Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MIR644A-201ENST00000385262 94 ntBASIC0.99□□□□□ -2.25
SIMC1Q8NDZ2 AC074348.1-201ENST00000426503 132 ntBASIC0.99□□□□□ -2.25
SIMC1Q8NDZ2 RNU6-523P-201ENST00000516304 54 ntBASIC0.99□□□□□ -2.25
SIMC1Q8NDZ2 RNU7-13P-201ENST00000516413 62 ntBASIC0.99□□□□□ -2.25
SIMC1Q8NDZ2 RNU6-807P-201ENST00000516805 107 ntBASIC0.99□□□□□ -2.25
SIMC1Q8NDZ2 MIR3920-201ENST00000581751 86 ntBASIC0.99□□□□□ -2.25
SIMC1Q8NDZ2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.99□□□□□ -2.25
SIMC1Q8NDZ2 MIR1297-201ENST00000637311 77 ntBASIC0.99□□□□□ -2.25
SIMC1Q8NDZ2 Y_RNA.545-201ENST00000384652 105 ntBASIC0.98□□□□□ -2.25
SIMC1Q8NDZ2 AC073261.1-201ENST00000429409 121 ntBASIC0.98□□□□□ -2.25
SIMC1Q8NDZ2 MIR5000-201ENST00000577717 103 ntBASIC0.98□□□□□ -2.25
SIMC1Q8NDZ2 MIR548AG2-201ENST00000581228 64 ntBASIC0.98□□□□□ -2.25
SIMC1Q8NDZ2 MIR6767-201ENST00000637302 66 ntBASIC0.98□□□□□ -2.25
SIMC1Q8NDZ2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
SIMC1Q8NDZ2 Y_RNA.371-201ENST00000365591 113 ntBASIC0.97□□□□□ -2.25
SIMC1Q8NDZ2 RNU6-1126P-201ENST00000384002 107 ntBASIC0.97□□□□□ -2.25
SIMC1Q8NDZ2 MIR216A-201ENST00000385063 110 ntBASIC0.97□□□□□ -2.25
SIMC1Q8NDZ2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SIMC1Q8NDZ2 MIR2113-201ENST00000459007 91 ntBASIC0.97□□□□□ -2.25
SIMC1Q8NDZ2 RNU7-104P-201ENST00000459398 79 ntBASIC0.97□□□□□ -2.25
SIMC1Q8NDZ2 RNU6-1057P-201ENST00000517162 102 ntBASIC0.97□□□□□ -2.25
SIMC1Q8NDZ2 RNU6-340P-201ENST00000364005 107 ntBASIC0.96□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.96□□□□□ -2.26
SIMC1Q8NDZ2 AC211469.2-201ENST00000605461 205 ntBASIC0.96□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-824P-201ENST00000363724 104 ntBASIC0.95□□□□□ -2.26
SIMC1Q8NDZ2 MIR608-201ENST00000384820 100 ntBASIC0.95□□□□□ -2.26
SIMC1Q8NDZ2 U3.27-201ENST00000391237 200 ntBASIC0.95□□□□□ -2.26
SIMC1Q8NDZ2 RNU2-59P-201ENST00000410482 191 ntBASIC0.95□□□□□ -2.26
SIMC1Q8NDZ2 AC097510.1-201ENST00000510945 133 ntBASIC0.95□□□□□ -2.26
SIMC1Q8NDZ2 AC067863.3-201ENST00000624172 122 ntBASIC0.95□□□□□ -2.26
SIMC1Q8NDZ2 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-411P-201ENST00000384451 107 ntBASIC0.94□□□□□ -2.26
SIMC1Q8NDZ2 SNORD28-201ENST00000384706 75 ntBASIC0.94□□□□□ -2.26
SIMC1Q8NDZ2 MIR573-201ENST00000384964 99 ntBASIC0.94□□□□□ -2.26
SIMC1Q8NDZ2 Y_RNA.606-201ENST00000410579 103 ntBASIC0.94□□□□□ -2.26
SIMC1Q8NDZ2 AC139453.2-201ENST00000487255 133 ntBASIC0.94□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-70P-201ENST00000516438 60 ntBASIC0.94□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-135P-201ENST00000516769 101 ntBASIC0.94□□□□□ -2.26
SIMC1Q8NDZ2 MIR4639-201ENST00000584938 69 ntBASIC0.94□□□□□ -2.26
SIMC1Q8NDZ2 AC244669.1-204ENST00000621564 178 ntBASIC0.94□□□□□ -2.26
SIMC1Q8NDZ2 MIR664A-201ENST00000626086 82 ntBASIC0.94□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-330P-201ENST00000363015 107 ntBASIC0.93□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-154P-201ENST00000384306 106 ntBASIC0.93□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-469P-201ENST00000516253 101 ntBASIC0.93□□□□□ -2.26
SIMC1Q8NDZ2 MIR3612-201ENST00000579753 87 ntBASIC0.93□□□□□ -2.26
SIMC1Q8NDZ2 SNORD18A-201ENST00000363753 72 ntBASIC0.92□□□□□ -2.26
SIMC1Q8NDZ2 MIR617-201ENST00000385030 97 ntBASIC0.92□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-1177P-201ENST00000391058 104 ntBASIC0.92□□□□□ -2.26
SIMC1Q8NDZ2 Y_RNA.681-201ENST00000516445 113 ntBASIC0.92□□□□□ -2.26
SIMC1Q8NDZ2 MIR3678-201ENST00000578455 94 ntBASIC0.92□□□□□ -2.26
SIMC1Q8NDZ2 U6.81-201ENST00000612550 106 ntBASIC0.92□□□□□ -2.26
SIMC1Q8NDZ2 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-681P-201ENST00000364012 104 ntBASIC0.91□□□□□ -2.26
SIMC1Q8NDZ2 Y_RNA.258-201ENST00000364613 105 ntBASIC0.91□□□□□ -2.26
SIMC1Q8NDZ2 MIR519E-201ENST00000385075 84 ntBASIC0.91□□□□□ -2.26
SIMC1Q8NDZ2 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
SIMC1Q8NDZ2 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-687P-201ENST00000516443 89 ntBASIC0.91□□□□□ -2.26
SIMC1Q8NDZ2 RNU6-1015P-201ENST00000517121 99 ntBASIC0.91□□□□□ -2.26
SIMC1Q8NDZ2 AL353765.1-201ENST00000605514 183 ntBASIC0.91□□□□□ -2.26
SIMC1Q8NDZ2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SIMC1Q8NDZ2 SNORA8.1-201ENST00000384250 140 ntBASIC0.9□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-110P-201ENST00000384508 104 ntBASIC0.9□□□□□ -2.27
SIMC1Q8NDZ2 SNORD41.1-201ENST00000391000 69 ntBASIC0.9□□□□□ -2.27
SIMC1Q8NDZ2 RNA5SP47-201ENST00000517230 109 ntBASIC0.9□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-382P-201ENST00000365181 106 ntBASIC0.89□□□□□ -2.27
SIMC1Q8NDZ2 SNORD99-201ENST00000408612 74 ntBASIC0.89□□□□□ -2.27
SIMC1Q8NDZ2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
SIMC1Q8NDZ2 PSMC1P5-201ENST00000512850 177 ntBASIC0.89□□□□□ -2.27
SIMC1Q8NDZ2 RNA5SP436-201ENST00000516020 115 ntBASIC0.89□□□□□ -2.27
SIMC1Q8NDZ2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
SIMC1Q8NDZ2 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.89□□□□□ -2.27
SIMC1Q8NDZ2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-726P-201ENST00000364680 107 ntBASIC0.88□□□□□ -2.27
SIMC1Q8NDZ2 MIR193B-201ENST00000384907 83 ntBASIC0.88□□□□□ -2.27
SIMC1Q8NDZ2 MIR216B-201ENST00000390186 82 ntBASIC0.88□□□□□ -2.27
SIMC1Q8NDZ2 CYP3A137P-201ENST00000562436 69 ntBASIC0.88□□□□□ -2.27
SIMC1Q8NDZ2 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
SIMC1Q8NDZ2 MIR3675-201ENST00000583661 73 ntBASIC0.88□□□□□ -2.27
SIMC1Q8NDZ2 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
SIMC1Q8NDZ2 MIR4773-1-201ENST00000637203 78 ntBASIC0.88□□□□□ -2.27
SIMC1Q8NDZ2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-716P-201ENST00000365621 103 ntBASIC0.87□□□□□ -2.27
SIMC1Q8NDZ2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
SIMC1Q8NDZ2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-587P-201ENST00000391282 106 ntBASIC0.87□□□□□ -2.27
SIMC1Q8NDZ2 MIR548L-201ENST00000408303 86 ntBASIC0.87□□□□□ -2.27
SIMC1Q8NDZ2 AC244098.3-201ENST00000424803 96 ntBASIC0.87□□□□□ -2.27
SIMC1Q8NDZ2 AC011195.1-201ENST00000578177 177 ntBASIC0.87□□□□□ -2.27
SIMC1Q8NDZ2 MIR548O2-201ENST00000616090 70 ntBASIC0.87□□□□□ -2.27
SIMC1Q8NDZ2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.87□□□□□ -2.27
SIMC1Q8NDZ2 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-1241P-201ENST00000384536 107 ntBASIC0.86□□□□□ -2.27
SIMC1Q8NDZ2 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
SIMC1Q8NDZ2 RNU7-74P-201ENST00000459104 62 ntBASIC0.86□□□□□ -2.27
SIMC1Q8NDZ2 AC114801.3-201ENST00000510231 177 ntBASIC0.86□□□□□ -2.27
SIMC1Q8NDZ2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.86□□□□□ -2.27
SIMC1Q8NDZ2 MIR1273G-201ENST00000577677 100 ntBASIC0.86□□□□□ -2.27
SIMC1Q8NDZ2 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms