Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 MIR5706-201ENST00000579841 80 ntBASIC0.38□□□□□ -2.35
KRT28Q7Z3Y7 MIR4696-201ENST00000581431 70 ntBASIC0.38□□□□□ -2.35
KRT28Q7Z3Y7 SNORD116-10-201ENST00000363791 102 ntBASIC0.37□□□□□ -2.35
KRT28Q7Z3Y7 Z95118.1-201ENST00000421372 247 ntBASIC0.37□□□□□ -2.35
KRT28Q7Z3Y7 AC073261.1-201ENST00000429409 121 ntBASIC0.37□□□□□ -2.35
KRT28Q7Z3Y7 MIR2113-201ENST00000459007 91 ntBASIC0.37□□□□□ -2.35
KRT28Q7Z3Y7 RNU6-287P-201ENST00000516230 98 ntBASIC0.37□□□□□ -2.35
KRT28Q7Z3Y7 RNU6-509P-201ENST00000363519 107 ntBASIC0.36□□□□□ -2.35
KRT28Q7Z3Y7 Y_RNA.207-201ENST00000364142 106 ntBASIC0.36□□□□□ -2.35
KRT28Q7Z3Y7 Y_RNA.348-201ENST00000365403 103 ntBASIC0.36□□□□□ -2.35
KRT28Q7Z3Y7 SNORD4B-201ENST00000459083 72 ntBASIC0.36□□□□□ -2.35
KRT28Q7Z3Y7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.36□□□□□ -2.35
KRT28Q7Z3Y7 RNU6-664P-201ENST00000362381 107 ntBASIC0.35□□□□□ -2.35
KRT28Q7Z3Y7 SNORD101-201ENST00000384027 73 ntBASIC0.35□□□□□ -2.35
KRT28Q7Z3Y7 SNORA70.25-201ENST00000612741 95 ntBASIC0.35□□□□□ -2.35
KRT28Q7Z3Y7 MIR2052-201ENST00000636055 55 ntBASIC0.35□□□□□ -2.35
KRT28Q7Z3Y7 RNU6-32P-201ENST00000383948 107 ntBASIC0.34□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-13P-201ENST00000384248 107 ntBASIC0.34□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-12P-201ENST00000384604 107 ntBASIC0.34□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-41P-201ENST00000384741 107 ntBASIC0.34□□□□□ -2.36
KRT28Q7Z3Y7 RNU7-129P-201ENST00000516128 62 ntBASIC0.34□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-65P-201ENST00000516332 98 ntBASIC0.34□□□□□ -2.36
KRT28Q7Z3Y7 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
KRT28Q7Z3Y7 MIR4536-1-201ENST00000583537 88 ntBASIC0.34□□□□□ -2.36
KRT28Q7Z3Y7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
KRT28Q7Z3Y7 RNU1-141P-201ENST00000364623 158 ntBASIC0.33□□□□□ -2.36
KRT28Q7Z3Y7 MIR760-201ENST00000390220 80 ntBASIC0.33□□□□□ -2.36
KRT28Q7Z3Y7 RNA5SP484-201ENST00000458857 111 ntBASIC0.33□□□□□ -2.36
KRT28Q7Z3Y7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.33□□□□□ -2.36
KRT28Q7Z3Y7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.33□□□□□ -2.36
KRT28Q7Z3Y7 U7.3-201ENST00000616123 62 ntBASIC0.33□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-640P-201ENST00000363693 105 ntBASIC0.32□□□□□ -2.36
KRT28Q7Z3Y7 Y_RNA.185-201ENST00000363894 100 ntBASIC0.32□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-153P-201ENST00000364422 104 ntBASIC0.32□□□□□ -2.36
KRT28Q7Z3Y7 Y_RNA.290-201ENST00000364879 114 ntBASIC0.32□□□□□ -2.36
KRT28Q7Z3Y7 Y_RNA.495-201ENST00000384435 112 ntBASIC0.32□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-1057P-201ENST00000517162 102 ntBASIC0.32□□□□□ -2.36
KRT28Q7Z3Y7 SNORA9.1-201ENST00000362412 131 ntBASIC0.31□□□□□ -2.36
KRT28Q7Z3Y7 Y_RNA.81-201ENST00000362997 102 ntBASIC0.31□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-815P-201ENST00000384080 113 ntBASIC0.31□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-905P-201ENST00000384434 107 ntBASIC0.31□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-935P-201ENST00000410371 100 ntBASIC0.31□□□□□ -2.36
KRT28Q7Z3Y7 SNORA40.13-201ENST00000516379 120 ntBASIC0.31□□□□□ -2.36
KRT28Q7Z3Y7 AC069113.3-201ENST00000521019 150 ntBASIC0.31□□□□□ -2.36
KRT28Q7Z3Y7 RNA5SP128-201ENST00000365305 116 ntBASIC0.3□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-132P-201ENST00000383863 107 ntBASIC0.3□□□□□ -2.36
KRT28Q7Z3Y7 SNORD110-201ENST00000408189 75 ntBASIC0.3□□□□□ -2.36
KRT28Q7Z3Y7 AC006210.1-201ENST00000424882 111 ntBASIC0.3□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-758P-201ENST00000516292 89 ntBASIC0.3□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-1232P-201ENST00000516299 86 ntBASIC0.3□□□□□ -2.36
KRT28Q7Z3Y7 NAMPTP3-201ENST00000569273 224 ntBASIC0.3□□□□□ -2.36
KRT28Q7Z3Y7 MIR3064-201ENST00000581130 66 ntBASIC0.29□□□□□ -2.36
KRT28Q7Z3Y7 U7.6-201ENST00000610841 64 ntBASIC0.29□□□□□ -2.36
KRT28Q7Z3Y7 RNA5SP98-201ENST00000363158 137 ntBASIC0.28□□□□□ -2.36
KRT28Q7Z3Y7 Y_RNA.239-201ENST00000364444 113 ntBASIC0.28□□□□□ -2.36
KRT28Q7Z3Y7 MIR501-201ENST00000390204 84 ntBASIC0.28□□□□□ -2.36
KRT28Q7Z3Y7 RNU6-519P-201ENST00000410590 108 ntBASIC0.28□□□□□ -2.36
KRT28Q7Z3Y7 MIR548AD-201ENST00000584780 82 ntBASIC0.28□□□□□ -2.36
KRT28Q7Z3Y7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.28□□□□□ -2.36
KRT28Q7Z3Y7 AC069503.3-201ENST00000618674 145 ntBASIC0.28□□□□□ -2.36
KRT28Q7Z3Y7 SNORD114-15-201ENST00000364687 72 ntBASIC0.27□□□□□ -2.37
KRT28Q7Z3Y7 MT-TY-201ENST00000387409 66 ntBASIC0.27□□□□□ -2.37
KRT28Q7Z3Y7 HMGN2P22-201ENST00000427588 175 ntBASIC0.27□□□□□ -2.37
KRT28Q7Z3Y7 AC104996.3-201ENST00000590718 94 ntBASIC0.27□□□□□ -2.37
KRT28Q7Z3Y7 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
KRT28Q7Z3Y7 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
KRT28Q7Z3Y7 MIRLET7F1-201ENST00000362202 87 ntBASIC0.26□□□□□ -2.37
KRT28Q7Z3Y7 Y_RNA.190-201ENST00000363964 101 ntBASIC0.26□□□□□ -2.37
KRT28Q7Z3Y7 MIR216B-201ENST00000390186 82 ntBASIC0.26□□□□□ -2.37
KRT28Q7Z3Y7 RNU6-162P-201ENST00000516228 103 ntBASIC0.26□□□□□ -2.37
KRT28Q7Z3Y7 AC026421.1-201ENST00000519101 163 ntBASIC0.26□□□□□ -2.37
KRT28Q7Z3Y7 MALAT1.1-201ENST00000618249 95 ntBASIC0.26□□□□□ -2.37
KRT28Q7Z3Y7 RNU6-161P-201ENST00000363051 106 ntBASIC0.25□□□□□ -2.37
KRT28Q7Z3Y7 Y_RNA.125-201ENST00000363371 111 ntBASIC0.25□□□□□ -2.37
KRT28Q7Z3Y7 SNORA42.1-201ENST00000363515 137 ntBASIC0.25□□□□□ -2.37
KRT28Q7Z3Y7 RNA5SP368-201ENST00000364298 116 ntBASIC0.25□□□□□ -2.37
KRT28Q7Z3Y7 U3.27-201ENST00000391237 200 ntBASIC0.25□□□□□ -2.37
KRT28Q7Z3Y7 RNU6-168P-201ENST00000516189 101 ntBASIC0.25□□□□□ -2.37
KRT28Q7Z3Y7 MIR4460-201ENST00000577862 86 ntBASIC0.25□□□□□ -2.37
KRT28Q7Z3Y7 MIR548O2-201ENST00000616090 70 ntBASIC0.25□□□□□ -2.37
KRT28Q7Z3Y7 MIR499B-201ENST00000636498 73 ntBASIC0.25□□□□□ -2.37
KRT28Q7Z3Y7 RNU6-811P-201ENST00000384069 107 ntBASIC0.24□□□□□ -2.37
KRT28Q7Z3Y7 MIR548U-201ENST00000390728 81 ntBASIC0.24□□□□□ -2.37
KRT28Q7Z3Y7 Y_RNA.677-201ENST00000516401 85 ntBASIC0.24□□□□□ -2.37
KRT28Q7Z3Y7 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
KRT28Q7Z3Y7 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.24□□□□□ -2.37
KRT28Q7Z3Y7 MIR488-201ENST00000365739 83 ntBASIC0.23□□□□□ -2.37
KRT28Q7Z3Y7 RNU6-127P-201ENST00000390897 107 ntBASIC0.23□□□□□ -2.37
KRT28Q7Z3Y7 RNA5SP89-201ENST00000410300 108 ntBASIC0.23□□□□□ -2.37
KRT28Q7Z3Y7 Y_RNA.609-201ENST00000410669 89 ntBASIC0.23□□□□□ -2.37
KRT28Q7Z3Y7 IGLVI-20-201ENST00000519296 130 ntBASIC0.23□□□□□ -2.37
KRT28Q7Z3Y7 MIR4677-201ENST00000584153 80 ntBASIC0.23□□□□□ -2.37
KRT28Q7Z3Y7 MIR409-201ENST00000362237 79 ntBASIC0.22□□□□□ -2.37
KRT28Q7Z3Y7 MIR451A-201ENST00000385059 72 ntBASIC0.22□□□□□ -2.37
KRT28Q7Z3Y7 SNORA25.13-201ENST00000516395 103 ntBASIC0.22□□□□□ -2.37
KRT28Q7Z3Y7 RNU6-782P-201ENST00000516852 104 ntBASIC0.22□□□□□ -2.37
KRT28Q7Z3Y7 MIR4493-201ENST00000584016 73 ntBASIC0.22□□□□□ -2.37
KRT28Q7Z3Y7 Y_RNA.491-201ENST00000384417 107 ntBASIC0.21□□□□□ -2.38
KRT28Q7Z3Y7 RNA5SP292-201ENST00000390974 118 ntBASIC0.21□□□□□ -2.38
KRT28Q7Z3Y7 MIR548H2-201ENST00000408874 88 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms