Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU7-161P-201ENST00000517289 62 ntBASIC1.48□□□□□ -2.17
SOX1O00570 MIR1273G-201ENST00000577677 100 ntBASIC1.48□□□□□ -2.17
SOX1O00570 U6.81-201ENST00000612550 106 ntBASIC1.48□□□□□ -2.17
SOX1O00570 MIR216B-201ENST00000390186 82 ntBASIC1.47□□□□□ -2.17
SOX1O00570 RNU6-1177P-201ENST00000391058 104 ntBASIC1.47□□□□□ -2.17
SOX1O00570 MIR2113-201ENST00000459007 91 ntBASIC1.47□□□□□ -2.17
SOX1O00570 U7.7-201ENST00000459276 60 ntBASIC1.47□□□□□ -2.17
SOX1O00570 RNU6-539P-201ENST00000516665 103 ntBASIC1.47□□□□□ -2.17
SOX1O00570 RNU6-135P-201ENST00000516769 101 ntBASIC1.47□□□□□ -2.17
SOX1O00570 MIR3920-201ENST00000581751 86 ntBASIC1.47□□□□□ -2.17
SOX1O00570 MIR3675-201ENST00000583661 73 ntBASIC1.47□□□□□ -2.17
SOX1O00570 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
SOX1O00570 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SOX1O00570 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.17
SOX1O00570 RNU6-330P-201ENST00000363015 107 ntBASIC1.46□□□□□ -2.18
SOX1O00570 RNU6-824P-201ENST00000363724 104 ntBASIC1.46□□□□□ -2.18
SOX1O00570 SNORD89-201ENST00000390981 114 ntBASIC1.46□□□□□ -2.18
SOX1O00570 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SOX1O00570 RNU6-1126P-201ENST00000384002 107 ntBASIC1.45□□□□□ -2.18
SOX1O00570 RNU6-1241P-201ENST00000384536 107 ntBASIC1.45□□□□□ -2.18
SOX1O00570 AC067863.3-201ENST00000624172 122 ntBASIC1.45□□□□□ -2.18
SOX1O00570 MIR19B1-201ENST00000384829 87 ntBASIC1.44□□□□□ -2.18
SOX1O00570 MIR154-201ENST00000385243 84 ntBASIC1.44□□□□□ -2.18
SOX1O00570 SNORD105-201ENST00000386910 85 ntBASIC1.44□□□□□ -2.18
SOX1O00570 SNORA40.6-201ENST00000391153 128 ntBASIC1.44□□□□□ -2.18
SOX1O00570 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SOX1O00570 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.44□□□□□ -2.18
SOX1O00570 MIR617-201ENST00000385030 97 ntBASIC1.43□□□□□ -2.18
SOX1O00570 RNU7-104P-201ENST00000459398 79 ntBASIC1.43□□□□□ -2.18
SOX1O00570 MIR548AG2-201ENST00000581228 64 ntBASIC1.43□□□□□ -2.18
SOX1O00570 RNA5SP62-201ENST00000363457 110 ntBASIC1.42□□□□□ -2.18
SOX1O00570 RNU6-997P-201ENST00000384725 107 ntBASIC1.42□□□□□ -2.18
SOX1O00570 MIR200A-201ENST00000384875 90 ntBASIC1.42□□□□□ -2.18
SOX1O00570 MIR644A-201ENST00000385262 94 ntBASIC1.42□□□□□ -2.18
SOX1O00570 RNU6-469P-201ENST00000516253 101 ntBASIC1.42□□□□□ -2.18
SOX1O00570 RNA5SP257-201ENST00000363023 116 ntBASIC1.41□□□□□ -2.18
SOX1O00570 RNA5SP121-201ENST00000516537 101 ntBASIC1.41□□□□□ -2.18
SOX1O00570 RNA5SP330-201ENST00000517096 96 ntBASIC1.41□□□□□ -2.18
SOX1O00570 MIR4639-201ENST00000584938 69 ntBASIC1.41□□□□□ -2.18
SOX1O00570 AL590095.2-201ENST00000604136 117 ntBASIC1.41□□□□□ -2.18
SOX1O00570 RNU6-649P-201ENST00000384463 107 ntBASIC1.4□□□□□ -2.19
SOX1O00570 RNU7-74P-201ENST00000459104 62 ntBASIC1.4□□□□□ -2.19
SOX1O00570 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.4□□□□□ -2.19
SOX1O00570 AL109933.3-201ENST00000619095 188 ntBASIC1.4□□□□□ -2.19
SOX1O00570 MIR4773-1-201ENST00000637203 78 ntBASIC1.4□□□□□ -2.19
SOX1O00570 MIR373-201ENST00000362273 69 ntBASIC1.39□□□□□ -2.19
SOX1O00570 RNU6-382P-201ENST00000365181 106 ntBASIC1.39□□□□□ -2.19
SOX1O00570 SNORD28-201ENST00000384706 75 ntBASIC1.39□□□□□ -2.19
SOX1O00570 RNU6-274P-201ENST00000459566 107 ntBASIC1.39□□□□□ -2.19
SOX1O00570 RNU6-752P-201ENST00000516376 102 ntBASIC1.39□□□□□ -2.19
SOX1O00570 Y_RNA.258-201ENST00000364613 105 ntBASIC1.38□□□□□ -2.19
SOX1O00570 SNORD26-201ENST00000384147 75 ntBASIC1.38□□□□□ -2.19
SOX1O00570 RNU6-540P-201ENST00000384622 101 ntBASIC1.38□□□□□ -2.19
SOX1O00570 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.38□□□□□ -2.19
SOX1O00570 AC025627.3-201ENST00000582078 182 ntBASIC1.38□□□□□ -2.19
SOX1O00570 AC244669.1-204ENST00000621564 178 ntBASIC1.38□□□□□ -2.19
SOX1O00570 MIR519E-201ENST00000385075 84 ntBASIC1.37□□□□□ -2.19
SOX1O00570 SNORD30.1-201ENST00000391309 70 ntBASIC1.37□□□□□ -2.19
SOX1O00570 RNU7-24P-201ENST00000458867 62 ntBASIC1.37□□□□□ -2.19
SOX1O00570 MIR8053-201ENST00000613344 75 ntBASIC1.37□□□□□ -2.19
SOX1O00570 SNORD45.1-201ENST00000363181 77 ntBASIC1.36□□□□□ -2.19
SOX1O00570 SNORD41.1-201ENST00000391000 69 ntBASIC1.36□□□□□ -2.19
SOX1O00570 MIR548O2-201ENST00000616090 70 ntBASIC1.36□□□□□ -2.19
SOX1O00570 SNORD115-31-201ENST00000365318 82 ntBASIC1.35□□□□□ -2.19
SOX1O00570 SNORD75.2-201ENST00000408784 58 ntBASIC1.35□□□□□ -2.19
SOX1O00570 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
SOX1O00570 SNORD124-201ENST00000459577 104 ntBASIC1.35□□□□□ -2.19
SOX1O00570 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SOX1O00570 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
SOX1O00570 RNU6-495P-201ENST00000362995 107 ntBASIC1.34□□□□□ -2.19
SOX1O00570 MIR573-201ENST00000384964 99 ntBASIC1.34□□□□□ -2.19
SOX1O00570 AC244098.3-201ENST00000424803 96 ntBASIC1.34□□□□□ -2.19
SOX1O00570 SNORD18A-201ENST00000363753 72 ntBASIC1.33□□□□□ -2.2
SOX1O00570 RNU6-35P-201ENST00000384530 107 ntBASIC1.33□□□□□ -2.2
SOX1O00570 MIR548L-201ENST00000408303 86 ntBASIC1.33□□□□□ -2.2
SOX1O00570 AL691482.2-201ENST00000457453 84 ntBASIC1.33□□□□□ -2.2
SOX1O00570 RNA5SP47-201ENST00000517230 109 ntBASIC1.33□□□□□ -2.2
SOX1O00570 MIR3678-201ENST00000578455 94 ntBASIC1.33□□□□□ -2.2
SOX1O00570 RNU1-124P-201ENST00000363861 145 ntBASIC1.32□□□□□ -2.2
SOX1O00570 SNORD114-24-201ENST00000365029 72 ntBASIC1.32□□□□□ -2.2
SOX1O00570 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
SOX1O00570 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SOX1O00570 RNU6-663P-201ENST00000391105 106 ntBASIC1.32□□□□□ -2.2
SOX1O00570 RPS29P23-201ENST00000458635 123 ntBASIC1.32□□□□□ -2.2
SOX1O00570 CYP3A137P-201ENST00000562436 69 ntBASIC1.32□□□□□ -2.2
SOX1O00570 MIR3612-201ENST00000579753 87 ntBASIC1.32□□□□□ -2.2
SOX1O00570 AC211469.2-201ENST00000605461 205 ntBASIC1.32□□□□□ -2.2
SOX1O00570 RNU6-726P-201ENST00000364680 107 ntBASIC1.31□□□□□ -2.2
SOX1O00570 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
SOX1O00570 RNU6-895P-201ENST00000384125 103 ntBASIC1.31□□□□□ -2.2
SOX1O00570 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SOX1O00570 AC125388.1-201ENST00000459631 156 ntBASIC1.31□□□□□ -2.2
SOX1O00570 AC087343.1-201ENST00000477341 475 ntBASIC1.31□□□□□ -2.2
SOX1O00570 RNA5SP404-201ENST00000517118 132 ntBASIC1.31□□□□□ -2.2
SOX1O00570 MIR4295-201ENST00000585286 85 ntBASIC1.31□□□□□ -2.2
SOX1O00570 U6.111-201ENST00000636093 83 ntBASIC1.31□□□□□ -2.2
SOX1O00570 SNORD115-22-201ENST00000364456 82 ntBASIC1.3□□□□□ -2.2
SOX1O00570 MIR924-201ENST00000638017 53 ntBASIC1.3□□□□□ -2.2
SOX1O00570 AC093423.1-201ENST00000440817 142 ntBASIC1.29□□□□□ -2.2
SOX1O00570 RNU6-1335P-201ENST00000365426 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms