Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 MIR3920-201ENST00000581751 86 ntBASIC1.4□□□□□ -2.19
RFXAPO00287 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
RFXAPO00287 RNU6-54P-201ENST00000365563 107 ntBASIC1.39□□□□□ -2.19
RFXAPO00287 MIR520F-201ENST00000384824 87 ntBASIC1.39□□□□□ -2.19
RFXAPO00287 MIR100-201ENST00000385259 80 ntBASIC1.39□□□□□ -2.19
RFXAPO00287 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.39□□□□□ -2.19
RFXAPO00287 RNU7-104P-201ENST00000459398 79 ntBASIC1.39□□□□□ -2.19
RFXAPO00287 RNU6-274P-201ENST00000459566 107 ntBASIC1.39□□□□□ -2.19
RFXAPO00287 SNORD79.1-201ENST00000516069 84 ntBASIC1.39□□□□□ -2.19
RFXAPO00287 RNU7-13P-201ENST00000516413 62 ntBASIC1.39□□□□□ -2.19
RFXAPO00287 RNU6-1057P-201ENST00000517162 102 ntBASIC1.38□□□□□ -2.19
RFXAPO00287 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
RFXAPO00287 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
RFXAPO00287 Y_RNA.30-201ENST00000362572 97 ntBASIC1.37□□□□□ -2.19
RFXAPO00287 RNU6-1216P-201ENST00000362590 107 ntBASIC1.37□□□□□ -2.19
RFXAPO00287 SNORD33-201ENST00000362761 85 ntBASIC1.37□□□□□ -2.19
RFXAPO00287 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RFXAPO00287 RNU1-119P-201ENST00000391122 165 ntBASIC1.37□□□□□ -2.19
RFXAPO00287 AL136317.1-201ENST00000612653 226 ntBASIC1.37□□□□□ -2.19
RFXAPO00287 MIR8053-201ENST00000613344 75 ntBASIC1.37□□□□□ -2.19
RFXAPO00287 RNU6-1187P-201ENST00000364771 110 ntBASIC1.36□□□□□ -2.19
RFXAPO00287 SNORA80D-201ENST00000384488 135 ntBASIC1.36□□□□□ -2.19
RFXAPO00287 MIR644A-201ENST00000385262 94 ntBASIC1.36□□□□□ -2.19
RFXAPO00287 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
RFXAPO00287 MIR519E-201ENST00000385075 84 ntBASIC1.35□□□□□ -2.19
RFXAPO00287 RNU1-78P-201ENST00000391248 165 ntBASIC1.35□□□□□ -2.19
RFXAPO00287 MTND4LP19-201ENST00000403051 166 ntBASIC1.35□□□□□ -2.19
RFXAPO00287 SNORD75.2-201ENST00000408784 58 ntBASIC1.35□□□□□ -2.19
RFXAPO00287 AC093423.1-201ENST00000440817 142 ntBASIC1.35□□□□□ -2.19
RFXAPO00287 SNORD42B-201ENST00000458893 67 ntBASIC1.35□□□□□ -2.19
RFXAPO00287 RNU7-90P-201ENST00000459216 62 ntBASIC1.35□□□□□ -2.19
RFXAPO00287 SNORA44.1-201ENST00000517031 108 ntBASIC1.35□□□□□ -2.19
RFXAPO00287 SNORD115-44-201ENST00000365391 82 ntBASIC1.34□□□□□ -2.19
RFXAPO00287 U3.27-201ENST00000391237 200 ntBASIC1.34□□□□□ -2.19
RFXAPO00287 AL691482.2-201ENST00000457453 84 ntBASIC1.34□□□□□ -2.19
RFXAPO00287 SNORA40.17-201ENST00000517256 115 ntBASIC1.34□□□□□ -2.19
RFXAPO00287 RNU6-495P-201ENST00000362995 107 ntBASIC1.33□□□□□ -2.2
RFXAPO00287 RNU6-1039P-201ENST00000383931 107 ntBASIC1.33□□□□□ -2.2
RFXAPO00287 MIR633-201ENST00000384821 98 ntBASIC1.33□□□□□ -2.2
RFXAPO00287 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
RFXAPO00287 MIR1827-201ENST00000408549 66 ntBASIC1.33□□□□□ -2.2
RFXAPO00287 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
RFXAPO00287 MIR3198-2-201ENST00000577868 80 ntBASIC1.33□□□□□ -2.2
RFXAPO00287 MIR4511-201ENST00000582784 87 ntBASIC1.33□□□□□ -2.2
RFXAPO00287 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RFXAPO00287 MIR1-1-201ENST00000362147 71 ntBASIC1.32□□□□□ -2.2
RFXAPO00287 RNU6-752P-201ENST00000516376 102 ntBASIC1.32□□□□□ -2.2
RFXAPO00287 MIR6509-201ENST00000614603 85 ntBASIC1.32□□□□□ -2.2
RFXAPO00287 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
RFXAPO00287 MIR548O2-201ENST00000616090 70 ntBASIC1.32□□□□□ -2.2
RFXAPO00287 RNU6V-201ENST00000384105 107 ntBASIC1.31□□□□□ -2.2
RFXAPO00287 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.31□□□□□ -2.2
RFXAPO00287 AC008834.1-201ENST00000511612 175 ntBASIC1.31□□□□□ -2.2
RFXAPO00287 MIR4422-201ENST00000581938 83 ntBASIC1.31□□□□□ -2.2
RFXAPO00287 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RFXAPO00287 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RFXAPO00287 RNU6-990P-201ENST00000364385 104 ntBASIC1.3□□□□□ -2.2
RFXAPO00287 MIR617-201ENST00000385030 97 ntBASIC1.3□□□□□ -2.2
RFXAPO00287 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.3□□□□□ -2.2
RFXAPO00287 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.3□□□□□ -2.2
RFXAPO00287 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RFXAPO00287 AC110620.1-201ENST00000416042 228 ntBASIC1.29□□□□□ -2.2
RFXAPO00287 AC002429.1-201ENST00000437672 148 ntBASIC1.29□□□□□ -2.2
RFXAPO00287 RN7SL793P-201ENST00000583259 296 ntBASIC1.29□□□□□ -2.2
RFXAPO00287 MIR3657-201ENST00000584818 117 ntBASIC1.29□□□□□ -2.2
RFXAPO00287 MIR4295-201ENST00000585286 85 ntBASIC1.29□□□□□ -2.2
RFXAPO00287 Y_RNA.174-201ENST00000363781 105 ntBASIC1.28□□□□□ -2.2
RFXAPO00287 RNU6-499P-201ENST00000365615 107 ntBASIC1.28□□□□□ -2.2
RFXAPO00287 RNU7-24P-201ENST00000458867 62 ntBASIC1.28□□□□□ -2.2
RFXAPO00287 AC002350.1-201ENST00000490759 375 ntBASIC1.28□□□□□ -2.2
RFXAPO00287 RNA5SP147-201ENST00000516493 109 ntBASIC1.28□□□□□ -2.2
RFXAPO00287 SNORA70.22-201ENST00000517160 124 ntBASIC1.28□□□□□ -2.2
RFXAPO00287 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
RFXAPO00287 MIR5000-201ENST00000577717 103 ntBASIC1.28□□□□□ -2.2
RFXAPO00287 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
RFXAPO00287 RNU6-1335P-201ENST00000365426 107 ntBASIC1.27□□□□□ -2.21
RFXAPO00287 RNU6-987P-201ENST00000384759 104 ntBASIC1.27□□□□□ -2.21
RFXAPO00287 AC067940.1-201ENST00000458411 300 ntBASIC1.27□□□□□ -2.21
RFXAPO00287 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
RFXAPO00287 AC244669.1-204ENST00000621564 178 ntBASIC1.27□□□□□ -2.21
RFXAPO00287 AC067863.3-201ENST00000624172 122 ntBASIC1.27□□□□□ -2.21
RFXAPO00287 AC103706.3-201ENST00000636297 85 ntBASIC1.27□□□□□ -2.21
RFXAPO00287 SNORD89-201ENST00000390981 114 ntBASIC1.26□□□□□ -2.21
RFXAPO00287 RNU6-645P-201ENST00000364649 106 ntBASIC1.25□□□□□ -2.21
RFXAPO00287 RNU4-37P-201ENST00000410214 84 ntBASIC1.25□□□□□ -2.21
RFXAPO00287 AC073869.9-201ENST00000641610 120 ntBASIC1.25□□□□□ -2.21
RFXAPO00287 MIR373-201ENST00000362273 69 ntBASIC1.24□□□□□ -2.21
RFXAPO00287 RNU6-716P-201ENST00000365621 103 ntBASIC1.24□□□□□ -2.21
RFXAPO00287 SNORD28-201ENST00000384706 75 ntBASIC1.24□□□□□ -2.21
RFXAPO00287 MIR216A-201ENST00000385063 110 ntBASIC1.24□□□□□ -2.21
RFXAPO00287 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.24□□□□□ -2.21
RFXAPO00287 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
RFXAPO00287 SNORD18A-201ENST00000363753 72 ntBASIC1.23□□□□□ -2.21
RFXAPO00287 RNU6-668P-201ENST00000364180 107 ntBASIC1.23□□□□□ -2.21
RFXAPO00287 SNORD41.1-201ENST00000391000 69 ntBASIC1.23□□□□□ -2.21
RFXAPO00287 AC092634.7-201ENST00000621022 103 ntBASIC1.23□□□□□ -2.21
RFXAPO00287 RNU6-669P-201ENST00000365575 107 ntBASIC1.22□□□□□ -2.21
RFXAPO00287 AC079150.2-201ENST00000443733 78 ntBASIC1.22□□□□□ -2.21
RFXAPO00287 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
RFXAPO00287 RNU6-726P-201ENST00000364680 107 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms