Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AC069271.1-201ENST00000445577 156 ntBASIC0.29□□□□□ -2.36
KRT6AP02538 SNORA18.5-201ENST00000516616 101 ntBASIC0.29□□□□□ -2.36
KRT6AP02538 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.29□□□□□ -2.36
KRT6AP02538 SNORD115-37-201ENST00000363768 82 ntBASIC0.28□□□□□ -2.36
KRT6AP02538 Y_RNA.540-201ENST00000384638 111 ntBASIC0.28□□□□□ -2.36
KRT6AP02538 MIR451A-201ENST00000385059 72 ntBASIC0.28□□□□□ -2.36
KRT6AP02538 AC093423.1-201ENST00000440817 142 ntBASIC0.28□□□□□ -2.36
KRT6AP02538 RNU6-848P-201ENST00000515948 107 ntBASIC0.28□□□□□ -2.36
KRT6AP02538 RNU6-617P-201ENST00000516147 107 ntBASIC0.28□□□□□ -2.36
KRT6AP02538 RNU6-473P-201ENST00000516164 107 ntBASIC0.28□□□□□ -2.36
KRT6AP02538 RNU6-1049P-201ENST00000516414 107 ntBASIC0.28□□□□□ -2.36
KRT6AP02538 MIRLET7D-201ENST00000362263 87 ntBASIC0.27□□□□□ -2.37
KRT6AP02538 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
KRT6AP02538 SNORD115-27-201ENST00000364430 82 ntBASIC0.27□□□□□ -2.37
KRT6AP02538 RNU1-141P-201ENST00000364623 158 ntBASIC0.27□□□□□ -2.37
KRT6AP02538 Y_RNA.593-201ENST00000410292 98 ntBASIC0.27□□□□□ -2.37
KRT6AP02538 RNU6-267P-201ENST00000516714 103 ntBASIC0.27□□□□□ -2.37
KRT6AP02538 MIR5706-201ENST00000579841 80 ntBASIC0.27□□□□□ -2.37
KRT6AP02538 MIR4796-201ENST00000580742 81 ntBASIC0.27□□□□□ -2.37
KRT6AP02538 AC006254.2-201ENST00000603259 279 ntBASIC0.27□□□□□ -2.37
KRT6AP02538 SNORA63.2-201ENST00000362603 126 ntBASIC0.26□□□□□ -2.37
KRT6AP02538 RNY1P1-201ENST00000364372 112 ntBASIC0.26□□□□□ -2.37
KRT6AP02538 RNY4P3-201ENST00000365254 95 ntBASIC0.26□□□□□ -2.37
KRT6AP02538 RNU6-497P-201ENST00000365316 104 ntBASIC0.26□□□□□ -2.37
KRT6AP02538 SNORA2A-201ENST00000383885 135 ntBASIC0.26□□□□□ -2.37
KRT6AP02538 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
KRT6AP02538 RNA5SP484-201ENST00000458857 111 ntBASIC0.26□□□□□ -2.37
KRT6AP02538 NAMPTP3-201ENST00000569273 224 ntBASIC0.26□□□□□ -2.37
KRT6AP02538 MIR4460-201ENST00000577862 86 ntBASIC0.26□□□□□ -2.37
KRT6AP02538 MIR4752-201ENST00000579672 72 ntBASIC0.26□□□□□ -2.37
KRT6AP02538 IGLL4P-201ENST00000614590 133 ntBASIC0.26□□□□□ -2.37
KRT6AP02538 RNU6-1051P-201ENST00000365471 102 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 Y_RNA.423-201ENST00000384057 113 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 MIR450A2-201ENST00000385022 100 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 MIR216A-201ENST00000385063 110 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 MT-TY-201ENST00000387409 66 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 SNORD110-201ENST00000408189 75 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 AC006210.1-201ENST00000424882 111 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 AC093729.1-201ENST00000513074 128 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 FGF7P7-201ENST00000514120 227 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 RNU7-153P-201ENST00000516455 62 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 RNU1-29P-201ENST00000606574 126 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 AC069503.3-201ENST00000618674 145 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 MIR548BB-201ENST00000626714 66 ntBASIC0.25□□□□□ -2.37
KRT6AP02538 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
KRT6AP02538 Y_RNA.611-201ENST00000410682 108 ntBASIC0.24□□□□□ -2.37
KRT6AP02538 RNU6-1052P-201ENST00000411398 104 ntBASIC0.24□□□□□ -2.37
KRT6AP02538 RNU6-719P-201ENST00000516671 104 ntBASIC0.24□□□□□ -2.37
KRT6AP02538 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.24□□□□□ -2.37
KRT6AP02538 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
KRT6AP02538 U7.6-201ENST00000610841 64 ntBASIC0.24□□□□□ -2.37
KRT6AP02538 SNORA70.25-201ENST00000612741 95 ntBASIC0.24□□□□□ -2.37
KRT6AP02538 MIR548O2-201ENST00000616090 70 ntBASIC0.24□□□□□ -2.37
KRT6AP02538 MIR6755-201ENST00000619993 66 ntBASIC0.24□□□□□ -2.37
KRT6AP02538 RNU5F-1-201ENST00000362507 117 ntBASIC0.23□□□□□ -2.37
KRT6AP02538 RNU6-820P-201ENST00000384273 107 ntBASIC0.23□□□□□ -2.37
KRT6AP02538 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.23□□□□□ -2.37
KRT6AP02538 SNORA25.13-201ENST00000516395 103 ntBASIC0.23□□□□□ -2.37
KRT6AP02538 RN7SL793P-201ENST00000583259 296 ntBASIC0.23□□□□□ -2.37
KRT6AP02538 MIR3140-201ENST00000583685 90 ntBASIC0.23□□□□□ -2.37
KRT6AP02538 MIR760-201ENST00000390220 80 ntBASIC0.22□□□□□ -2.37
KRT6AP02538 SNORD90-201ENST00000391145 111 ntBASIC0.22□□□□□ -2.37
KRT6AP02538 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.22□□□□□ -2.37
KRT6AP02538 AC140658.3-201ENST00000567603 271 ntBASIC0.22□□□□□ -2.37
KRT6AP02538 YWHAEP2-201ENST00000580066 112 ntBASIC0.22□□□□□ -2.37
KRT6AP02538 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.22□□□□□ -2.37
KRT6AP02538 AC006160.2-201ENST00000637708 154 ntBASIC0.22□□□□□ -2.37
KRT6AP02538 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.22□□□□□ -2.37
KRT6AP02538 MIR494-201ENST00000349529 81 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 Y_RNA.73-201ENST00000362910 113 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 RNA5SP62-201ENST00000363457 110 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 SNORD114-23-201ENST00000363536 72 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 SNORD73B-201ENST00000364394 72 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 RNU6-1327P-201ENST00000365302 105 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 RNA5SP128-201ENST00000365305 116 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 RNU6-979P-201ENST00000383896 107 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 Y_RNA.426-201ENST00000384068 113 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 RNU6-815P-201ENST00000384080 113 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 RNU6V-201ENST00000384105 107 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 SNORA24B-201ENST00000384176 131 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 RNU6-762P-201ENST00000517107 102 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 MIR5588-201ENST00000581890 63 ntBASIC0.21□□□□□ -2.38
KRT6AP02538 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
KRT6AP02538 SNORA9.1-201ENST00000362412 131 ntBASIC0.2□□□□□ -2.38
KRT6AP02538 Y_RNA.125-201ENST00000363371 111 ntBASIC0.2□□□□□ -2.38
KRT6AP02538 RNU6-624P-201ENST00000363411 107 ntBASIC0.2□□□□□ -2.38
KRT6AP02538 RNU6-242P-201ENST00000384359 107 ntBASIC0.2□□□□□ -2.38
KRT6AP02538 RNU6-1177P-201ENST00000391058 104 ntBASIC0.2□□□□□ -2.38
KRT6AP02538 Y_RNA.607-201ENST00000410597 98 ntBASIC0.2□□□□□ -2.38
KRT6AP02538 HMGN2P22-201ENST00000427588 175 ntBASIC0.2□□□□□ -2.38
KRT6AP02538 AC073261.1-201ENST00000429409 121 ntBASIC0.2□□□□□ -2.38
KRT6AP02538 AC022137.1-201ENST00000483735 151 ntBASIC0.2□□□□□ -2.38
KRT6AP02538 RNU5B-6P-201ENST00000516765 68 ntBASIC0.2□□□□□ -2.38
KRT6AP02538 Y_RNA.437-201ENST00000384113 113 ntBASIC0.19□□□□□ -2.38
KRT6AP02538 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
KRT6AP02538 SNORD77.2-201ENST00000391045 68 ntBASIC0.19□□□□□ -2.38
KRT6AP02538 MIR1302-4-201ENST00000408701 150 ntBASIC0.19□□□□□ -2.38
KRT6AP02538 AL450471.1-201ENST00000447509 127 ntBASIC0.19□□□□□ -2.38
KRT6AP02538 RNU7-171P-201ENST00000459581 62 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms