Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MIR617-201ENST00000385030 97 ntBASIC1.02□□□□□ -2.25
CCNFP41002 RNU6-380P-201ENST00000410207 107 ntBASIC1.02□□□□□ -2.25
CCNFP41002 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CCNFP41002 RNU6-726P-201ENST00000364680 107 ntBASIC1.01□□□□□ -2.25
CCNFP41002 MIR519E-201ENST00000385075 84 ntBASIC1.01□□□□□ -2.25
CCNFP41002 RNU6-279P-201ENST00000391297 101 ntBASIC1.01□□□□□ -2.25
CCNFP41002 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.01□□□□□ -2.25
CCNFP41002 RNU7-74P-201ENST00000459104 62 ntBASIC1.01□□□□□ -2.25
CCNFP41002 RNU6-638P-201ENST00000516582 104 ntBASIC1.01□□□□□ -2.25
CCNFP41002 RNA5SP94-201ENST00000516917 108 ntBASIC1.01□□□□□ -2.25
CCNFP41002 MIR6779-201ENST00000617283 64 ntBASIC1.01□□□□□ -2.25
CCNFP41002 PVT1_3.1-201ENST00000620853 95 ntBASIC1.01□□□□□ -2.25
CCNFP41002 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
CCNFP41002 Y_RNA.371-201ENST00000365591 113 ntBASIC1□□□□□ -2.25
CCNFP41002 MIR520E-201ENST00000384867 87 ntBASIC1□□□□□ -2.25
CCNFP41002 Y_RNA.660-201ENST00000516002 120 ntBASIC1□□□□□ -2.25
CCNFP41002 RNA5SP268-201ENST00000516828 124 ntBASIC1□□□□□ -2.25
CCNFP41002 RNU6-557P-201ENST00000516842 110 ntBASIC1□□□□□ -2.25
CCNFP41002 RNU6-315P-201ENST00000362666 107 ntBASIC0.99□□□□□ -2.25
CCNFP41002 SNORA36.1-201ENST00000363424 132 ntBASIC0.99□□□□□ -2.25
CCNFP41002 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
CCNFP41002 Y_RNA.244-201ENST00000364484 109 ntBASIC0.99□□□□□ -2.25
CCNFP41002 Y_RNA.264-201ENST00000364665 102 ntBASIC0.99□□□□□ -2.25
CCNFP41002 RNU6-24P-201ENST00000384440 107 ntBASIC0.99□□□□□ -2.25
CCNFP41002 SNORD41.1-201ENST00000391000 69 ntBASIC0.99□□□□□ -2.25
CCNFP41002 RPS29P1-201ENST00000465274 159 ntBASIC0.99□□□□□ -2.25
CCNFP41002 MIRLET7A1-201ENST00000362295 80 ntBASIC0.98□□□□□ -2.25
CCNFP41002 RNU6-1094P-201ENST00000362416 104 ntBASIC0.98□□□□□ -2.25
CCNFP41002 MIR548J-201ENST00000408833 112 ntBASIC0.98□□□□□ -2.25
CCNFP41002 Y_RNA.12-201ENST00000362393 112 ntBASIC0.97□□□□□ -2.25
CCNFP41002 RNU6-110P-201ENST00000384508 104 ntBASIC0.97□□□□□ -2.25
CCNFP41002 U3.27-201ENST00000391237 200 ntBASIC0.97□□□□□ -2.25
CCNFP41002 MIR4484-201ENST00000582855 83 ntBASIC0.97□□□□□ -2.25
CCNFP41002 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.97□□□□□ -2.25
CCNFP41002 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CCNFP41002 RNU6-269P-201ENST00000391077 97 ntBASIC0.96□□□□□ -2.26
CCNFP41002 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.96□□□□□ -2.26
CCNFP41002 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
CCNFP41002 MIR140-201ENST00000385282 100 ntBASIC0.95□□□□□ -2.26
CCNFP41002 PSMC1P5-201ENST00000512850 177 ntBASIC0.95□□□□□ -2.26
CCNFP41002 RNA5SP395-201ENST00000516567 118 ntBASIC0.95□□□□□ -2.26
CCNFP41002 MIR216B-201ENST00000390186 82 ntBASIC0.94□□□□□ -2.26
CCNFP41002 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CCNFP41002 RNU6-1177P-201ENST00000391058 104 ntBASIC0.94□□□□□ -2.26
CCNFP41002 MIR4460-201ENST00000577862 86 ntBASIC0.94□□□□□ -2.26
CCNFP41002 AC092634.7-201ENST00000621022 103 ntBASIC0.94□□□□□ -2.26
CCNFP41002 MIR6828-201ENST00000636181 60 ntBASIC0.94□□□□□ -2.26
CCNFP41002 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.93□□□□□ -2.26
CCNFP41002 AC097510.1-201ENST00000510945 133 ntBASIC0.93□□□□□ -2.26
CCNFP41002 YWHAEP2-201ENST00000580066 112 ntBASIC0.93□□□□□ -2.26
CCNFP41002 YWHAEP3-201ENST00000582767 121 ntBASIC0.93□□□□□ -2.26
CCNFP41002 MIR7107-201ENST00000611489 80 ntBASIC0.93□□□□□ -2.26
CCNFP41002 MIR4773-1-201ENST00000637203 78 ntBASIC0.93□□□□□ -2.26
CCNFP41002 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
CCNFP41002 RNA5SP517-201ENST00000364724 117 ntBASIC0.92□□□□□ -2.26
CCNFP41002 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
CCNFP41002 MIR889-201ENST00000401280 79 ntBASIC0.92□□□□□ -2.26
CCNFP41002 RNA5SP325-201ENST00000363756 130 ntBASIC0.91□□□□□ -2.26
CCNFP41002 SNORA24B-201ENST00000384176 131 ntBASIC0.91□□□□□ -2.26
CCNFP41002 SNORA8.2-201ENST00000384372 139 ntBASIC0.91□□□□□ -2.26
CCNFP41002 RNA5SP484-201ENST00000458857 111 ntBASIC0.91□□□□□ -2.26
CCNFP41002 RNU6-807P-201ENST00000516805 107 ntBASIC0.91□□□□□ -2.26
CCNFP41002 SNORA25.18-201ENST00000607153 114 ntBASIC0.91□□□□□ -2.26
CCNFP41002 MIR6857-201ENST00000613267 93 ntBASIC0.91□□□□□ -2.26
CCNFP41002 MIR6767-201ENST00000637302 66 ntBASIC0.91□□□□□ -2.26
CCNFP41002 RNU6-824P-201ENST00000363724 104 ntBASIC0.9□□□□□ -2.27
CCNFP41002 RNU1-141P-201ENST00000364623 158 ntBASIC0.9□□□□□ -2.27
CCNFP41002 RNU6V-201ENST00000384105 107 ntBASIC0.9□□□□□ -2.27
CCNFP41002 NAMPTP3-201ENST00000569273 224 ntBASIC0.9□□□□□ -2.27
CCNFP41002 MIR5000-201ENST00000577717 103 ntBASIC0.9□□□□□ -2.27
CCNFP41002 RNU6-340P-201ENST00000364005 107 ntBASIC0.89□□□□□ -2.27
CCNFP41002 RNU6-681P-201ENST00000364012 104 ntBASIC0.89□□□□□ -2.27
CCNFP41002 RNU6-303P-201ENST00000517091 106 ntBASIC0.89□□□□□ -2.27
CCNFP41002 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
CCNFP41002 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.89□□□□□ -2.27
CCNFP41002 AL162376.1-201ENST00000624117 175 ntBASIC0.89□□□□□ -2.27
CCNFP41002 RNU6-54P-201ENST00000365563 107 ntBASIC0.88□□□□□ -2.27
CCNFP41002 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
CCNFP41002 RNU2-59P-201ENST00000410482 191 ntBASIC0.88□□□□□ -2.27
CCNFP41002 RNU5B-6P-201ENST00000516765 68 ntBASIC0.88□□□□□ -2.27
CCNFP41002 MIR4752-201ENST00000579672 72 ntBASIC0.88□□□□□ -2.27
CCNFP41002 RN7SL793P-201ENST00000583259 296 ntBASIC0.88□□□□□ -2.27
CCNFP41002 MIR548O2-201ENST00000616090 70 ntBASIC0.88□□□□□ -2.27
CCNFP41002 RNU6-382P-201ENST00000365181 106 ntBASIC0.87□□□□□ -2.27
CCNFP41002 U7.4-201ENST00000614961 63 ntBASIC0.87□□□□□ -2.27
CCNFP41002 MIR4662A-201ENST00000637499 67 ntBASIC0.87□□□□□ -2.27
CCNFP41002 Y_RNA.258-201ENST00000364613 105 ntBASIC0.86□□□□□ -2.27
CCNFP41002 Y_RNA.532-201ENST00000384590 113 ntBASIC0.86□□□□□ -2.27
CCNFP41002 SNORD71-201ENST00000411292 86 ntBASIC0.86□□□□□ -2.27
CCNFP41002 AC006210.1-201ENST00000424882 111 ntBASIC0.86□□□□□ -2.27
CCNFP41002 AC093423.1-201ENST00000440817 142 ntBASIC0.86□□□□□ -2.27
CCNFP41002 AC069271.1-201ENST00000445577 156 ntBASIC0.86□□□□□ -2.27
CCNFP41002 SCARNA18B-201ENST00000458806 135 ntBASIC0.86□□□□□ -2.27
CCNFP41002 RNU6-274P-201ENST00000459566 107 ntBASIC0.86□□□□□ -2.27
CCNFP41002 MIR1297-201ENST00000637311 77 ntBASIC0.86□□□□□ -2.27
CCNFP41002 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
CCNFP41002 Y_RNA.205-201ENST00000364128 113 ntBASIC0.85□□□□□ -2.27
CCNFP41002 MT-TY-201ENST00000387409 66 ntBASIC0.85□□□□□ -2.27
CCNFP41002 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.85□□□□□ -2.27
CCNFP41002 AC145423.2-201ENST00000610631 239 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms