Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNORA18.5-201ENST00000516616 101 ntBASIC0.68□□□□□ -2.3
ERCC3P19447 AC243829.3-201ENST00000622177 108 ntBASIC0.68□□□□□ -2.3
ERCC3P19447 MIR924-201ENST00000638017 53 ntBASIC0.68□□□□□ -2.3
ERCC3P19447 RNA5SP457-201ENST00000363657 124 ntBASIC0.67□□□□□ -2.3
ERCC3P19447 RNU6-294P-201ENST00000364999 102 ntBASIC0.67□□□□□ -2.3
ERCC3P19447 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.67□□□□□ -2.3
ERCC3P19447 MIR4460-201ENST00000577862 86 ntBASIC0.67□□□□□ -2.3
ERCC3P19447 SNORA2A-201ENST00000383885 135 ntBASIC0.66□□□□□ -2.3
ERCC3P19447 MIR519C-201ENST00000385053 87 ntBASIC0.66□□□□□ -2.3
ERCC3P19447 SNORD110-201ENST00000408189 75 ntBASIC0.66□□□□□ -2.3
ERCC3P19447 MIR103A1-201ENST00000362165 78 ntBASIC0.65□□□□□ -2.31
ERCC3P19447 SNORD44.1-201ENST00000363202 61 ntBASIC0.65□□□□□ -2.31
ERCC3P19447 SNORD115-37-201ENST00000363768 82 ntBASIC0.65□□□□□ -2.31
ERCC3P19447 IGLL4P-201ENST00000614590 133 ntBASIC0.65□□□□□ -2.31
ERCC3P19447 Y_RNA.17-201ENST00000362433 111 ntBASIC0.64□□□□□ -2.31
ERCC3P19447 RNU1-141P-201ENST00000364623 158 ntBASIC0.64□□□□□ -2.31
ERCC3P19447 RNU6-267P-201ENST00000516714 103 ntBASIC0.64□□□□□ -2.31
ERCC3P19447 SNORA70.25-201ENST00000612741 95 ntBASIC0.64□□□□□ -2.31
ERCC3P19447 MIRLET7D-201ENST00000362263 87 ntBASIC0.63□□□□□ -2.31
ERCC3P19447 SNORD115-27-201ENST00000364430 82 ntBASIC0.63□□□□□ -2.31
ERCC3P19447 Y_RNA.620-201ENST00000411009 88 ntBASIC0.63□□□□□ -2.31
ERCC3P19447 uc_338.17-201ENST00000619633 179 ntBASIC0.63□□□□□ -2.31
ERCC3P19447 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
ERCC3P19447 RNU6-1298P-201ENST00000362456 101 ntBASIC0.62□□□□□ -2.31
ERCC3P19447 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
ERCC3P19447 MIR760-201ENST00000390220 80 ntBASIC0.62□□□□□ -2.31
ERCC3P19447 RNU7-153P-201ENST00000516455 62 ntBASIC0.62□□□□□ -2.31
ERCC3P19447 MIR4796-201ENST00000580742 81 ntBASIC0.62□□□□□ -2.31
ERCC3P19447 RNY1P1-201ENST00000364372 112 ntBASIC0.61□□□□□ -2.31
ERCC3P19447 RNY4P3-201ENST00000365254 95 ntBASIC0.61□□□□□ -2.31
ERCC3P19447 Y_RNA.369-201ENST00000365568 117 ntBASIC0.61□□□□□ -2.31
ERCC3P19447 MIR216B-201ENST00000390186 82 ntBASIC0.61□□□□□ -2.31
ERCC3P19447 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.31
ERCC3P19447 RNU6-633P-201ENST00000362612 103 ntBASIC0.6□□□□□ -2.31
ERCC3P19447 Y_RNA.374-201ENST00000365606 101 ntBASIC0.6□□□□□ -2.31
ERCC3P19447 Y_RNA.611-201ENST00000410682 108 ntBASIC0.6□□□□□ -2.31
ERCC3P19447 AC073261.1-201ENST00000429409 121 ntBASIC0.6□□□□□ -2.31
ERCC3P19447 AL157398.1-201ENST00000452981 186 ntBASIC0.6□□□□□ -2.31
ERCC3P19447 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
ERCC3P19447 Y_RNA.258-201ENST00000364613 105 ntBASIC0.59□□□□□ -2.31
ERCC3P19447 RNU6-863P-201ENST00000515989 104 ntBASIC0.59□□□□□ -2.31
ERCC3P19447 RNA5SP330-201ENST00000517096 96 ntBASIC0.59□□□□□ -2.31
ERCC3P19447 MIR5706-201ENST00000579841 80 ntBASIC0.59□□□□□ -2.31
ERCC3P19447 YWHAEP2-201ENST00000580066 112 ntBASIC0.59□□□□□ -2.31
ERCC3P19447 MIR3140-201ENST00000583685 90 ntBASIC0.59□□□□□ -2.31
ERCC3P19447 MIR6755-201ENST00000619993 66 ntBASIC0.59□□□□□ -2.31
ERCC3P19447 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.58□□□□□ -2.32
ERCC3P19447 RNA5SP62-201ENST00000363457 110 ntBASIC0.58□□□□□ -2.32
ERCC3P19447 RNU6-1051P-201ENST00000365471 102 ntBASIC0.58□□□□□ -2.32
ERCC3P19447 RNU5B-6P-201ENST00000516765 68 ntBASIC0.58□□□□□ -2.32
ERCC3P19447 MIR4473-201ENST00000583731 91 ntBASIC0.58□□□□□ -2.32
ERCC3P19447 AC006254.2-201ENST00000603259 279 ntBASIC0.58□□□□□ -2.32
ERCC3P19447 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.58□□□□□ -2.32
ERCC3P19447 Y_RNA.115-201ENST00000363272 98 ntBASIC0.57□□□□□ -2.32
ERCC3P19447 RNU6-219P-201ENST00000364728 107 ntBASIC0.57□□□□□ -2.32
ERCC3P19447 MIR8087-201ENST00000612745 78 ntBASIC0.57□□□□□ -2.32
ERCC3P19447 MIR330-201ENST00000362196 94 ntBASIC0.56□□□□□ -2.32
ERCC3P19447 Y_RNA.30-201ENST00000362572 97 ntBASIC0.56□□□□□ -2.32
ERCC3P19447 RNU6-1255P-201ENST00000363434 112 ntBASIC0.56□□□□□ -2.32
ERCC3P19447 Y_RNA.558-201ENST00000384685 113 ntBASIC0.56□□□□□ -2.32
ERCC3P19447 U3.27-201ENST00000391237 200 ntBASIC0.56□□□□□ -2.32
ERCC3P19447 Y_RNA.593-201ENST00000410292 98 ntBASIC0.56□□□□□ -2.32
ERCC3P19447 U7.6-201ENST00000610841 64 ntBASIC0.56□□□□□ -2.32
ERCC3P19447 SNORA63.2-201ENST00000362603 126 ntBASIC0.55□□□□□ -2.32
ERCC3P19447 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
ERCC3P19447 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.55□□□□□ -2.32
ERCC3P19447 MIR494-201ENST00000349529 81 ntBASIC0.54□□□□□ -2.32
ERCC3P19447 RNU5F-1-201ENST00000362507 117 ntBASIC0.54□□□□□ -2.32
ERCC3P19447 RNU6V-201ENST00000384105 107 ntBASIC0.54□□□□□ -2.32
ERCC3P19447 RNU6-1232P-201ENST00000516299 86 ntBASIC0.54□□□□□ -2.32
ERCC3P19447 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.54□□□□□ -2.32
ERCC3P19447 AC243829.6-201ENST00000612652 106 ntBASIC0.54□□□□□ -2.32
ERCC3P19447 AC069503.3-201ENST00000618674 145 ntBASIC0.54□□□□□ -2.32
ERCC3P19447 MIR548BB-201ENST00000626714 66 ntBASIC0.54□□□□□ -2.32
ERCC3P19447 SNORA9.1-201ENST00000362412 131 ntBASIC0.53□□□□□ -2.32
ERCC3P19447 AC093423.1-201ENST00000440817 142 ntBASIC0.53□□□□□ -2.32
ERCC3P19447 AL109933.3-201ENST00000619095 188 ntBASIC0.53□□□□□ -2.32
ERCC3P19447 MIR499B-201ENST00000636498 73 ntBASIC0.53□□□□□ -2.32
ERCC3P19447 MT-TY-201ENST00000387409 66 ntBASIC0.52□□□□□ -2.33
ERCC3P19447 SNORD90-201ENST00000391145 111 ntBASIC0.52□□□□□ -2.33
ERCC3P19447 AC093729.1-201ENST00000513074 128 ntBASIC0.52□□□□□ -2.33
ERCC3P19447 RNU1-29P-201ENST00000606574 126 ntBASIC0.52□□□□□ -2.33
ERCC3P19447 Y_RNA.43-201ENST00000362670 111 ntBASIC0.51□□□□□ -2.33
ERCC3P19447 Y_RNA.73-201ENST00000362910 113 ntBASIC0.51□□□□□ -2.33
ERCC3P19447 RNA5SP128-201ENST00000365305 116 ntBASIC0.51□□□□□ -2.33
ERCC3P19447 VTRNA1-3-201ENST00000365645 89 ntBASIC0.51□□□□□ -2.33
ERCC3P19447 RNU6-815P-201ENST00000384080 113 ntBASIC0.51□□□□□ -2.33
ERCC3P19447 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
ERCC3P19447 AC090625.1-201ENST00000357130 210 ntBASIC0.5□□□□□ -2.33
ERCC3P19447 MIR450A2-201ENST00000385022 100 ntBASIC0.49□□□□□ -2.33
ERCC3P19447 SNORA25.13-201ENST00000516395 103 ntBASIC0.49□□□□□ -2.33
ERCC3P19447 RNU6-762P-201ENST00000517107 102 ntBASIC0.49□□□□□ -2.33
ERCC3P19447 MIR548O2-201ENST00000616090 70 ntBASIC0.49□□□□□ -2.33
ERCC3P19447 RNU6-675P-201ENST00000384236 104 ntBASIC0.48□□□□□ -2.33
ERCC3P19447 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
ERCC3P19447 MIR1197-201ENST00000408818 88 ntBASIC0.48□□□□□ -2.33
ERCC3P19447 RNU6-848P-201ENST00000515948 107 ntBASIC0.48□□□□□ -2.33
ERCC3P19447 RNU6-617P-201ENST00000516147 107 ntBASIC0.48□□□□□ -2.33
ERCC3P19447 RNU6-473P-201ENST00000516164 107 ntBASIC0.48□□□□□ -2.33
ERCC3P19447 RNU6-1049P-201ENST00000516414 107 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 222.7 ms