Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 MIR19B1-201ENST00000384829 87 ntBASIC0.88□□□□□ -2.27
SNHG28P0DPA3 MIR519E-201ENST00000385075 84 ntBASIC0.88□□□□□ -2.27
SNHG28P0DPA3 RNU7-104P-201ENST00000459398 79 ntBASIC0.88□□□□□ -2.27
SNHG28P0DPA3 AC114801.3-201ENST00000510231 177 ntBASIC0.88□□□□□ -2.27
SNHG28P0DPA3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.88□□□□□ -2.27
SNHG28P0DPA3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
SNHG28P0DPA3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.88□□□□□ -2.27
SNHG28P0DPA3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SNHG28P0DPA3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SNHG28P0DPA3 Y_RNA.386-201ENST00000383913 105 ntBASIC0.87□□□□□ -2.27
SNHG28P0DPA3 RNU6-1241P-201ENST00000384536 107 ntBASIC0.87□□□□□ -2.27
SNHG28P0DPA3 SNORD105-201ENST00000386910 85 ntBASIC0.87□□□□□ -2.27
SNHG28P0DPA3 AC097510.1-201ENST00000510945 133 ntBASIC0.87□□□□□ -2.27
SNHG28P0DPA3 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
SNHG28P0DPA3 AC244669.1-204ENST00000621564 178 ntBASIC0.87□□□□□ -2.27
SNHG28P0DPA3 RNU5F-1-201ENST00000362507 117 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 SNORD18A-201ENST00000363753 72 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 SNORD28-201ENST00000384706 75 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 RNU6-1177P-201ENST00000391058 104 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 RNU6-587P-201ENST00000391282 106 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 AC093423.1-201ENST00000440817 142 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 SNORD42B-201ENST00000458893 67 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 RNU7-13P-201ENST00000516413 62 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 SNORA40.17-201ENST00000517256 115 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 NAMPTP3-201ENST00000569273 224 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 MIR1297-201ENST00000637311 77 ntBASIC0.86□□□□□ -2.27
SNHG28P0DPA3 RNU6-54P-201ENST00000365563 107 ntBASIC0.85□□□□□ -2.27
SNHG28P0DPA3 RNU2-59P-201ENST00000410482 191 ntBASIC0.85□□□□□ -2.27
SNHG28P0DPA3 RNU6-634P-201ENST00000459134 106 ntBASIC0.85□□□□□ -2.27
SNHG28P0DPA3 RNA5SP220-201ENST00000516298 104 ntBASIC0.85□□□□□ -2.27
SNHG28P0DPA3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.85□□□□□ -2.27
SNHG28P0DPA3 RNA5SP404-201ENST00000517118 132 ntBASIC0.85□□□□□ -2.27
SNHG28P0DPA3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.84□□□□□ -2.27
SNHG28P0DPA3 SNORD115-22-201ENST00000364456 82 ntBASIC0.84□□□□□ -2.27
SNHG28P0DPA3 SNORA8.1-201ENST00000384250 140 ntBASIC0.84□□□□□ -2.27
SNHG28P0DPA3 RNU6-788P-201ENST00000390967 104 ntBASIC0.84□□□□□ -2.27
SNHG28P0DPA3 U7.7-201ENST00000459276 60 ntBASIC0.84□□□□□ -2.27
SNHG28P0DPA3 RNU6-807P-201ENST00000516805 107 ntBASIC0.84□□□□□ -2.27
SNHG28P0DPA3 RNA5SP47-201ENST00000517230 109 ntBASIC0.84□□□□□ -2.27
SNHG28P0DPA3 MIR3678-201ENST00000578455 94 ntBASIC0.84□□□□□ -2.27
SNHG28P0DPA3 AL078603.1-201ENST00000603824 313 ntBASIC0.84□□□□□ -2.27
SNHG28P0DPA3 MIR4773-1-201ENST00000637203 78 ntBASIC0.84□□□□□ -2.27
SNHG28P0DPA3 SNORA36.1-201ENST00000363424 132 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 RNU6-726P-201ENST00000364680 107 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 SNORD45A-201ENST00000384512 84 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 MIR573-201ENST00000384964 99 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 MIR617-201ENST00000385030 97 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 SNORD41.1-201ENST00000391000 69 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 AC067940.1-201ENST00000458411 300 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.83□□□□□ -2.28
SNHG28P0DPA3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 MIR3612-201ENST00000579753 87 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 MIR4714-201ENST00000580728 77 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 MIR548O2-201ENST00000616090 70 ntBASIC0.83□□□□□ -2.28
SNHG28P0DPA3 RNU6-495P-201ENST00000362995 107 ntBASIC0.82□□□□□ -2.28
SNHG28P0DPA3 RNY4P3-201ENST00000365254 95 ntBASIC0.82□□□□□ -2.28
SNHG28P0DPA3 RNA5SP117-201ENST00000365294 118 ntBASIC0.82□□□□□ -2.28
SNHG28P0DPA3 SNORD115-44-201ENST00000365391 82 ntBASIC0.82□□□□□ -2.28
SNHG28P0DPA3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SNHG28P0DPA3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SNHG28P0DPA3 AC244098.3-201ENST00000424803 96 ntBASIC0.82□□□□□ -2.28
SNHG28P0DPA3 RNA5SP255-201ENST00000516370 107 ntBASIC0.82□□□□□ -2.28
SNHG28P0DPA3 MIR3675-201ENST00000583661 73 ntBASIC0.82□□□□□ -2.28
SNHG28P0DPA3 MIR6835-201ENST00000621552 64 ntBASIC0.82□□□□□ -2.28
SNHG28P0DPA3 AC067863.3-201ENST00000624172 122 ntBASIC0.82□□□□□ -2.28
SNHG28P0DPA3 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
SNHG28P0DPA3 RNU1-124P-201ENST00000363861 145 ntBASIC0.81□□□□□ -2.28
SNHG28P0DPA3 RNU6-716P-201ENST00000365621 103 ntBASIC0.81□□□□□ -2.28
SNHG28P0DPA3 RNY1P8-201ENST00000383970 114 ntBASIC0.81□□□□□ -2.28
SNHG28P0DPA3 SNORD116-24-201ENST00000384549 92 ntBASIC0.81□□□□□ -2.28
SNHG28P0DPA3 MIR203A-201ENST00000384836 110 ntBASIC0.81□□□□□ -2.28
SNHG28P0DPA3 RNU6-269P-201ENST00000391077 97 ntBASIC0.81□□□□□ -2.28
SNHG28P0DPA3 U3.27-201ENST00000391237 200 ntBASIC0.81□□□□□ -2.28
SNHG28P0DPA3 MIR1265-201ENST00000408444 86 ntBASIC0.81□□□□□ -2.28
SNHG28P0DPA3 RNU6-380P-201ENST00000410207 107 ntBASIC0.81□□□□□ -2.28
SNHG28P0DPA3 RNU6-539P-201ENST00000516665 103 ntBASIC0.81□□□□□ -2.28
SNHG28P0DPA3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.81□□□□□ -2.28
SNHG28P0DPA3 RNU6-42P-201ENST00000384165 107 ntBASIC0.8□□□□□ -2.28
SNHG28P0DPA3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.8□□□□□ -2.28
SNHG28P0DPA3 snoU13.18-201ENST00000459483 104 ntBASIC0.8□□□□□ -2.28
SNHG28P0DPA3 AC018659.1-201ENST00000551083 169 ntBASIC0.8□□□□□ -2.28
SNHG28P0DPA3 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
SNHG28P0DPA3 MIR4639-201ENST00000584938 69 ntBASIC0.8□□□□□ -2.28
SNHG28P0DPA3 AL109933.3-201ENST00000619095 188 ntBASIC0.8□□□□□ -2.28
SNHG28P0DPA3 SNORD45.1-201ENST00000363181 77 ntBASIC0.79□□□□□ -2.28
SNHG28P0DPA3 RNU6V-201ENST00000384105 107 ntBASIC0.79□□□□□ -2.28
SNHG28P0DPA3 MIR489-201ENST00000384923 84 ntBASIC0.79□□□□□ -2.28
SNHG28P0DPA3 SNORD99-201ENST00000408612 74 ntBASIC0.79□□□□□ -2.28
SNHG28P0DPA3 RNU6-982P-201ENST00000516216 102 ntBASIC0.79□□□□□ -2.28
SNHG28P0DPA3 MIR18A-201ENST00000362310 71 ntBASIC0.78□□□□□ -2.28
SNHG28P0DPA3 RNU6-990P-201ENST00000364385 104 ntBASIC0.78□□□□□ -2.28
SNHG28P0DPA3 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
SNHG28P0DPA3 RNU6-604P-201ENST00000390917 100 ntBASIC0.78□□□□□ -2.28
SNHG28P0DPA3 SNORD75.2-201ENST00000408784 58 ntBASIC0.78□□□□□ -2.28
SNHG28P0DPA3 FABP5P4-201ENST00000437203 171 ntBASIC0.78□□□□□ -2.28
SNHG28P0DPA3 AC011195.1-201ENST00000578177 177 ntBASIC0.78□□□□□ -2.28
SNHG28P0DPA3 MIR6828-201ENST00000636181 60 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms