Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SNORD77.2-201ENST00000391045 68 ntBASIC0.78□□□□□ -2.28
GFRA1P56159 AL450471.1-201ENST00000447509 127 ntBASIC0.78□□□□□ -2.28
GFRA1P56159 snoU13.18-201ENST00000459483 104 ntBASIC0.78□□□□□ -2.28
GFRA1P56159 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
GFRA1P56159 SNORA25.18-201ENST00000607153 114 ntBASIC0.78□□□□□ -2.28
GFRA1P56159 Y_RNA.264-201ENST00000364665 102 ntBASIC0.77□□□□□ -2.29
GFRA1P56159 RNU6-652P-201ENST00000365488 107 ntBASIC0.77□□□□□ -2.29
GFRA1P56159 RNU6-208P-201ENST00000362431 107 ntBASIC0.76□□□□□ -2.29
GFRA1P56159 RNU6-557P-201ENST00000516842 110 ntBASIC0.76□□□□□ -2.29
GFRA1P56159 MIR4460-201ENST00000577862 86 ntBASIC0.76□□□□□ -2.29
GFRA1P56159 MIR151B-201ENST00000584249 96 ntBASIC0.76□□□□□ -2.29
GFRA1P56159 MIR6788-201ENST00000618842 66 ntBASIC0.76□□□□□ -2.29
GFRA1P56159 RNU6-161P-201ENST00000363051 106 ntBASIC0.75□□□□□ -2.29
GFRA1P56159 SNORD118-201ENST00000363593 134 ntBASIC0.75□□□□□ -2.29
GFRA1P56159 RNU1-141P-201ENST00000364623 158 ntBASIC0.75□□□□□ -2.29
GFRA1P56159 RNU6-1124P-201ENST00000384169 107 ntBASIC0.75□□□□□ -2.29
GFRA1P56159 MIR548J-201ENST00000408833 112 ntBASIC0.75□□□□□ -2.29
GFRA1P56159 RNU6-1108P-201ENST00000516308 104 ntBASIC0.75□□□□□ -2.29
GFRA1P56159 MIR518A1-201ENST00000385068 85 ntBASIC0.74□□□□□ -2.29
GFRA1P56159 SNORD78.1-201ENST00000390866 65 ntBASIC0.74□□□□□ -2.29
GFRA1P56159 RNU6-380P-201ENST00000410207 107 ntBASIC0.74□□□□□ -2.29
GFRA1P56159 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.74□□□□□ -2.29
GFRA1P56159 AC093423.1-201ENST00000440817 142 ntBASIC0.74□□□□□ -2.29
GFRA1P56159 RNA5SP484-201ENST00000458857 111 ntBASIC0.74□□□□□ -2.29
GFRA1P56159 SNORD114-2-201ENST00000363953 78 ntBASIC0.73□□□□□ -2.29
GFRA1P56159 RNU6-787P-201ENST00000384032 107 ntBASIC0.73□□□□□ -2.29
GFRA1P56159 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.73□□□□□ -2.29
GFRA1P56159 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
GFRA1P56159 RNU6-1223P-201ENST00000517124 104 ntBASIC0.73□□□□□ -2.29
GFRA1P56159 MIR548O2-201ENST00000616090 70 ntBASIC0.73□□□□□ -2.29
GFRA1P56159 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.73□□□□□ -2.29
GFRA1P56159 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
GFRA1P56159 RNU6-315P-201ENST00000362666 107 ntBASIC0.72□□□□□ -2.29
GFRA1P56159 RNU6-686P-201ENST00000364839 107 ntBASIC0.72□□□□□ -2.29
GFRA1P56159 Y_RNA.313-201ENST00000365095 103 ntBASIC0.72□□□□□ -2.29
GFRA1P56159 RNU6-945P-201ENST00000383947 107 ntBASIC0.72□□□□□ -2.29
GFRA1P56159 SNORA24B-201ENST00000384176 131 ntBASIC0.72□□□□□ -2.29
GFRA1P56159 MT-TY-201ENST00000387409 66 ntBASIC0.72□□□□□ -2.29
GFRA1P56159 RNU6-1177P-201ENST00000391058 104 ntBASIC0.72□□□□□ -2.29
GFRA1P56159 snoU13.17-201ENST00000458802 104 ntBASIC0.72□□□□□ -2.29
GFRA1P56159 AC018659.1-201ENST00000551083 169 ntBASIC0.72□□□□□ -2.29
GFRA1P56159 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
GFRA1P56159 NAMPTP3-201ENST00000569273 224 ntBASIC0.72□□□□□ -2.29
GFRA1P56159 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
GFRA1P56159 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
GFRA1P56159 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
GFRA1P56159 AC006210.1-201ENST00000424882 111 ntBASIC0.71□□□□□ -2.3
GFRA1P56159 AC069271.1-201ENST00000445577 156 ntBASIC0.71□□□□□ -2.3
GFRA1P56159 AC097510.1-201ENST00000510945 133 ntBASIC0.71□□□□□ -2.3
GFRA1P56159 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.71□□□□□ -2.3
GFRA1P56159 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
GFRA1P56159 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
GFRA1P56159 RNU6-228P-201ENST00000362700 106 ntBASIC0.7□□□□□ -2.3
GFRA1P56159 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
GFRA1P56159 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
GFRA1P56159 RNU2-59P-201ENST00000410482 191 ntBASIC0.7□□□□□ -2.3
GFRA1P56159 AC069503.3-201ENST00000618674 145 ntBASIC0.7□□□□□ -2.3
GFRA1P56159 RNU6-478P-201ENST00000363904 110 ntBASIC0.69□□□□□ -2.3
GFRA1P56159 SNORD110-201ENST00000408189 75 ntBASIC0.69□□□□□ -2.3
GFRA1P56159 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.69□□□□□ -2.3
GFRA1P56159 MIR4712-201ENST00000583750 82 ntBASIC0.69□□□□□ -2.3
GFRA1P56159 AC022709.1-201ENST00000615967 87 ntBASIC0.69□□□□□ -2.3
GFRA1P56159 RNU6V-201ENST00000384105 107 ntBASIC0.68□□□□□ -2.3
GFRA1P56159 MIR1255A-201ENST00000408338 113 ntBASIC0.68□□□□□ -2.3
GFRA1P56159 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
GFRA1P56159 MIR4752-201ENST00000579672 72 ntBASIC0.68□□□□□ -2.3
GFRA1P56159 MIR7111-201ENST00000619751 72 ntBASIC0.68□□□□□ -2.3
GFRA1P56159 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
GFRA1P56159 MIRLET7A1-201ENST00000362295 80 ntBASIC0.67□□□□□ -2.3
GFRA1P56159 Y_RNA.12-201ENST00000362393 112 ntBASIC0.67□□□□□ -2.3
GFRA1P56159 AC098934.3-201ENST00000430450 190 ntBASIC0.67□□□□□ -2.3
GFRA1P56159 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
GFRA1P56159 MIR5000-201ENST00000577717 103 ntBASIC0.67□□□□□ -2.3
GFRA1P56159 YWHAEP2-201ENST00000580066 112 ntBASIC0.67□□□□□ -2.3
GFRA1P56159 YWHAEP3-201ENST00000582767 121 ntBASIC0.67□□□□□ -2.3
GFRA1P56159 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
GFRA1P56159 RNU6-1094P-201ENST00000362416 104 ntBASIC0.66□□□□□ -2.3
GFRA1P56159 RNU6-681P-201ENST00000364012 104 ntBASIC0.66□□□□□ -2.3
GFRA1P56159 MIR489-201ENST00000384923 84 ntBASIC0.66□□□□□ -2.3
GFRA1P56159 Y_RNA.685-201ENST00000516532 108 ntBASIC0.66□□□□□ -2.3
GFRA1P56159 MIR5706-201ENST00000579841 80 ntBASIC0.66□□□□□ -2.3
GFRA1P56159 MIR6515-201ENST00000619843 57 ntBASIC0.66□□□□□ -2.3
GFRA1P56159 Y_RNA.371-201ENST00000365591 113 ntBASIC0.65□□□□□ -2.31
GFRA1P56159 SNORA2A-201ENST00000383885 135 ntBASIC0.65□□□□□ -2.31
GFRA1P56159 RNU6-863P-201ENST00000515989 104 ntBASIC0.65□□□□□ -2.31
GFRA1P56159 SNORA70.25-201ENST00000612741 95 ntBASIC0.65□□□□□ -2.31
GFRA1P56159 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
GFRA1P56159 RNU6-54P-201ENST00000365563 107 ntBASIC0.64□□□□□ -2.31
GFRA1P56159 Y_RNA.423-201ENST00000384057 113 ntBASIC0.64□□□□□ -2.31
GFRA1P56159 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
GFRA1P56159 U7.6-201ENST00000610841 64 ntBASIC0.64□□□□□ -2.31
GFRA1P56159 U6.81-201ENST00000612550 106 ntBASIC0.64□□□□□ -2.31
GFRA1P56159 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
GFRA1P56159 Y_RNA.94-201ENST00000363068 106 ntBASIC0.63□□□□□ -2.31
GFRA1P56159 RNU6-824P-201ENST00000363724 104 ntBASIC0.63□□□□□ -2.31
GFRA1P56159 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.63□□□□□ -2.31
GFRA1P56159 Y_RNA.606-201ENST00000410579 103 ntBASIC0.63□□□□□ -2.31
GFRA1P56159 RNU6-274P-201ENST00000459566 107 ntBASIC0.63□□□□□ -2.31
GFRA1P56159 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
GFRA1P56159 RNU5B-6P-201ENST00000516765 68 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms