Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RNU6-41P-201ENST00000384741 107 ntBASIC0.24□□□□□ -2.37
KRTCAP3Q53RY4 MIR760-201ENST00000390220 80 ntBASIC0.24□□□□□ -2.37
KRTCAP3Q53RY4 RNU6-519P-201ENST00000410590 108 ntBASIC0.24□□□□□ -2.37
KRTCAP3Q53RY4 SNORA40.13-201ENST00000516379 120 ntBASIC0.24□□□□□ -2.37
KRTCAP3Q53RY4 MIR2052-201ENST00000636055 55 ntBASIC0.24□□□□□ -2.37
KRTCAP3Q53RY4 SNORA9.1-201ENST00000362412 131 ntBASIC0.23□□□□□ -2.37
KRTCAP3Q53RY4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.23□□□□□ -2.37
KRTCAP3Q53RY4 RNA5SP63-201ENST00000391225 112 ntBASIC0.23□□□□□ -2.37
KRTCAP3Q53RY4 SNORD110-201ENST00000408189 75 ntBASIC0.23□□□□□ -2.37
KRTCAP3Q53RY4 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
KRTCAP3Q53RY4 MIR5706-201ENST00000579841 80 ntBASIC0.23□□□□□ -2.37
KRTCAP3Q53RY4 Y_RNA.81-201ENST00000362997 102 ntBASIC0.22□□□□□ -2.37
KRTCAP3Q53RY4 RNA5SP257-201ENST00000363023 116 ntBASIC0.22□□□□□ -2.37
KRTCAP3Q53RY4 RNU6-153P-201ENST00000364422 104 ntBASIC0.22□□□□□ -2.37
KRTCAP3Q53RY4 Y_RNA.239-201ENST00000364444 113 ntBASIC0.22□□□□□ -2.37
KRTCAP3Q53RY4 RNA5SP128-201ENST00000365305 116 ntBASIC0.22□□□□□ -2.37
KRTCAP3Q53RY4 RNU6-905P-201ENST00000384434 107 ntBASIC0.22□□□□□ -2.37
KRTCAP3Q53RY4 Y_RNA.609-201ENST00000410669 89 ntBASIC0.22□□□□□ -2.37
KRTCAP3Q53RY4 AC006210.1-201ENST00000424882 111 ntBASIC0.22□□□□□ -2.37
KRTCAP3Q53RY4 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
KRTCAP3Q53RY4 MIR499B-201ENST00000636498 73 ntBASIC0.22□□□□□ -2.37
KRTCAP3Q53RY4 RNU6-935P-201ENST00000410371 100 ntBASIC0.21□□□□□ -2.38
KRTCAP3Q53RY4 HMGN2P22-201ENST00000427588 175 ntBASIC0.21□□□□□ -2.38
KRTCAP3Q53RY4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.21□□□□□ -2.38
KRTCAP3Q53RY4 RNU6-640P-201ENST00000363693 105 ntBASIC0.2□□□□□ -2.38
KRTCAP3Q53RY4 MIR501-201ENST00000390204 84 ntBASIC0.2□□□□□ -2.38
KRTCAP3Q53RY4 RNU7-129P-201ENST00000516128 62 ntBASIC0.2□□□□□ -2.38
KRTCAP3Q53RY4 RNU6-168P-201ENST00000516189 101 ntBASIC0.2□□□□□ -2.38
KRTCAP3Q53RY4 MIR3064-201ENST00000581130 66 ntBASIC0.2□□□□□ -2.38
KRTCAP3Q53RY4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
KRTCAP3Q53RY4 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
KRTCAP3Q53RY4 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
KRTCAP3Q53RY4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.19□□□□□ -2.38
KRTCAP3Q53RY4 MIR488-201ENST00000365739 83 ntBASIC0.19□□□□□ -2.38
KRTCAP3Q53RY4 RNA5SP89-201ENST00000410300 108 ntBASIC0.19□□□□□ -2.38
KRTCAP3Q53RY4 Y_RNA.681-201ENST00000516445 113 ntBASIC0.19□□□□□ -2.38
KRTCAP3Q53RY4 RNU6-1057P-201ENST00000517162 102 ntBASIC0.19□□□□□ -2.38
KRTCAP3Q53RY4 MIR4460-201ENST00000577862 86 ntBASIC0.19□□□□□ -2.38
KRTCAP3Q53RY4 U7.6-201ENST00000610841 64 ntBASIC0.19□□□□□ -2.38
KRTCAP3Q53RY4 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.19□□□□□ -2.38
KRTCAP3Q53RY4 MIR451A-201ENST00000385059 72 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 MT-TY-201ENST00000387409 66 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 MIR548U-201ENST00000390728 81 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 RNU6-127P-201ENST00000390897 107 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 RNA5SP292-201ENST00000390974 118 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 RNU6-1052P-201ENST00000411398 104 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 Y_RNA.677-201ENST00000516401 85 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 RNU6-719P-201ENST00000516671 104 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 RNU5B-6P-201ENST00000516765 68 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 YWHAEP2-201ENST00000580066 112 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 AC104996.3-201ENST00000590718 94 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 MALAT1.1-201ENST00000618249 95 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 AC069503.3-201ENST00000618674 145 ntBASIC0.18□□□□□ -2.38
KRTCAP3Q53RY4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.17□□□□□ -2.38
KRTCAP3Q53RY4 RNU4-32P-201ENST00000363404 141 ntBASIC0.17□□□□□ -2.38
KRTCAP3Q53RY4 RNU6-811P-201ENST00000384069 107 ntBASIC0.17□□□□□ -2.38
KRTCAP3Q53RY4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.17□□□□□ -2.38
KRTCAP3Q53RY4 MIR4677-201ENST00000584153 80 ntBASIC0.17□□□□□ -2.38
KRTCAP3Q53RY4 MIR548AD-201ENST00000584780 82 ntBASIC0.17□□□□□ -2.38
KRTCAP3Q53RY4 Y_RNA.491-201ENST00000384417 107 ntBASIC0.16□□□□□ -2.38
KRTCAP3Q53RY4 SNORA18.5-201ENST00000516616 101 ntBASIC0.16□□□□□ -2.38
KRTCAP3Q53RY4 MIR548O2-201ENST00000616090 70 ntBASIC0.16□□□□□ -2.38
KRTCAP3Q53RY4 SNORD90-201ENST00000391145 111 ntBASIC0.15□□□□□ -2.39
KRTCAP3Q53RY4 U3.27-201ENST00000391237 200 ntBASIC0.15□□□□□ -2.39
KRTCAP3Q53RY4 FGF7P7-201ENST00000514120 227 ntBASIC0.15□□□□□ -2.39
KRTCAP3Q53RY4 MIR3140-201ENST00000583685 90 ntBASIC0.15□□□□□ -2.39
KRTCAP3Q53RY4 MIR3925-201ENST00000584674 77 ntBASIC0.15□□□□□ -2.39
KRTCAP3Q53RY4 MIR2909-201ENST00000617113 69 ntBASIC0.15□□□□□ -2.39
KRTCAP3Q53RY4 RNY1P7-201ENST00000384743 110 ntBASIC0.14□□□□□ -2.39
KRTCAP3Q53RY4 MIR643-201ENST00000385267 97 ntBASIC0.14□□□□□ -2.39
KRTCAP3Q53RY4 MIR216B-201ENST00000390186 82 ntBASIC0.14□□□□□ -2.39
KRTCAP3Q53RY4 SNORA25.13-201ENST00000516395 103 ntBASIC0.14□□□□□ -2.39
KRTCAP3Q53RY4 MIR4473-201ENST00000583731 91 ntBASIC0.14□□□□□ -2.39
KRTCAP3Q53RY4 MIR6718-201ENST00000616153 80 ntBASIC0.14□□□□□ -2.39
KRTCAP3Q53RY4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.13□□□□□ -2.39
KRTCAP3Q53RY4 RNA5SP214-201ENST00000363378 118 ntBASIC0.13□□□□□ -2.39
KRTCAP3Q53RY4 RNU6V-201ENST00000384105 107 ntBASIC0.13□□□□□ -2.39
KRTCAP3Q53RY4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
KRTCAP3Q53RY4 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
KRTCAP3Q53RY4 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
KRTCAP3Q53RY4 RNU6-782P-201ENST00000516852 104 ntBASIC0.13□□□□□ -2.39
KRTCAP3Q53RY4 MIR548AE1-201ENST00000583292 70 ntBASIC0.13□□□□□ -2.39
KRTCAP3Q53RY4 SNORA63.2-201ENST00000362603 126 ntBASIC0.12□□□□□ -2.39
KRTCAP3Q53RY4 SNORA42.1-201ENST00000363515 137 ntBASIC0.12□□□□□ -2.39
KRTCAP3Q53RY4 SNORD115-27-201ENST00000364430 82 ntBASIC0.12□□□□□ -2.39
KRTCAP3Q53RY4 RNU6-1051P-201ENST00000365471 102 ntBASIC0.12□□□□□ -2.39
KRTCAP3Q53RY4 MIR548H2-201ENST00000408874 88 ntBASIC0.12□□□□□ -2.39
KRTCAP3Q53RY4 RNU7-153P-201ENST00000516455 62 ntBASIC0.12□□□□□ -2.39
KRTCAP3Q53RY4 AC104408.1-201ENST00000605241 170 ntBASIC0.12□□□□□ -2.39
KRTCAP3Q53RY4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.11□□□□□ -2.39
KRTCAP3Q53RY4 SNORD114-9-201ENST00000364370 72 ntBASIC0.11□□□□□ -2.39
KRTCAP3Q53RY4 RNU6-652P-201ENST00000365488 107 ntBASIC0.11□□□□□ -2.39
KRTCAP3Q53RY4 MIR516B1-201ENST00000385211 90 ntBASIC0.11□□□□□ -2.39
KRTCAP3Q53RY4 MIR4668-201ENST00000582284 70 ntBASIC0.11□□□□□ -2.39
KRTCAP3Q53RY4 uc_338.10-201ENST00000621872 182 ntBASIC0.11□□□□□ -2.39
KRTCAP3Q53RY4 RNU6-54P-201ENST00000365563 107 ntBASIC0.1□□□□□ -2.39
KRTCAP3Q53RY4 MIR1236-201ENST00000408340 102 ntBASIC0.1□□□□□ -2.39
KRTCAP3Q53RY4 RNU6-161P-201ENST00000363051 106 ntBASIC0.09□□□□□ -2.4
KRTCAP3Q53RY4 Y_RNA.220-201ENST00000364244 109 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms