Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RNU6-824P-201ENST00000363724 104 ntBASIC1.14□□□□□ -2.23
SRGAP3O43295 RNU6-681P-201ENST00000364012 104 ntBASIC1.14□□□□□ -2.23
SRGAP3O43295 SNORD114-24-201ENST00000365029 72 ntBASIC1.14□□□□□ -2.23
SRGAP3O43295 RNU6-42P-201ENST00000384165 107 ntBASIC1.14□□□□□ -2.23
SRGAP3O43295 SNORA8.1-201ENST00000384250 140 ntBASIC1.14□□□□□ -2.23
SRGAP3O43295 MIR532-201ENST00000385025 91 ntBASIC1.14□□□□□ -2.23
SRGAP3O43295 RNU6-1177P-201ENST00000391058 104 ntBASIC1.14□□□□□ -2.23
SRGAP3O43295 U3.27-201ENST00000391237 200 ntBASIC1.14□□□□□ -2.23
SRGAP3O43295 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
SRGAP3O43295 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.14□□□□□ -2.23
SRGAP3O43295 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
SRGAP3O43295 MIR373-201ENST00000362273 69 ntBASIC1.13□□□□□ -2.23
SRGAP3O43295 RNU6-154P-201ENST00000384306 106 ntBASIC1.13□□□□□ -2.23
SRGAP3O43295 SNORD28-201ENST00000384706 75 ntBASIC1.13□□□□□ -2.23
SRGAP3O43295 RNU2-59P-201ENST00000410482 191 ntBASIC1.13□□□□□ -2.23
SRGAP3O43295 RPS29P1-201ENST00000465274 159 ntBASIC1.13□□□□□ -2.23
SRGAP3O43295 AC025627.3-201ENST00000582078 182 ntBASIC1.13□□□□□ -2.23
SRGAP3O43295 MIR4773-1-201ENST00000637203 78 ntBASIC1.13□□□□□ -2.23
SRGAP3O43295 Y_RNA.36-201ENST00000362602 112 ntBASIC1.12□□□□□ -2.23
SRGAP3O43295 RNU6-330P-201ENST00000363015 107 ntBASIC1.12□□□□□ -2.23
SRGAP3O43295 SNORD18A-201ENST00000363753 72 ntBASIC1.12□□□□□ -2.23
SRGAP3O43295 MIR617-201ENST00000385030 97 ntBASIC1.12□□□□□ -2.23
SRGAP3O43295 RNA5SP220-201ENST00000516298 104 ntBASIC1.12□□□□□ -2.23
SRGAP3O43295 AC011195.1-201ENST00000578177 177 ntBASIC1.12□□□□□ -2.23
SRGAP3O43295 MIR3678-201ENST00000578455 94 ntBASIC1.12□□□□□ -2.23
SRGAP3O43295 U6.81-201ENST00000612550 106 ntBASIC1.12□□□□□ -2.23
SRGAP3O43295 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SRGAP3O43295 RNU6-716P-201ENST00000365621 103 ntBASIC1.11□□□□□ -2.23
SRGAP3O43295 SNORD99-201ENST00000408612 74 ntBASIC1.11□□□□□ -2.23
SRGAP3O43295 RNA5SP255-201ENST00000516370 107 ntBASIC1.11□□□□□ -2.23
SRGAP3O43295 RNU6-1015P-201ENST00000517121 99 ntBASIC1.11□□□□□ -2.23
SRGAP3O43295 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
SRGAP3O43295 MIR519E-201ENST00000385075 84 ntBASIC1.1□□□□□ -2.23
SRGAP3O43295 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SRGAP3O43295 Y_RNA.606-201ENST00000410579 103 ntBASIC1.1□□□□□ -2.23
SRGAP3O43295 RNU6-274P-201ENST00000459566 107 ntBASIC1.1□□□□□ -2.23
SRGAP3O43295 RNU6-523P-201ENST00000516304 54 ntBASIC1.1□□□□□ -2.23
SRGAP3O43295 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
SRGAP3O43295 Y_RNA.258-201ENST00000364613 105 ntBASIC1.09□□□□□ -2.23
SRGAP3O43295 RNU6-382P-201ENST00000365181 106 ntBASIC1.09□□□□□ -2.23
SRGAP3O43295 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
SRGAP3O43295 MIR216B-201ENST00000390186 82 ntBASIC1.09□□□□□ -2.23
SRGAP3O43295 MIR6857-201ENST00000613267 93 ntBASIC1.09□□□□□ -2.23
SRGAP3O43295 RNU6-587P-201ENST00000391282 106 ntBASIC1.08□□□□□ -2.24
SRGAP3O43295 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.08□□□□□ -2.24
SRGAP3O43295 RNU7-74P-201ENST00000459104 62 ntBASIC1.08□□□□□ -2.24
SRGAP3O43295 RNU6-871P-201ENST00000516122 100 ntBASIC1.08□□□□□ -2.24
SRGAP3O43295 RNA5SP47-201ENST00000517230 109 ntBASIC1.08□□□□□ -2.24
SRGAP3O43295 MIR154-201ENST00000385243 84 ntBASIC1.07□□□□□ -2.24
SRGAP3O43295 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
SRGAP3O43295 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SRGAP3O43295 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SRGAP3O43295 RNU6-1241P-201ENST00000384536 107 ntBASIC1.06□□□□□ -2.24
SRGAP3O43295 SNORD41.1-201ENST00000391000 69 ntBASIC1.06□□□□□ -2.24
SRGAP3O43295 RNU6-687P-201ENST00000516443 89 ntBASIC1.06□□□□□ -2.24
SRGAP3O43295 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.06□□□□□ -2.24
SRGAP3O43295 MIR3675-201ENST00000583661 73 ntBASIC1.06□□□□□ -2.24
SRGAP3O43295 MIR18A-201ENST00000362310 71 ntBASIC1.05□□□□□ -2.24
SRGAP3O43295 RNU6-726P-201ENST00000364680 107 ntBASIC1.05□□□□□ -2.24
SRGAP3O43295 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
SRGAP3O43295 RNU6-54P-201ENST00000365563 107 ntBASIC1.05□□□□□ -2.24
SRGAP3O43295 AC244098.3-201ENST00000424803 96 ntBASIC1.05□□□□□ -2.24
SRGAP3O43295 AC139453.2-201ENST00000487255 133 ntBASIC1.05□□□□□ -2.24
SRGAP3O43295 SCARNA16.5-201ENST00000517114 183 ntBASIC1.05□□□□□ -2.24
SRGAP3O43295 AC211469.2-201ENST00000605461 205 ntBASIC1.05□□□□□ -2.24
SRGAP3O43295 RNA5SP222-201ENST00000411039 105 ntBASIC1.04□□□□□ -2.24
SRGAP3O43295 AC114801.3-201ENST00000510231 177 ntBASIC1.04□□□□□ -2.24
SRGAP3O43295 AC022709.1-201ENST00000615967 87 ntBASIC1.04□□□□□ -2.24
SRGAP3O43295 MIR548O2-201ENST00000616090 70 ntBASIC1.04□□□□□ -2.24
SRGAP3O43295 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.04□□□□□ -2.24
SRGAP3O43295 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
SRGAP3O43295 RNU6V-201ENST00000384105 107 ntBASIC1.03□□□□□ -2.24
SRGAP3O43295 SNORD75.2-201ENST00000408784 58 ntBASIC1.03□□□□□ -2.24
SRGAP3O43295 MIR548J-201ENST00000408833 112 ntBASIC1.03□□□□□ -2.24
SRGAP3O43295 AL691482.2-201ENST00000457453 84 ntBASIC1.03□□□□□ -2.24
SRGAP3O43295 RNA5SP227-201ENST00000516184 113 ntBASIC1.03□□□□□ -2.24
SRGAP3O43295 NAMPTP3-201ENST00000569273 224 ntBASIC1.03□□□□□ -2.24
SRGAP3O43295 MIR4460-201ENST00000577862 86 ntBASIC1.03□□□□□ -2.24
SRGAP3O43295 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.03□□□□□ -2.24
SRGAP3O43295 MIR6515-201ENST00000619843 57 ntBASIC1.03□□□□□ -2.24
SRGAP3O43295 RNU6-634P-201ENST00000459134 106 ntBASIC1.02□□□□□ -2.25
SRGAP3O43295 SNORD114-2-201ENST00000363953 78 ntBASIC1.01□□□□□ -2.25
SRGAP3O43295 RNU6-269P-201ENST00000391077 97 ntBASIC1.01□□□□□ -2.25
SRGAP3O43295 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.01□□□□□ -2.25
SRGAP3O43295 RNA5SP436-201ENST00000516020 115 ntBASIC1.01□□□□□ -2.25
SRGAP3O43295 SNORD45.1-201ENST00000363181 77 ntBASIC1□□□□□ -2.25
SRGAP3O43295 RNU6-351P-201ENST00000516097 100 ntBASIC1□□□□□ -2.25
SRGAP3O43295 RNU6-752P-201ENST00000516376 102 ntBASIC1□□□□□ -2.25
SRGAP3O43295 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1□□□□□ -2.25
SRGAP3O43295 MIR6788-201ENST00000618842 66 ntBASIC1□□□□□ -2.25
SRGAP3O43295 RNU6-495P-201ENST00000362995 107 ntBASIC0.99□□□□□ -2.25
SRGAP3O43295 RNU4-45P-201ENST00000365469 141 ntBASIC0.99□□□□□ -2.25
SRGAP3O43295 RNU6-604P-201ENST00000390917 100 ntBASIC0.99□□□□□ -2.25
SRGAP3O43295 MIR151B-201ENST00000584249 96 ntBASIC0.99□□□□□ -2.25
SRGAP3O43295 RNU1-141P-201ENST00000364623 158 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 SNORD115-31-201ENST00000365318 82 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 SNORA36.2-201ENST00000384004 127 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 MIR203A-201ENST00000384836 110 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 MT-TY-201ENST00000387409 66 ntBASIC0.98□□□□□ -2.25
SRGAP3O43295 SNORD30.1-201ENST00000391309 70 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 240.5 ms