Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.18□□□□□ -2.6
NPHP4O75161 RNU6-915P-201ENST00000364943 103 ntBASIC-1.18□□□□□ -2.6
NPHP4O75161 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.18□□□□□ -2.6
NPHP4O75161 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.18□□□□□ -2.6
NPHP4O75161 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.18□□□□□ -2.6
NPHP4O75161 AL442128.1-201ENST00000615151 90 ntBASIC-1.18□□□□□ -2.6
NPHP4O75161 snoR1.1-201ENST00000628177 80 ntBASIC-1.18□□□□□ -2.6
NPHP4O75161 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.19□□□□□ -2.6
NPHP4O75161 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.19□□□□□ -2.6
NPHP4O75161 MIR606-201ENST00000384851 96 ntBASIC-1.19□□□□□ -2.6
NPHP4O75161 AL117351.2-201ENST00000513571 157 ntBASIC-1.19□□□□□ -2.6
NPHP4O75161 FGF7P7-201ENST00000514120 227 ntBASIC-1.19□□□□□ -2.6
NPHP4O75161 AC130289.1-201ENST00000577321 73 ntBASIC-1.19□□□□□ -2.6
NPHP4O75161 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.19□□□□□ -2.6
NPHP4O75161 RNU6-24P-201ENST00000384440 107 ntBASIC-1.2□□□□□ -2.6
NPHP4O75161 RNU7-197P-201ENST00000458836 62 ntBASIC-1.2□□□□□ -2.6
NPHP4O75161 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.2□□□□□ -2.6
NPHP4O75161 RNY4P27-201ENST00000363341 96 ntBASIC-1.21□□□□□ -2.6
NPHP4O75161 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.21□□□□□ -2.6
NPHP4O75161 SNORA20.1-201ENST00000364790 130 ntBASIC-1.21□□□□□ -2.6
NPHP4O75161 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.21□□□□□ -2.6
NPHP4O75161 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.21□□□□□ -2.6
NPHP4O75161 MIR6773-201ENST00000612812 74 ntBASIC-1.21□□□□□ -2.6
NPHP4O75161 AC025521.1-201ENST00000621624 286 ntBASIC-1.21□□□□□ -2.6
NPHP4O75161 RNU6-797P-201ENST00000363101 109 ntBASIC-1.22□□□□□ -2.6
NPHP4O75161 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.22□□□□□ -2.6
NPHP4O75161 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.22□□□□□ -2.6
NPHP4O75161 MIR568-201ENST00000385036 95 ntBASIC-1.22□□□□□ -2.6
NPHP4O75161 U3.27-201ENST00000391237 200 ntBASIC-1.22□□□□□ -2.6
NPHP4O75161 RNA5SP136-201ENST00000410906 107 ntBASIC-1.22□□□□□ -2.6
NPHP4O75161 RNA5SP180-201ENST00000516181 101 ntBASIC-1.22□□□□□ -2.6
NPHP4O75161 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.23□□□□□ -2.61
NPHP4O75161 RNU6-337P-201ENST00000391243 106 ntBASIC-1.23□□□□□ -2.61
NPHP4O75161 AL500527.2-201ENST00000454105 95 ntBASIC-1.23□□□□□ -2.61
NPHP4O75161 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.23□□□□□ -2.61
NPHP4O75161 RNU6-592P-201ENST00000411333 103 ntBASIC-1.23□□□□□ -2.61
NPHP4O75161 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.23□□□□□ -2.61
NPHP4O75161 RNU6-65P-201ENST00000516332 98 ntBASIC-1.23□□□□□ -2.61
NPHP4O75161 RNU6-781P-201ENST00000516377 101 ntBASIC-1.23□□□□□ -2.61
NPHP4O75161 MIR3115-201ENST00000577915 68 ntBASIC-1.23□□□□□ -2.61
NPHP4O75161 MIR4536-1-201ENST00000583537 88 ntBASIC-1.23□□□□□ -2.61
NPHP4O75161 AC062037.2-201ENST00000610137 73 ntBASIC-1.23□□□□□ -2.61
NPHP4O75161 RNU6-151P-201ENST00000364158 107 ntBASIC-1.24□□□□□ -2.61
NPHP4O75161 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.24□□□□□ -2.61
NPHP4O75161 RNU6-816P-201ENST00000390914 107 ntBASIC-1.24□□□□□ -2.61
NPHP4O75161 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.24□□□□□ -2.61
NPHP4O75161 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.24□□□□□ -2.61
NPHP4O75161 SNORD18.2-201ENST00000459604 70 ntBASIC-1.24□□□□□ -2.61
NPHP4O75161 RNU6-647P-201ENST00000364243 107 ntBASIC-1.25□□□□□ -2.61
NPHP4O75161 SNORD74.6-201ENST00000364796 70 ntBASIC-1.25□□□□□ -2.61
NPHP4O75161 RNU6-158P-201ENST00000517104 100 ntBASIC-1.25□□□□□ -2.61
NPHP4O75161 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.25□□□□□ -2.61
NPHP4O75161 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.26□□□□□ -2.61
NPHP4O75161 MIRLET7B-201ENST00000385140 83 ntBASIC-1.26□□□□□ -2.61
NPHP4O75161 MTCYBP9-201ENST00000431021 303 ntBASIC-1.26□□□□□ -2.61
NPHP4O75161 MIR3140-201ENST00000583685 90 ntBASIC-1.26□□□□□ -2.61
NPHP4O75161 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.27□□□□□ -2.61
NPHP4O75161 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.27□□□□□ -2.61
NPHP4O75161 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.27□□□□□ -2.61
NPHP4O75161 RNU6-274P-201ENST00000459566 107 ntBASIC-1.27□□□□□ -2.61
NPHP4O75161 AC072026.1-201ENST00000605023 201 ntBASIC-1.27□□□□□ -2.61
NPHP4O75161 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.27□□□□□ -2.61
NPHP4O75161 RNU6-990P-201ENST00000364385 104 ntBASIC-1.28□□□□□ -2.61
NPHP4O75161 SNORA63.6-201ENST00000364921 119 ntBASIC-1.28□□□□□ -2.61
NPHP4O75161 RNU6-132P-201ENST00000383863 107 ntBASIC-1.28□□□□□ -2.61
NPHP4O75161 MIR124-2-201ENST00000385081 109 ntBASIC-1.28□□□□□ -2.61
NPHP4O75161 SNORD64-201ENST00000386683 67 ntBASIC-1.28□□□□□ -2.61
NPHP4O75161 RNU7-85P-201ENST00000458851 63 ntBASIC-1.28□□□□□ -2.61
NPHP4O75161 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.28□□□□□ -2.61
NPHP4O75161 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.28□□□□□ -2.61
NPHP4O75161 MIR4499-201ENST00000584834 69 ntBASIC-1.28□□□□□ -2.61
NPHP4O75161 uc_338.19-201ENST00000616808 99 ntBASIC-1.28□□□□□ -2.61
NPHP4O75161 SNORD115-23-201ENST00000364461 82 ntBASIC-1.29□□□□□ -2.62
NPHP4O75161 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.29□□□□□ -2.62
NPHP4O75161 SNORD50.2-201ENST00000365465 70 ntBASIC-1.29□□□□□ -2.62
NPHP4O75161 RNU6-738P-201ENST00000384531 106 ntBASIC-1.29□□□□□ -2.62
NPHP4O75161 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.29□□□□□ -2.62
NPHP4O75161 RNU6-861P-201ENST00000516745 106 ntBASIC-1.29□□□□□ -2.62
NPHP4O75161 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.3□□□□□ -2.62
NPHP4O75161 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.3□□□□□ -2.62
NPHP4O75161 RNU6-431P-201ENST00000383874 107 ntBASIC-1.3□□□□□ -2.62
NPHP4O75161 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.3□□□□□ -2.62
NPHP4O75161 RNA5SP470-201ENST00000516463 106 ntBASIC-1.3□□□□□ -2.62
NPHP4O75161 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.31□□□□□ -2.62
NPHP4O75161 MIR577-201ENST00000385196 96 ntBASIC-1.31□□□□□ -2.62
NPHP4O75161 AL513043.2-201ENST00000573941 143 ntBASIC-1.31□□□□□ -2.62
NPHP4O75161 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.31□□□□□ -2.62
NPHP4O75161 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.31□□□□□ -2.62
NPHP4O75161 RNU6-495P-201ENST00000362995 107 ntBASIC-1.32□□□□□ -2.62
NPHP4O75161 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.32□□□□□ -2.62
NPHP4O75161 MIR513C-201ENST00000401352 84 ntBASIC-1.32□□□□□ -2.62
NPHP4O75161 MIR1302-3-201ENST00000408128 138 ntBASIC-1.32□□□□□ -2.62
NPHP4O75161 AL158147.1-201ENST00000443970 75 ntBASIC-1.32□□□□□ -2.62
NPHP4O75161 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.32□□□□□ -2.62
NPHP4O75161 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.32□□□□□ -2.62
NPHP4O75161 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.32□□□□□ -2.62
NPHP4O75161 SNORA63.2-201ENST00000362603 126 ntBASIC-1.33□□□□□ -2.62
NPHP4O75161 SNORD114-17-201ENST00000364699 75 ntBASIC-1.33□□□□□ -2.62
NPHP4O75161 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.33□□□□□ -2.62
NPHP4O75161 SNORA81.3-201ENST00000517283 198 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 228.2 ms