.7□□□□□ -2.3
RTF1Q92541 RNU6-1057P-201ENST00000517162 102 ntBASIC0.7□□□□□ -2.3
RTF1Q92541 MIR8087-201ENST00000612745 78 ntBASIC0.7□□□□□ -2.3
RTF1Q92541 IGLL4P-201ENST00000614590 133 ntBASIC0.7□□□□□ -2.3
RTF1Q92541 MIR216B-201ENST00000390186 82 ntBASIC0.69□□□□□ -2.3
RTF1Q92541 RN7SKP12-201ENST00000516275 143 ntBASIC0.69□□□□□ -2.3
RTF1Q92541 RNU6-229P-201ENST00000516614 102 ntBASIC0.69□□□□□ -2.3
RTF1Q92541 SNORA18.5-201ENST00000516616 101 ntBASIC0.69□□□□□ -2.3
RTF1Q92541 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
RTF1Q92541 RNY1P1-201ENST00000364372 112 ntBASIC0.68□□□□□ -2.3
RTF1Q92541 MIR518A1-201ENST00000385068 85 ntBASIC0.68□□□□□ -2.3
RTF1Q92541 MIR519E-201ENST00000385075 84 ntBASIC0.68□□□□□ -2.3
RTF1Q92541 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
RTF1Q92541 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.68□□□□□ -2.3
RTF1Q92541 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
RTF1Q92541 RNA5SP330-201ENST00000517096 96 ntBASIC0.68□□□□□ -2.3
RTF1Q92541 MIR4711-201ENST00000578274 70 ntBASIC0.68□□□□□ -2.3
RTF1Q92541 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.68□□□□□ -2.3
RTF1Q92541 AC243829.3-201ENST00000622177 108 ntBASIC0.68□□□□□ -2.3
RTF1Q92541 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.67□□□□□ -2.3
RTF1Q92541 SNORD115-37-201ENST00000363768 82 ntBASIC0.67□□□□□ -2.3
RTF1Q92541 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
RTF1Q92541 RNU6-820P-201ENST00000384273 107 ntBASIC0.67□□□□□ -2.3
RTF1Q92541 RNU6-269P-201ENST00000391077 97 ntBASIC0.67□□□□□ -2.3
RTF1Q92541 U3.27-201ENST00000391237 200 ntBASIC0.67□□□□□ -2.3
RTF1Q92541 HAR1A.1-201ENST00000459583 118 ntBASIC0.67□□□□□ -2.3
RTF1Q92541 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.67□□□□□ -2.3
RTF1Q92541 RNU6-35P-201ENST00000384530 107 ntBASIC0.66□□□□□ -2.3
RTF1Q92541 RNA5SP193-201ENST00000410353 107 ntBASIC0.66□□□□□ -2.3
RTF1Q92541 MIR4796-201ENST00000580742 81 ntBASIC0.66□□□□□ -2.3
RTF1Q92541 SNORA25.18-201ENST00000607153 114 ntBASIC0.66□□□□□ -2.3
RTF1Q92541 MIR548BB-201ENST00000626714 66 ntBASIC0.66□□□□□ -2.3
RTF1Q92541 AC073869.9-201ENST00000641610 120 ntBASIC0.66□□□□□ -2.3
RTF1Q92541 MIR451A-201ENST00000385059 72 ntBASIC0.65□□□□□ -2.31
RTF1Q92541 AC093423.1-201ENST00000440817 142 ntBASIC0.65□□□□□ -2.31
RTF1Q92541 AC093729.1-201ENST00000513074 128 ntBASIC0.65□□□□□ -2.31
RTF1Q92541 RNU6-762P-201ENST00000517107 102 ntBASIC0.65□□□□□ -2.31
RTF1Q92541 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
RTF1Q92541 SNORD73B-201ENST00000364394 72 ntBASIC0.64□□□□□ -2.31
RTF1Q92541 RNY4P3-201ENST00000365254 95 ntBASIC0.64□□□□□ -2.31
RTF1Q92541 RNU7-153P-201ENST00000516455 62 ntBASIC0.64□□□□□ -2.31
RTF1Q92541 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
RTF1Q92541 MIR5087-201ENST00000635826 76 ntBASIC0.64□□□□□ -2.31
RTF1Q92541 MIR330-201ENST00000362196 94 ntBASIC0.63□□□□□ -2.31
RTF1Q92541 MIR1302-4-201ENST00000408701 150 ntBASIC0.63□□□□□ -2.31
RTF1Q92541 RNU2-59P-201ENST00000410482 191 ntBASIC0.63□□□□□ -2.31
RTF1Q92541 Y_RNA.611-201ENST00000410682 108 ntBASIC0.63□□□□□ -2.31
RTF1Q92541 AC114737.2-201ENST00000421583 173 ntBASIC0.63□□□□□ -2.31
RTF1Q92541 AL157398.1-201ENST00000452981 186 ntBASIC0.63□□□□□ -2.31
RTF1Q92541 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
RTF1Q92541 SNORA63.2-201ENST00000362603 126 ntBASIC0.62□□□□□ -2.31
RTF1Q92541 RNU1-141P-201ENST00000364623 158 ntBASIC0.62□□□□□ -2.31
RTF1Q92541 RNU6-1051P-201ENST00000365471 102 ntBASIC0.62□□□□□ -2.31
RTF1Q92541 RNU6-848P-201ENST00000515948 107 ntBASIC0.62□□□□□ -2.31
RTF1Q92541 RNU6-863P-201ENST00000515989 104 ntBASIC0.62□□□□□ -2.31
RTF1Q92541 RNU6-617P-201ENST00000516147 107 ntBASIC0.62□□□□□ -2.31
RTF1Q92541 RNU6-473P-201ENST00000516164 107 ntBASIC0.62□□□□□ -2.31
RTF1Q92541 RNU6-1049P-201ENST00000516414 107 ntBASIC0.62□□□□□ -2.31
RTF1Q92541 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.62□□□□□ -2.31
RTF1Q92541 MIR4679-1-201ENST00000637619 75 ntBASIC0.62□□□□□ -2.31
RTF1Q92541 MIR494-201ENST00000349529 81 ntBASIC0.61□□□□□ -2.31
RTF1Q92541 AC069271.1-201ENST00000445577 156 ntBASIC0.61□□□□□ -2.31
RTF1Q92541 SNORA25.13-201ENST00000516395 103 ntBASIC0.61□□□□□ -2.31
RTF1Q92541 RNA5SP476-201ENST00000516613 103 ntBASIC0.61□□□□□ -2.31
RTF1Q92541 MIR5588-201ENST00000581890 63 ntBASIC0.61□□□□□ -2.31
RTF1Q92541 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
RTF1Q92541 Y_RNA.73-201ENST00000362910 113 ntBASIC0.6□□□□□ -2.31
RTF1Q92541 RNU6-979P-201ENST00000383896 107 ntBASIC0.6□□□□□ -2.31
RTF1Q92541 Y_RNA.426-201ENST00000384068 113 ntBASIC0.6□□□□□ -2.31
RTF1Q92541 MIR5706-201ENST00000579841 80 ntBASIC0.6□□□□□ -2.31
RTF1Q92541 AC062037.1-201ENST00000605302 128 ntBASIC0.6□□□□□ -2.31
RTF1Q92541 AC006160.2-201ENST00000637708 154 ntBASIC0.6□□□□□ -2.31
RTF1Q92541 RNA5SP484-201ENST00000458857 111 ntBASIC0.59□□□□□ -2.31
RTF1Q92541 AC140658.3-201ENST00000567603 271 ntBASIC0.59□□□□□ -2.31
RTF1Q92541 MIR6086-201ENST00000638065 55 ntBASIC0.59□□□□□ -2.31
RTF1Q92541 RNU5F-1-201ENST00000362507 117 ntBASIC0.58□□□□□ -2.32
RTF1Q92541 Y_RNA.258-201ENST00000364613 105 ntBASIC0.58□□□□□ -2.32
RTF1Q92541 AC022137.1-201ENST00000483735 151 ntBASIC0.58□□□□□ -2.32
RTF1Q92541 FGF7P7-201ENST00000514120 227 ntBASIC0.58□□□□□ -2.32
RTF1Q92541 SNORA62.5-201ENST00000516634 120 ntBASIC0.58□□□□□ -2.32
RTF1Q92541 MIR548O2-201ENST00000616090 70 ntBASIC0.58□□□□□ -2.32
RTF1Q92541 RNU6-1152P-201ENST00000384576 107 ntBASIC0.57□□□□□ -2.32
RTF1Q92541 MT-TY-201ENST00000387409 66 ntBASIC0.57□□□□□ -2.32
RTF1Q92541 SNORA26.2-201ENST00000390922 122 ntBASIC0.57□□□□□ -2.32
RTF1Q92541 Y_RNA.607-201ENST00000410597 98 ntBASIC0.57□□□□□ -2.32
RTF1Q92541 RNU7-171P-201ENST00000459581 62 ntBASIC0.57□□□□□ -2.32
RTF1Q92541 NAMPTP3-201ENST00000569273 224 ntBASIC0.57□□□□□ -2.32
RTF1Q92541 MIR4460-201ENST00000577862 86 ntBASIC0.57□□□□□ -2.32
RTF1Q92541 AC243829.6-201ENST00000612652 106 ntBASIC0.57□□□□□ -2.32
RTF1Q92541 AC069503.3-201ENST00000618674 145 ntBASIC0.57□□□□□ -2.32
RTF1Q92541 SNORD44.1-201ENST00000363202 61 ntBASIC0.56□□□□□ -2.32
RTF1Q92541 RNU6-624P-201ENST00000363411 107 ntBASIC0.56□□□□□ -2.32
RTF1Q92541 RNU6-242P-201ENST00000384359 107 ntBASIC0.56□□□□□ -2.32
RTF1Q92541 SNORD90-201ENST00000391145 111 ntBASIC0.56□□□□□ -2.32
RTF1Q92541 MIR1197-201ENST00000408818 88 ntBASIC0.56□□□□□ -2.32
RTF1Q92541 RNY4P29-201ENST00000410801 97 ntBASIC0.56□□□□□ -2.32
RTF1Q92541 MIR3140-201ENST00000583685 90 ntBASIC0.56□□□□□ -2.32
RTF1Q92541 RNU1-29P-201ENST00000606574 126 ntBASIC0.56□□□□□ -2.32
RTF1Q92541 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms