Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 MIR3613-201ENST00000579844 87 ntBASIC-0.61□□□□□ -2.51
PRPF39Q86UA1 MIR4280-201ENST00000582178 76 ntBASIC-0.61□□□□□ -2.51
PRPF39Q86UA1 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.62□□□□□ -2.51
PRPF39Q86UA1 MIR577-201ENST00000385196 96 ntBASIC-0.62□□□□□ -2.51
PRPF39Q86UA1 MIR548E-201ENST00000408287 88 ntBASIC-0.62□□□□□ -2.51
PRPF39Q86UA1 RNU6-935P-201ENST00000410371 100 ntBASIC-0.62□□□□□ -2.51
PRPF39Q86UA1 MTND4LP9-201ENST00000427694 174 ntBASIC-0.62□□□□□ -2.51
PRPF39Q86UA1 SNORD38.3-201ENST00000516599 73 ntBASIC-0.62□□□□□ -2.51
PRPF39Q86UA1 AC108676.2-201ENST00000605225 163 ntBASIC-0.62□□□□□ -2.51
PRPF39Q86UA1 SNORD115-25-201ENST00000362619 82 ntBASIC-0.63□□□□□ -2.51
PRPF39Q86UA1 RNA5SP368-201ENST00000364298 116 ntBASIC-0.63□□□□□ -2.51
PRPF39Q86UA1 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.63□□□□□ -2.51
PRPF39Q86UA1 RNU6-900P-201ENST00000384498 102 ntBASIC-0.63□□□□□ -2.51
PRPF39Q86UA1 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.63□□□□□ -2.51
PRPF39Q86UA1 AL035470.1-201ENST00000622571 220 ntBASIC-0.63□□□□□ -2.51
PRPF39Q86UA1 AL157777.2-201ENST00000258070 137 ntBASIC-0.64□□□□□ -2.51
PRPF39Q86UA1 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.64□□□□□ -2.51
PRPF39Q86UA1 RNU6-901P-201ENST00000384593 106 ntBASIC-0.64□□□□□ -2.51
PRPF39Q86UA1 SNORA3B-201ENST00000391305 131 ntBASIC-0.64□□□□□ -2.51
PRPF39Q86UA1 RNU7-85P-201ENST00000458851 63 ntBASIC-0.64□□□□□ -2.51
PRPF39Q86UA1 RNU6-772P-201ENST00000516042 105 ntBASIC-0.64□□□□□ -2.51
PRPF39Q86UA1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.64□□□□□ -2.51
PRPF39Q86UA1 AC093726.3-201ENST00000637588 150 ntBASIC-0.64□□□□□ -2.51
PRPF39Q86UA1 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.65□□□□□ -2.51
PRPF39Q86UA1 RNU7-55P-201ENST00000459426 62 ntBASIC-0.65□□□□□ -2.51
PRPF39Q86UA1 MIR5704-201ENST00000584029 77 ntBASIC-0.65□□□□□ -2.51
PRPF39Q86UA1 AC090425.1-201ENST00000610007 140 ntBASIC-0.65□□□□□ -2.51
PRPF39Q86UA1 MIR548AZ-201ENST00000616567 95 ntBASIC-0.65□□□□□ -2.51
PRPF39Q86UA1 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.66□□□□□ -2.52
PRPF39Q86UA1 RNU6-132P-201ENST00000383863 107 ntBASIC-0.66□□□□□ -2.52
PRPF39Q86UA1 RNU6-476P-201ENST00000384726 107 ntBASIC-0.66□□□□□ -2.52
PRPF39Q86UA1 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.66□□□□□ -2.52
PRPF39Q86UA1 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.66□□□□□ -2.52
PRPF39Q86UA1 FGF7P7-201ENST00000514120 227 ntBASIC-0.66□□□□□ -2.52
PRPF39Q86UA1 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.66□□□□□ -2.52
PRPF39Q86UA1 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.66□□□□□ -2.52
PRPF39Q86UA1 SNORD95.1-201ENST00000364099 68 ntBASIC-0.67□□□□□ -2.52
PRPF39Q86UA1 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.67□□□□□ -2.52
PRPF39Q86UA1 RNU7-200P-201ENST00000516105 62 ntBASIC-0.67□□□□□ -2.52
PRPF39Q86UA1 AL391099.1-201ENST00000624635 187 ntBASIC-0.67□□□□□ -2.52
PRPF39Q86UA1 RNY4P3-201ENST00000365254 95 ntBASIC-0.68□□□□□ -2.52
PRPF39Q86UA1 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.68□□□□□ -2.52
PRPF39Q86UA1 SNORD50.2-201ENST00000365465 70 ntBASIC-0.68□□□□□ -2.52
PRPF39Q86UA1 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.68□□□□□ -2.52
PRPF39Q86UA1 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.68□□□□□ -2.52
PRPF39Q86UA1 AL513043.2-201ENST00000573941 143 ntBASIC-0.68□□□□□ -2.52
PRPF39Q86UA1 MIR4694-201ENST00000578534 80 ntBASIC-0.68□□□□□ -2.52
PRPF39Q86UA1 MIR3140-201ENST00000583685 90 ntBASIC-0.68□□□□□ -2.52
PRPF39Q86UA1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.68□□□□□ -2.52
PRPF39Q86UA1 MIR8068-201ENST00000618032 68 ntBASIC-0.68□□□□□ -2.52
PRPF39Q86UA1 RPS29P8-201ENST00000445109 171 ntBASIC-0.69□□□□□ -2.52
PRPF39Q86UA1 RNU7-107P-201ENST00000459121 61 ntBASIC-0.69□□□□□ -2.52
PRPF39Q86UA1 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.69□□□□□ -2.52
PRPF39Q86UA1 MIR4536-1-201ENST00000583537 88 ntBASIC-0.69□□□□□ -2.52
PRPF39Q86UA1 MIR6851-201ENST00000617060 67 ntBASIC-0.69□□□□□ -2.52
PRPF39Q86UA1 RNU6-502P-201ENST00000362419 108 ntBASIC-0.7□□□□□ -2.52
PRPF39Q86UA1 RNU6-832P-201ENST00000363319 107 ntBASIC-0.7□□□□□ -2.52
PRPF39Q86UA1 MIR204-201ENST00000385200 110 ntBASIC-0.7□□□□□ -2.52
PRPF39Q86UA1 RNU6-65P-201ENST00000516332 98 ntBASIC-0.7□□□□□ -2.52
PRPF39Q86UA1 MIR548Z-201ENST00000584743 97 ntBASIC-0.7□□□□□ -2.52
PRPF39Q86UA1 RNU6-257P-201ENST00000410238 98 ntBASIC-0.71□□□□□ -2.52
PRPF39Q86UA1 snoU13.19-201ENST00000459148 104 ntBASIC-0.71□□□□□ -2.52
PRPF39Q86UA1 SNORD114-14-201ENST00000362723 75 ntBASIC-0.72□□□□□ -2.52
PRPF39Q86UA1 SNORD114-15-201ENST00000364687 72 ntBASIC-0.72□□□□□ -2.52
PRPF39Q86UA1 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.72□□□□□ -2.52
PRPF39Q86UA1 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.72□□□□□ -2.52
PRPF39Q86UA1 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.72□□□□□ -2.52
PRPF39Q86UA1 MIR224-201ENST00000384889 81 ntBASIC-0.72□□□□□ -2.52
PRPF39Q86UA1 SNORD90-201ENST00000391145 111 ntBASIC-0.72□□□□□ -2.52
PRPF39Q86UA1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.72□□□□□ -2.52
PRPF39Q86UA1 RNU6-721P-201ENST00000410155 105 ntBASIC-0.72□□□□□ -2.52
PRPF39Q86UA1 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.72□□□□□ -2.52
PRPF39Q86UA1 MIR4679-2-201ENST00000578358 77 ntBASIC-0.72□□□□□ -2.52
PRPF39Q86UA1 RNY3P2-201ENST00000362918 102 ntBASIC-0.73□□□□□ -2.53
PRPF39Q86UA1 RNU6-990P-201ENST00000364385 104 ntBASIC-0.73□□□□□ -2.53
PRPF39Q86UA1 AC103810.7-201ENST00000607821 91 ntBASIC-0.73□□□□□ -2.53
PRPF39Q86UA1 RNU6-973P-201ENST00000364690 107 ntBASIC-0.74□□□□□ -2.53
PRPF39Q86UA1 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.74□□□□□ -2.53
PRPF39Q86UA1 U3.27-201ENST00000391237 200 ntBASIC-0.74□□□□□ -2.53
PRPF39Q86UA1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.74□□□□□ -2.53
PRPF39Q86UA1 RNU6-346P-201ENST00000516288 111 ntBASIC-0.74□□□□□ -2.53
PRPF39Q86UA1 SNORA40.17-201ENST00000517256 115 ntBASIC-0.74□□□□□ -2.53
PRPF39Q86UA1 AC068339.1-201ENST00000526965 141 ntBASIC-0.74□□□□□ -2.53
PRPF39Q86UA1 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.75□□□□□ -2.53
PRPF39Q86UA1 RNU6-337P-201ENST00000391243 106 ntBASIC-0.75□□□□□ -2.53
PRPF39Q86UA1 MIR3064-201ENST00000581130 66 ntBASIC-0.75□□□□□ -2.53
PRPF39Q86UA1 MIR548A1-201ENST00000385041 97 ntBASIC-0.76□□□□□ -2.53
PRPF39Q86UA1 SNORD22.1-201ENST00000516331 125 ntBASIC-0.76□□□□□ -2.53
PRPF39Q86UA1 MIR6773-201ENST00000612812 74 ntBASIC-0.76□□□□□ -2.53
PRPF39Q86UA1 SNORA24B-201ENST00000384176 131 ntBASIC-0.77□□□□□ -2.53
PRPF39Q86UA1 RNU6-905P-201ENST00000384434 107 ntBASIC-0.77□□□□□ -2.53
PRPF39Q86UA1 RNA5SP292-201ENST00000390974 118 ntBASIC-0.77□□□□□ -2.53
PRPF39Q86UA1 SNORD33.1-201ENST00000516213 88 ntBASIC-0.77□□□□□ -2.53
PRPF39Q86UA1 RNU6-795P-201ENST00000516323 103 ntBASIC-0.77□□□□□ -2.53
PRPF39Q86UA1 RNU6-971P-201ENST00000516920 106 ntBASIC-0.77□□□□□ -2.53
PRPF39Q86UA1 SNORA63.2-201ENST00000362603 126 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 RNU6-495P-201ENST00000362995 107 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 SNORD114-4-201ENST00000363962 75 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms