Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNA5SP220-201ENST00000516298 104 ntBASIC0.05□□□□□ -2.4
CKAP4Q07065 RNU6-1057P-201ENST00000517162 102 ntBASIC0.05□□□□□ -2.4
CKAP4Q07065 AC104996.3-201ENST00000590718 94 ntBASIC0.05□□□□□ -2.4
CKAP4Q07065 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.05□□□□□ -2.4
CKAP4Q07065 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.05□□□□□ -2.4
CKAP4Q07065 MIR655-201ENST00000362159 97 ntBASIC0.04□□□□□ -2.4
CKAP4Q07065 RNU6-811P-201ENST00000384069 107 ntBASIC0.04□□□□□ -2.4
CKAP4Q07065 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
CKAP4Q07065 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
CKAP4Q07065 MIR892B-201ENST00000401279 77 ntBASIC0.04□□□□□ -2.4
CKAP4Q07065 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
CKAP4Q07065 AC145423.2-201ENST00000610631 239 ntBASIC0.04□□□□□ -2.4
CKAP4Q07065 Y_RNA.190-201ENST00000363964 101 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 Y_RNA.290-201ENST00000364879 114 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 Y_RNA.348-201ENST00000365403 103 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 RNU6-32P-201ENST00000383948 107 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 RNU6-13P-201ENST00000384248 107 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 RNU6-12P-201ENST00000384604 107 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 RNU6-41P-201ENST00000384741 107 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
CKAP4Q07065 RNU6-162P-201ENST00000516228 103 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 RNU6-180P-201ENST00000516697 61 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 RNU5B-6P-201ENST00000516765 68 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 AC026421.1-201ENST00000519101 163 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 MIR548AE1-201ENST00000583292 70 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 MIR4473-201ENST00000583731 91 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 MIR924-201ENST00000638017 53 ntBASIC0.03□□□□□ -2.4
CKAP4Q07065 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 RNA5SP325-201ENST00000363756 130 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 Y_RNA.407-201ENST00000383986 113 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 Y_RNA.491-201ENST00000384417 107 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 MIR516B1-201ENST00000385211 90 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 SNORA49-201ENST00000386157 136 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 RNA5SP292-201ENST00000390974 118 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 SNORA75.1-201ENST00000391130 148 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 snoU13.18-201ENST00000459483 104 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 SNORA40.13-201ENST00000516379 120 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 RNU6-175P-201ENST00000516896 107 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 SCARNA11.2-201ENST00000517183 154 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 SNORA40.17-201ENST00000517256 115 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 RN7SL660P-201ENST00000614852 299 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 uc_338.10-201ENST00000621872 182 ntBASIC0.02□□□□□ -2.41
CKAP4Q07065 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.02□□□□□ -2.41
CKAP4Q07065 SNORA63.2-201ENST00000362603 126 ntBASIC0.01□□□□□ -2.41
CKAP4Q07065 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
CKAP4Q07065 RNU6V-201ENST00000384105 107 ntBASIC0.01□□□□□ -2.41
CKAP4Q07065 SNORA24B-201ENST00000384176 131 ntBASIC0.01□□□□□ -2.41
CKAP4Q07065 Y_RNA.495-201ENST00000384435 112 ntBASIC0.01□□□□□ -2.41
CKAP4Q07065 Y_RNA.609-201ENST00000410669 89 ntBASIC0.01□□□□□ -2.41
CKAP4Q07065 RNU7-165P-201ENST00000458864 60 ntBASIC0.01□□□□□ -2.41
CKAP4Q07065 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
CKAP4Q07065 AC084368.1-201ENST00000620935 65 ntBASIC0.01□□□□□ -2.41
CKAP4Q07065 SNORD114-23-201ENST00000363536 72 ntBASIC0□□□□□ -2.41
CKAP4Q07065 RNU6-640P-201ENST00000363693 105 ntBASIC0□□□□□ -2.41
CKAP4Q07065 Y_RNA.437-201ENST00000384113 113 ntBASIC0□□□□□ -2.41
CKAP4Q07065 RNU6-42P-201ENST00000384165 107 ntBASIC0□□□□□ -2.41
CKAP4Q07065 RNU6-905P-201ENST00000384434 107 ntBASIC0□□□□□ -2.41
CKAP4Q07065 MIR593-201ENST00000384856 100 ntBASIC0□□□□□ -2.41
CKAP4Q07065 SNORD90-201ENST00000391145 111 ntBASIC0□□□□□ -2.41
CKAP4Q07065 SNORA18.5-201ENST00000516616 101 ntBASIC0□□□□□ -2.41
CKAP4Q07065 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0□□□□□ -2.41
CKAP4Q07065 MIR6507-201ENST00000613630 70 ntBASIC0□□□□□ -2.41
CKAP4Q07065 MALAT1.1-201ENST00000618249 95 ntBASIC0□□□□□ -2.41
CKAP4Q07065 MIR6734-201ENST00000621166 68 ntBASIC0□□□□□ -2.41
CKAP4Q07065 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0□□□□□ -2.41
CKAP4Q07065 SNORD114-26-201ENST00000363543 72 ntBASIC-0.01□□□□□ -2.41
CKAP4Q07065 RNU6-302P-201ENST00000365249 107 ntBASIC-0.01□□□□□ -2.41
CKAP4Q07065 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.01□□□□□ -2.41
CKAP4Q07065 FGF7P7-201ENST00000514120 227 ntBASIC-0.01□□□□□ -2.41
CKAP4Q07065 RNU4-32P-201ENST00000363404 141 ntBASIC-0.02□□□□□ -2.41
CKAP4Q07065 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.02□□□□□ -2.41
CKAP4Q07065 RNU6-54P-201ENST00000365563 107 ntBASIC-0.02□□□□□ -2.41
CKAP4Q07065 MIR582-201ENST00000365731 98 ntBASIC-0.02□□□□□ -2.41
CKAP4Q07065 RNU6-154P-201ENST00000384306 106 ntBASIC-0.02□□□□□ -2.41
CKAP4Q07065 MIR106A-201ENST00000384870 81 ntBASIC-0.02□□□□□ -2.41
CKAP4Q07065 SNORD42B-201ENST00000458893 67 ntBASIC-0.02□□□□□ -2.41
CKAP4Q07065 RNU7-188P-201ENST00000517063 64 ntBASIC-0.02□□□□□ -2.41
CKAP4Q07065 CR383656.4-201ENST00000546909 122 ntBASIC-0.02□□□□□ -2.41
CKAP4Q07065 MIR3140-201ENST00000583685 90 ntBASIC-0.02□□□□□ -2.41
CKAP4Q07065 AC010487.4-201ENST00000637027 61 ntBASIC-0.02□□□□□ -2.41
CKAP4Q07065 MIR148A-201ENST00000362215 68 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 SNORD114-29-201ENST00000364819 70 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 RNY4P3-201ENST00000365254 95 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 RNU6-497P-201ENST00000365316 104 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 MIR488-201ENST00000365739 83 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 RNU6-929P-201ENST00000384429 107 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 MIR652-201ENST00000385278 98 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 MIR1236-201ENST00000408340 102 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 RNA5SP163-201ENST00000410304 99 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 AC244250.2-201ENST00000418731 148 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 AC097510.1-201ENST00000510945 133 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 RNU6-719P-201ENST00000516671 104 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 AL590491.3-201ENST00000610731 82 ntBASIC-0.03□□□□□ -2.41
CKAP4Q07065 RNU6-495P-201ENST00000362995 107 ntBASIC-0.04□□□□□ -2.42
CKAP4Q07065 RNU6-153P-201ENST00000364422 104 ntBASIC-0.04□□□□□ -2.42
CKAP4Q07065 SNORA32.1-201ENST00000364514 115 ntBASIC-0.04□□□□□ -2.42
CKAP4Q07065 RNY1P4-201ENST00000384595 115 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 283 ms