Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNY1P8-201ENST00000383970 114 ntBASIC0.93□□□□□ -2.26
KRT40Q6A162 Y_RNA.437-201ENST00000384113 113 ntBASIC0.93□□□□□ -2.26
KRT40Q6A162 RNU6-1275P-201ENST00000391087 107 ntBASIC0.93□□□□□ -2.26
KRT40Q6A162 RNU6-135P-201ENST00000516769 101 ntBASIC0.93□□□□□ -2.26
KRT40Q6A162 RNU6-624P-201ENST00000363411 107 ntBASIC0.92□□□□□ -2.26
KRT40Q6A162 SNORD115-37-201ENST00000363768 82 ntBASIC0.92□□□□□ -2.26
KRT40Q6A162 Y_RNA.239-201ENST00000364444 113 ntBASIC0.92□□□□□ -2.26
KRT40Q6A162 RNU6-1126P-201ENST00000384002 107 ntBASIC0.92□□□□□ -2.26
KRT40Q6A162 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.92□□□□□ -2.26
KRT40Q6A162 RNU6-469P-201ENST00000516253 101 ntBASIC0.92□□□□□ -2.26
KRT40Q6A162 RNU7-13P-201ENST00000516413 62 ntBASIC0.92□□□□□ -2.26
KRT40Q6A162 MIR3202-2-201ENST00000635980 79 ntBASIC0.92□□□□□ -2.26
KRT40Q6A162 SNORA36.1-201ENST00000363424 132 ntBASIC0.91□□□□□ -2.26
KRT40Q6A162 MIR1197-201ENST00000408818 88 ntBASIC0.91□□□□□ -2.26
KRT40Q6A162 RNA5SP193-201ENST00000410353 107 ntBASIC0.91□□□□□ -2.26
KRT40Q6A162 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
KRT40Q6A162 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.91□□□□□ -2.26
KRT40Q6A162 RNU6-478P-201ENST00000363904 110 ntBASIC0.9□□□□□ -2.27
KRT40Q6A162 RNU6-652P-201ENST00000365488 107 ntBASIC0.9□□□□□ -2.27
KRT40Q6A162 MIR1255A-201ENST00000408338 113 ntBASIC0.9□□□□□ -2.27
KRT40Q6A162 RNU6-935P-201ENST00000410371 100 ntBASIC0.9□□□□□ -2.27
KRT40Q6A162 RNA5SP225-201ENST00000410874 135 ntBASIC0.9□□□□□ -2.27
KRT40Q6A162 AL450471.1-201ENST00000447509 127 ntBASIC0.9□□□□□ -2.27
KRT40Q6A162 MIR2113-201ENST00000459007 91 ntBASIC0.9□□□□□ -2.27
KRT40Q6A162 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
KRT40Q6A162 MIR3140-201ENST00000583685 90 ntBASIC0.9□□□□□ -2.27
KRT40Q6A162 MIR6828-201ENST00000636181 60 ntBASIC0.9□□□□□ -2.27
KRT40Q6A162 MIR6086-201ENST00000638065 55 ntBASIC0.9□□□□□ -2.27
KRT40Q6A162 RNU6-726P-201ENST00000364680 107 ntBASIC0.89□□□□□ -2.27
KRT40Q6A162 SNORD115-44-201ENST00000365391 82 ntBASIC0.89□□□□□ -2.27
KRT40Q6A162 RNU6-1051P-201ENST00000365471 102 ntBASIC0.89□□□□□ -2.27
KRT40Q6A162 SNORD41.1-201ENST00000391000 69 ntBASIC0.89□□□□□ -2.27
KRT40Q6A162 RNA5SP222-201ENST00000411039 105 ntBASIC0.89□□□□□ -2.27
KRT40Q6A162 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
KRT40Q6A162 SCARNA16.5-201ENST00000517114 183 ntBASIC0.89□□□□□ -2.27
KRT40Q6A162 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.89□□□□□ -2.27
KRT40Q6A162 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.89□□□□□ -2.27
KRT40Q6A162 AC067863.3-201ENST00000624172 122 ntBASIC0.89□□□□□ -2.27
KRT40Q6A162 MIR330-201ENST00000362196 94 ntBASIC0.88□□□□□ -2.27
KRT40Q6A162 RNU6-1229P-201ENST00000364295 107 ntBASIC0.88□□□□□ -2.27
KRT40Q6A162 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
KRT40Q6A162 MIR508-201ENST00000384857 115 ntBASIC0.88□□□□□ -2.27
KRT40Q6A162 MIR451A-201ENST00000385059 72 ntBASIC0.88□□□□□ -2.27
KRT40Q6A162 snoU13.17-201ENST00000458802 104 ntBASIC0.88□□□□□ -2.27
KRT40Q6A162 RNA5SP94-201ENST00000516917 108 ntBASIC0.88□□□□□ -2.27
KRT40Q6A162 SNORA63.2-201ENST00000362603 126 ntBASIC0.87□□□□□ -2.27
KRT40Q6A162 Y_RNA.94-201ENST00000363068 106 ntBASIC0.87□□□□□ -2.27
KRT40Q6A162 SNORA24B-201ENST00000384176 131 ntBASIC0.87□□□□□ -2.27
KRT40Q6A162 MIR519E-201ENST00000385075 84 ntBASIC0.87□□□□□ -2.27
KRT40Q6A162 MIR4712-201ENST00000583750 82 ntBASIC0.86□□□□□ -2.27
KRT40Q6A162 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
KRT40Q6A162 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
KRT40Q6A162 RNU4-45P-201ENST00000365469 141 ntBASIC0.85□□□□□ -2.27
KRT40Q6A162 RNU6-1052P-201ENST00000411398 104 ntBASIC0.85□□□□□ -2.27
KRT40Q6A162 AC098934.3-201ENST00000430450 190 ntBASIC0.85□□□□□ -2.27
KRT40Q6A162 FGF7P7-201ENST00000514120 227 ntBASIC0.85□□□□□ -2.27
KRT40Q6A162 Y_RNA.685-201ENST00000516532 108 ntBASIC0.85□□□□□ -2.27
KRT40Q6A162 RNU6-719P-201ENST00000516671 104 ntBASIC0.85□□□□□ -2.27
KRT40Q6A162 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.85□□□□□ -2.27
KRT40Q6A162 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
KRT40Q6A162 RNU6-161P-201ENST00000363051 106 ntBASIC0.84□□□□□ -2.27
KRT40Q6A162 MIR617-201ENST00000385030 97 ntBASIC0.84□□□□□ -2.27
KRT40Q6A162 RNU6-129P-201ENST00000391022 107 ntBASIC0.84□□□□□ -2.27
KRT40Q6A162 RNU6-1108P-201ENST00000516308 104 ntBASIC0.84□□□□□ -2.27
KRT40Q6A162 RNU6-557P-201ENST00000516842 110 ntBASIC0.84□□□□□ -2.27
KRT40Q6A162 MIR4711-201ENST00000578274 70 ntBASIC0.84□□□□□ -2.27
KRT40Q6A162 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
KRT40Q6A162 RNU6-279P-201ENST00000391297 101 ntBASIC0.83□□□□□ -2.28
KRT40Q6A162 MIR7107-201ENST00000611489 80 ntBASIC0.83□□□□□ -2.28
KRT40Q6A162 RNU6-269P-201ENST00000391077 97 ntBASIC0.82□□□□□ -2.28
KRT40Q6A162 AC093423.1-201ENST00000440817 142 ntBASIC0.82□□□□□ -2.28
KRT40Q6A162 RNA5SP268-201ENST00000516828 124 ntBASIC0.82□□□□□ -2.28
KRT40Q6A162 SNORA36.2-201ENST00000384004 127 ntBASIC0.81□□□□□ -2.28
KRT40Q6A162 Y_RNA.532-201ENST00000384590 113 ntBASIC0.81□□□□□ -2.28
KRT40Q6A162 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
KRT40Q6A162 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.81□□□□□ -2.28
KRT40Q6A162 MIR2909-201ENST00000617113 69 ntBASIC0.81□□□□□ -2.28
KRT40Q6A162 AL162376.1-201ENST00000624117 175 ntBASIC0.81□□□□□ -2.28
KRT40Q6A162 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.8□□□□□ -2.28
KRT40Q6A162 MIRLET7A1-201ENST00000362295 80 ntBASIC0.8□□□□□ -2.28
KRT40Q6A162 RNU6-315P-201ENST00000362666 107 ntBASIC0.8□□□□□ -2.28
KRT40Q6A162 RNA5SP517-201ENST00000364724 117 ntBASIC0.8□□□□□ -2.28
KRT40Q6A162 MIR140-201ENST00000385282 100 ntBASIC0.8□□□□□ -2.28
KRT40Q6A162 SNORD77.2-201ENST00000391045 68 ntBASIC0.8□□□□□ -2.28
KRT40Q6A162 MIR548L-201ENST00000408303 86 ntBASIC0.8□□□□□ -2.28
KRT40Q6A162 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.8□□□□□ -2.28
KRT40Q6A162 RNU6-857P-201ENST00000515893 110 ntBASIC0.8□□□□□ -2.28
KRT40Q6A162 RNA5SP227-201ENST00000516184 113 ntBASIC0.8□□□□□ -2.28
KRT40Q6A162 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.8□□□□□ -2.28
KRT40Q6A162 RNU6-208P-201ENST00000362431 107 ntBASIC0.79□□□□□ -2.28
KRT40Q6A162 SNORA8.2-201ENST00000384372 139 ntBASIC0.79□□□□□ -2.28
KRT40Q6A162 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
KRT40Q6A162 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
KRT40Q6A162 RNU6-1057P-201ENST00000517162 102 ntBASIC0.79□□□□□ -2.28
KRT40Q6A162 RNU5F-1-201ENST00000362507 117 ntBASIC0.78□□□□□ -2.28
KRT40Q6A162 RNU6-686P-201ENST00000364839 107 ntBASIC0.78□□□□□ -2.28
KRT40Q6A162 U3.27-201ENST00000391237 200 ntBASIC0.78□□□□□ -2.28
KRT40Q6A162 AL627230.5-201ENST00000619807 58 ntBASIC0.78□□□□□ -2.28
KRT40Q6A162 RNU6-824P-201ENST00000363724 104 ntBASIC0.77□□□□□ -2.29
KRT40Q6A162 RNA5SP484-201ENST00000458857 111 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 495.2 ms