Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC120024.2-201ENST00000576526 175 ntBASIC-3.01□□□□□ -2.89
HMGN4O00479 MIR6739-201ENST00000622461 75 ntBASIC-3.01□□□□□ -2.89
HMGN4O00479 AC021753.1-201ENST00000635724 168 ntBASIC-3.01□□□□□ -2.89
HMGN4O00479 U6.106-201ENST00000636360 105 ntBASIC-3.01□□□□□ -2.89
HMGN4O00479 RNY4P14-201ENST00000363656 96 ntBASIC-3.02□□□□□ -2.89
HMGN4O00479 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.02□□□□□ -2.89
HMGN4O00479 Y_RNA.352-201ENST00000365439 102 ntBASIC-3.02□□□□□ -2.89
HMGN4O00479 MIR759-201ENST00000390224 91 ntBASIC-3.02□□□□□ -2.89
HMGN4O00479 RNU6-258P-201ENST00000390884 101 ntBASIC-3.02□□□□□ -2.89
HMGN4O00479 RNU6-630P-201ENST00000391258 106 ntBASIC-3.02□□□□□ -2.89
HMGN4O00479 AC080013.6-201ENST00000606185 215 ntBASIC-3.02□□□□□ -2.89
HMGN4O00479 AL442128.1-201ENST00000615151 90 ntBASIC-3.02□□□□□ -2.89
HMGN4O00479 Y_RNA.80-201ENST00000362996 102 ntBASIC-3.03□□□□□ -2.89
HMGN4O00479 RNU1-115P-201ENST00000365329 160 ntBASIC-3.03□□□□□ -2.89
HMGN4O00479 Y_RNA.496-201ENST00000384444 101 ntBASIC-3.03□□□□□ -2.89
HMGN4O00479 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.03□□□□□ -2.89
HMGN4O00479 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-3.03□□□□□ -2.89
HMGN4O00479 AL691482.2-201ENST00000457453 84 ntBASIC-3.03□□□□□ -2.89
HMGN4O00479 MTND4P17-201ENST00000470444 350 ntBASIC-3.03□□□□□ -2.89
HMGN4O00479 RNU6-62P-201ENST00000516526 102 ntBASIC-3.03□□□□□ -2.89
HMGN4O00479 AC093424.1-201ENST00000604999 338 ntBASIC-3.03□□□□□ -2.89
HMGN4O00479 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.03□□□□□ -2.89
HMGN4O00479 AC090582.1-201ENST00000636321 199 ntBASIC-3.03□□□□□ -2.89
HMGN4O00479 Y_RNA.154-201ENST00000363624 102 ntBASIC-3.04□□□□□ -2.9
HMGN4O00479 RNU6-818P-201ENST00000364837 108 ntBASIC-3.04□□□□□ -2.9
HMGN4O00479 Y_RNA.485-201ENST00000384395 102 ntBASIC-3.04□□□□□ -2.9
HMGN4O00479 RNU6-824P-201ENST00000363724 104 ntBASIC-3.05□□□□□ -2.9
HMGN4O00479 RNU6-1271P-201ENST00000517049 105 ntBASIC-3.05□□□□□ -2.9
HMGN4O00479 MIR4748-201ENST00000578076 82 ntBASIC-3.05□□□□□ -2.9
HMGN4O00479 AC090574.1-201ENST00000623186 233 ntBASIC-3.05□□□□□ -2.9
HMGN4O00479 MTND1P29-201ENST00000448112 647 ntBASIC-3.06□□□□□ -2.9
HMGN4O00479 RNU6-563P-201ENST00000364872 108 ntBASIC-3.07□□□□□ -2.9
HMGN4O00479 Y_RNA.573-201ENST00000384763 105 ntBASIC-3.07□□□□□ -2.9
HMGN4O00479 RNU6-696P-201ENST00000390834 107 ntBASIC-3.07□□□□□ -2.9
HMGN4O00479 MTATP6P29-201ENST00000415057 132 ntBASIC-3.07□□□□□ -2.9
HMGN4O00479 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-3.07□□□□□ -2.9
HMGN4O00479 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.07□□□□□ -2.9
HMGN4O00479 Y_RNA.82-201ENST00000363000 102 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 Y_RNA.92-201ENST00000363043 102 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 RNU6-508P-201ENST00000363231 103 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 Y_RNA.235-201ENST00000364412 102 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 Y_RNA.306-201ENST00000365015 102 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 Y_RNA.312-201ENST00000365089 102 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 Y_RNA.322-201ENST00000365151 102 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 RNU6-409P-201ENST00000384114 104 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 MIR520D-201ENST00000385002 87 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 RNU6-121P-201ENST00000410525 99 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 MTND3P2-201ENST00000438452 342 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 Y_RNA.650-201ENST00000459002 102 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 RNU6-314P-201ENST00000516574 104 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 Y_RNA.777-201ENST00000516982 102 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 MIR3611-201ENST00000584484 83 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 Y_RNA.771-201ENST00000598668 102 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 Y_RNA.789-201ENST00000622480 102 ntBASIC-3.08□□□□□ -2.9
HMGN4O00479 Y_RNA.9-201ENST00000362354 101 ntBASIC-3.1□□□□□ -2.91
HMGN4O00479 SNORA63.7-201ENST00000365579 123 ntBASIC-3.1□□□□□ -2.91
HMGN4O00479 SNORD116-1-201ENST00000384335 95 ntBASIC-3.1□□□□□ -2.91
HMGN4O00479 MT-TW-201ENST00000387382 68 ntBASIC-3.1□□□□□ -2.91
HMGN4O00479 RNU6-1009P-201ENST00000390996 107 ntBASIC-3.1□□□□□ -2.91
HMGN4O00479 SNORD90-201ENST00000391145 111 ntBASIC-3.1□□□□□ -2.91
HMGN4O00479 RNU7-30P-201ENST00000516835 62 ntBASIC-3.1□□□□□ -2.91
HMGN4O00479 AL513043.2-201ENST00000573941 143 ntBASIC-3.1□□□□□ -2.91
HMGN4O00479 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.11□□□□□ -2.91
HMGN4O00479 Y_RNA.155-201ENST00000363632 101 ntBASIC-3.11□□□□□ -2.91
HMGN4O00479 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.11□□□□□ -2.91
HMGN4O00479 SNORD18B-201ENST00000365659 72 ntBASIC-3.11□□□□□ -2.91
HMGN4O00479 Y_RNA.661-201ENST00000516003 99 ntBASIC-3.11□□□□□ -2.91
HMGN4O00479 RNU6-807P-201ENST00000516805 107 ntBASIC-3.11□□□□□ -2.91
HMGN4O00479 Y_RNA.16-201ENST00000362421 102 ntBASIC-3.12□□□□□ -2.91
HMGN4O00479 Y_RNA.163-201ENST00000363702 113 ntBASIC-3.12□□□□□ -2.91
HMGN4O00479 RNU6-309P-201ENST00000364573 106 ntBASIC-3.12□□□□□ -2.91
HMGN4O00479 SNORD116-2-201ENST00000384274 95 ntBASIC-3.12□□□□□ -2.91
HMGN4O00479 RNU6-651P-201ENST00000411040 105 ntBASIC-3.12□□□□□ -2.91
HMGN4O00479 Y_RNA.797-201ENST00000515977 94 ntBASIC-3.12□□□□□ -2.91
HMGN4O00479 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.13□□□□□ -2.91
HMGN4O00479 RNU6-151P-201ENST00000364158 107 ntBASIC-3.13□□□□□ -2.91
HMGN4O00479 Y_RNA.396-201ENST00000383949 103 ntBASIC-3.13□□□□□ -2.91
HMGN4O00479 RNU6-458P-201ENST00000384179 107 ntBASIC-3.13□□□□□ -2.91
HMGN4O00479 RNU6-506P-201ENST00000516553 94 ntBASIC-3.13□□□□□ -2.91
HMGN4O00479 U6.58-201ENST00000613107 107 ntBASIC-3.13□□□□□ -2.91
HMGN4O00479 RNU5F-1-201ENST00000362507 117 ntBASIC-3.14□□□□□ -2.91
HMGN4O00479 RNU6-832P-201ENST00000363319 107 ntBASIC-3.14□□□□□ -2.91
HMGN4O00479 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.14□□□□□ -2.91
HMGN4O00479 RNU6-768P-201ENST00000384683 107 ntBASIC-3.14□□□□□ -2.91
HMGN4O00479 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.14□□□□□ -2.91
HMGN4O00479 MIR548Z-201ENST00000584743 97 ntBASIC-3.14□□□□□ -2.91
HMGN4O00479 RNU6-230P-201ENST00000362457 104 ntBASIC-3.15□□□□□ -2.91
HMGN4O00479 Y_RNA.44-201ENST00000362676 108 ntBASIC-3.15□□□□□ -2.91
HMGN4O00479 RNU6-238P-201ENST00000363313 106 ntBASIC-3.15□□□□□ -2.91
HMGN4O00479 Y_RNA.213-201ENST00000364178 111 ntBASIC-3.15□□□□□ -2.91
HMGN4O00479 Y_RNA.252-201ENST00000364556 101 ntBASIC-3.15□□□□□ -2.91
HMGN4O00479 Y_RNA.507-201ENST00000384500 99 ntBASIC-3.15□□□□□ -2.91
HMGN4O00479 RNA5SP292-201ENST00000390974 118 ntBASIC-3.15□□□□□ -2.91
HMGN4O00479 MIR548I1-201ENST00000408810 149 ntBASIC-3.15□□□□□ -2.91
HMGN4O00479 SNORD4B-201ENST00000459083 72 ntBASIC-3.15□□□□□ -2.91
HMGN4O00479 AC078883.4-201ENST00000623218 367 ntBASIC-3.15□□□□□ -2.91
HMGN4O00479 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.16□□□□□ -2.92
HMGN4O00479 MIR548D2-201ENST00000384955 97 ntBASIC-3.16□□□□□ -2.92
HMGN4O00479 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.16□□□□□ -2.92
HMGN4O00479 U6.81-201ENST00000612550 106 ntBASIC-3.16□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms