Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.07□□□□□ -2.58
CDH6P55285 SNORD114-25-201ENST00000363742 72 ntBASIC-1.07□□□□□ -2.58
CDH6P55285 SNORD114-4-201ENST00000363962 75 ntBASIC-1.07□□□□□ -2.58
CDH6P55285 RNU4-36P-201ENST00000364294 144 ntBASIC-1.07□□□□□ -2.58
CDH6P55285 RNA5SP192-201ENST00000364404 120 ntBASIC-1.07□□□□□ -2.58
CDH6P55285 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.07□□□□□ -2.58
CDH6P55285 RNU6-24P-201ENST00000384440 107 ntBASIC-1.07□□□□□ -2.58
CDH6P55285 RNU6-476P-201ENST00000384726 107 ntBASIC-1.07□□□□□ -2.58
CDH6P55285 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
CDH6P55285 RNU6-861P-201ENST00000516745 106 ntBASIC-1.07□□□□□ -2.58
CDH6P55285 RNU6-502P-201ENST00000362419 108 ntBASIC-1.08□□□□□ -2.58
CDH6P55285 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.08□□□□□ -2.58
CDH6P55285 MIR518B-201ENST00000385127 83 ntBASIC-1.08□□□□□ -2.58
CDH6P55285 MIR513C-201ENST00000401352 84 ntBASIC-1.08□□□□□ -2.58
CDH6P55285 RNU6-75P-201ENST00000515944 104 ntBASIC-1.08□□□□□ -2.58
CDH6P55285 RNA5SP470-201ENST00000516463 106 ntBASIC-1.08□□□□□ -2.58
CDH6P55285 MIR3115-201ENST00000577915 68 ntBASIC-1.08□□□□□ -2.58
CDH6P55285 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.08□□□□□ -2.58
CDH6P55285 RNU6-816P-201ENST00000390914 107 ntBASIC-1.09□□□□□ -2.58
CDH6P55285 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.09□□□□□ -2.58
CDH6P55285 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.09□□□□□ -2.58
CDH6P55285 RNU6-721P-201ENST00000410155 105 ntBASIC-1.09□□□□□ -2.58
CDH6P55285 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.09□□□□□ -2.58
CDH6P55285 SNORD22.1-201ENST00000516331 125 ntBASIC-1.09□□□□□ -2.58
CDH6P55285 RNU6-781P-201ENST00000516377 101 ntBASIC-1.09□□□□□ -2.58
CDH6P55285 U3.27-201ENST00000391237 200 ntBASIC-1.1□□□□□ -2.59
CDH6P55285 SNORD42B-201ENST00000458893 67 ntBASIC-1.1□□□□□ -2.59
CDH6P55285 FGF7P7-201ENST00000514120 227 ntBASIC-1.1□□□□□ -2.59
CDH6P55285 MIR378F-201ENST00000578143 78 ntBASIC-1.1□□□□□ -2.59
CDH6P55285 MIR3165-201ENST00000579874 75 ntBASIC-1.1□□□□□ -2.59
CDH6P55285 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.1□□□□□ -2.59
CDH6P55285 RNY4P6-201ENST00000363667 96 ntBASIC-1.11□□□□□ -2.59
CDH6P55285 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.11□□□□□ -2.59
CDH6P55285 AL500527.2-201ENST00000454105 95 ntBASIC-1.11□□□□□ -2.59
CDH6P55285 RNU6-327P-201ENST00000516270 127 ntBASIC-1.11□□□□□ -2.59
CDH6P55285 RNU6-719P-201ENST00000516671 104 ntBASIC-1.11□□□□□ -2.59
CDH6P55285 AC025521.1-201ENST00000621624 286 ntBASIC-1.11□□□□□ -2.59
CDH6P55285 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.12□□□□□ -2.59
CDH6P55285 RNU6-65P-201ENST00000516332 98 ntBASIC-1.12□□□□□ -2.59
CDH6P55285 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.12□□□□□ -2.59
CDH6P55285 MIR6854-201ENST00000614935 69 ntBASIC-1.12□□□□□ -2.59
CDH6P55285 RNU6-682P-201ENST00000363843 106 ntBASIC-1.13□□□□□ -2.59
CDH6P55285 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.13□□□□□ -2.59
CDH6P55285 AL158147.1-201ENST00000443970 75 ntBASIC-1.13□□□□□ -2.59
CDH6P55285 RNA5SP461-201ENST00000516451 104 ntBASIC-1.13□□□□□ -2.59
CDH6P55285 SNORA81.3-201ENST00000517283 198 ntBASIC-1.13□□□□□ -2.59
CDH6P55285 MIR8068-201ENST00000618032 68 ntBASIC-1.13□□□□□ -2.59
CDH6P55285 snoR1.1-201ENST00000628177 80 ntBASIC-1.13□□□□□ -2.59
CDH6P55285 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.14□□□□□ -2.59
CDH6P55285 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.14□□□□□ -2.59
CDH6P55285 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.14□□□□□ -2.59
CDH6P55285 SNORD116-18-201ENST00000383961 92 ntBASIC-1.14□□□□□ -2.59
CDH6P55285 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.14□□□□□ -2.59
CDH6P55285 MIR1468-201ENST00000410600 86 ntBASIC-1.14□□□□□ -2.59
CDH6P55285 RNU7-120P-201ENST00000459334 63 ntBASIC-1.14□□□□□ -2.59
CDH6P55285 AC022137.1-201ENST00000483735 151 ntBASIC-1.14□□□□□ -2.59
CDH6P55285 MIR4536-1-201ENST00000583537 88 ntBASIC-1.14□□□□□ -2.59
CDH6P55285 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.14□□□□□ -2.59
CDH6P55285 AP001340.1-201ENST00000624405 217 ntBASIC-1.14□□□□□ -2.59
CDH6P55285 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.15□□□□□ -2.59
CDH6P55285 MIR517B-201ENST00000385102 67 ntBASIC-1.15□□□□□ -2.59
CDH6P55285 MIR601-201ENST00000385256 79 ntBASIC-1.15□□□□□ -2.59
CDH6P55285 AP000533.3-201ENST00000447704 118 ntBASIC-1.15□□□□□ -2.59
CDH6P55285 RNU6-274P-201ENST00000459566 107 ntBASIC-1.15□□□□□ -2.59
CDH6P55285 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.15□□□□□ -2.59
CDH6P55285 MIR4503-201ENST00000582187 83 ntBASIC-1.15□□□□□ -2.59
CDH6P55285 RNU6-196P-201ENST00000384315 107 ntBASIC-1.16□□□□□ -2.6
CDH6P55285 MIR6773-201ENST00000612812 74 ntBASIC-1.16□□□□□ -2.6
CDH6P55285 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.17□□□□□ -2.6
CDH6P55285 MIR577-201ENST00000385196 96 ntBASIC-1.17□□□□□ -2.6
CDH6P55285 MIR4499-201ENST00000584834 69 ntBASIC-1.17□□□□□ -2.6
CDH6P55285 U7.2-201ENST00000607576 63 ntBASIC-1.17□□□□□ -2.6
CDH6P55285 AC025166.1-201ENST00000612411 163 ntBASIC-1.17□□□□□ -2.6
CDH6P55285 SNORA63.6-201ENST00000364921 119 ntBASIC-1.18□□□□□ -2.6
CDH6P55285 SNORD50.2-201ENST00000365465 70 ntBASIC-1.18□□□□□ -2.6
CDH6P55285 RNU6-574P-201ENST00000384265 107 ntBASIC-1.18□□□□□ -2.6
CDH6P55285 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.18□□□□□ -2.6
CDH6P55285 MIR548X2-201ENST00000579776 100 ntBASIC-1.18□□□□□ -2.6
CDH6P55285 uc_338.19-201ENST00000616808 99 ntBASIC-1.18□□□□□ -2.6
CDH6P55285 MIR198-201ENST00000637333 62 ntBASIC-1.18□□□□□ -2.6
CDH6P55285 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.19□□□□□ -2.6
CDH6P55285 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.19□□□□□ -2.6
CDH6P55285 RNU7-85P-201ENST00000458851 63 ntBASIC-1.19□□□□□ -2.6
CDH6P55285 SNORD58C-201ENST00000365223 64 ntBASIC-1.2□□□□□ -2.6
CDH6P55285 RNU6-905P-201ENST00000384434 107 ntBASIC-1.2□□□□□ -2.6
CDH6P55285 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
CDH6P55285 RNU6-592P-201ENST00000411333 103 ntBASIC-1.2□□□□□ -2.6
CDH6P55285 MTND3P2-201ENST00000438452 342 ntBASIC-1.2□□□□□ -2.6
CDH6P55285 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.2□□□□□ -2.6
CDH6P55285 AL513043.2-201ENST00000573941 143 ntBASIC-1.2□□□□□ -2.6
CDH6P55285 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.21□□□□□ -2.6
CDH6P55285 SNORD74.6-201ENST00000364796 70 ntBASIC-1.21□□□□□ -2.6
CDH6P55285 RNU6-132P-201ENST00000383863 107 ntBASIC-1.21□□□□□ -2.6
CDH6P55285 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.21□□□□□ -2.6
CDH6P55285 MIRLET7B-201ENST00000385140 83 ntBASIC-1.21□□□□□ -2.6
CDH6P55285 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.21□□□□□ -2.6
CDH6P55285 MIR4694-201ENST00000578534 80 ntBASIC-1.21□□□□□ -2.6
CDH6P55285 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.22□□□□□ -2.6
CDH6P55285 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.22□□□□□ -2.6
CDH6P55285 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 266.9 ms