Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC163A0A0D9SF12 FGF7P7-201ENST00000514120 227 ntBASIC0.58□□□□□ -2.32
CCDC163A0A0D9SF12 RNU6-229P-201ENST00000516614 102 ntBASIC0.58□□□□□ -2.32
CCDC163A0A0D9SF12 RNA5SP170-201ENST00000517150 101 ntBASIC0.58□□□□□ -2.32
CCDC163A0A0D9SF12 MIR5582-201ENST00000579697 68 ntBASIC0.58□□□□□ -2.32
CCDC163A0A0D9SF12 MIR5087-201ENST00000635826 76 ntBASIC0.58□□□□□ -2.32
CCDC163A0A0D9SF12 SNORD44.1-201ENST00000363202 61 ntBASIC0.57□□□□□ -2.32
CCDC163A0A0D9SF12 MIR451A-201ENST00000385059 72 ntBASIC0.57□□□□□ -2.32
CCDC163A0A0D9SF12 RNU6-402P-201ENST00000410678 103 ntBASIC0.57□□□□□ -2.32
CCDC163A0A0D9SF12 RNA5SP484-201ENST00000458857 111 ntBASIC0.57□□□□□ -2.32
CCDC163A0A0D9SF12 SNORA18.5-201ENST00000516616 101 ntBASIC0.57□□□□□ -2.32
CCDC163A0A0D9SF12 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
CCDC163A0A0D9SF12 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.57□□□□□ -2.32
CCDC163A0A0D9SF12 MIR103A1-201ENST00000362165 78 ntBASIC0.56□□□□□ -2.32
CCDC163A0A0D9SF12 RNA5SP257-201ENST00000363023 116 ntBASIC0.56□□□□□ -2.32
CCDC163A0A0D9SF12 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
CCDC163A0A0D9SF12 AC006210.1-201ENST00000424882 111 ntBASIC0.56□□□□□ -2.32
CCDC163A0A0D9SF12 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.55□□□□□ -2.32
CCDC163A0A0D9SF12 Y_RNA.68-201ENST00000362881 102 ntBASIC0.55□□□□□ -2.32
CCDC163A0A0D9SF12 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
CCDC163A0A0D9SF12 SNORA2A-201ENST00000383885 135 ntBASIC0.55□□□□□ -2.32
CCDC163A0A0D9SF12 MIR1236-201ENST00000408340 102 ntBASIC0.55□□□□□ -2.32
CCDC163A0A0D9SF12 MIR4460-201ENST00000577862 86 ntBASIC0.55□□□□□ -2.32
CCDC163A0A0D9SF12 SNORA70.25-201ENST00000612741 95 ntBASIC0.55□□□□□ -2.32
CCDC163A0A0D9SF12 AC073869.9-201ENST00000641610 120 ntBASIC0.55□□□□□ -2.32
CCDC163A0A0D9SF12 MIRLET7D-201ENST00000362263 87 ntBASIC0.54□□□□□ -2.32
CCDC163A0A0D9SF12 RNU1-141P-201ENST00000364623 158 ntBASIC0.54□□□□□ -2.32
CCDC163A0A0D9SF12 SNORD110-201ENST00000408189 75 ntBASIC0.54□□□□□ -2.32
CCDC163A0A0D9SF12 RNU7-129P-201ENST00000516128 62 ntBASIC0.54□□□□□ -2.32
CCDC163A0A0D9SF12 RNU6-267P-201ENST00000516714 103 ntBASIC0.54□□□□□ -2.32
CCDC163A0A0D9SF12 VTRNA1-3-201ENST00000365645 89 ntBASIC0.53□□□□□ -2.32
CCDC163A0A0D9SF12 AC243829.6-201ENST00000612652 106 ntBASIC0.53□□□□□ -2.32
CCDC163A0A0D9SF12 SNORD115-27-201ENST00000364430 82 ntBASIC0.52□□□□□ -2.33
CCDC163A0A0D9SF12 RNU6-294P-201ENST00000364999 102 ntBASIC0.52□□□□□ -2.33
CCDC163A0A0D9SF12 MIR519C-201ENST00000385053 87 ntBASIC0.52□□□□□ -2.33
CCDC163A0A0D9SF12 RNU7-153P-201ENST00000516455 62 ntBASIC0.52□□□□□ -2.33
CCDC163A0A0D9SF12 Y_RNA.17-201ENST00000362433 111 ntBASIC0.51□□□□□ -2.33
CCDC163A0A0D9SF12 Y_RNA.433-201ENST00000384089 102 ntBASIC0.51□□□□□ -2.33
CCDC163A0A0D9SF12 MIR760-201ENST00000390220 80 ntBASIC0.51□□□□□ -2.33
CCDC163A0A0D9SF12 IGLL4P-201ENST00000614590 133 ntBASIC0.51□□□□□ -2.33
CCDC163A0A0D9SF12 MIR6755-201ENST00000619993 66 ntBASIC0.51□□□□□ -2.33
CCDC163A0A0D9SF12 RNU6-1298P-201ENST00000362456 101 ntBASIC0.5□□□□□ -2.33
CCDC163A0A0D9SF12 Y_RNA.178-201ENST00000363832 102 ntBASIC0.5□□□□□ -2.33
CCDC163A0A0D9SF12 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
CCDC163A0A0D9SF12 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
CCDC163A0A0D9SF12 MIR1197-201ENST00000408818 88 ntBASIC0.5□□□□□ -2.33
CCDC163A0A0D9SF12 Y_RNA.620-201ENST00000411009 88 ntBASIC0.5□□□□□ -2.33
CCDC163A0A0D9SF12 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
CCDC163A0A0D9SF12 MIR5706-201ENST00000579841 80 ntBASIC0.5□□□□□ -2.33
CCDC163A0A0D9SF12 MIR4796-201ENST00000580742 81 ntBASIC0.5□□□□□ -2.33
CCDC163A0A0D9SF12 MIR3140-201ENST00000583685 90 ntBASIC0.5□□□□□ -2.33
CCDC163A0A0D9SF12 RNA5SP62-201ENST00000363457 110 ntBASIC0.49□□□□□ -2.33
CCDC163A0A0D9SF12 SNORD115-37-201ENST00000363768 82 ntBASIC0.49□□□□□ -2.33
CCDC163A0A0D9SF12 AC073261.1-201ENST00000429409 121 ntBASIC0.49□□□□□ -2.33
CCDC163A0A0D9SF12 RNU5B-6P-201ENST00000516765 68 ntBASIC0.49□□□□□ -2.33
CCDC163A0A0D9SF12 YWHAEP2-201ENST00000580066 112 ntBASIC0.49□□□□□ -2.33
CCDC163A0A0D9SF12 RNU6-633P-201ENST00000362612 103 ntBASIC0.48□□□□□ -2.33
CCDC163A0A0D9SF12 RNY1P1-201ENST00000364372 112 ntBASIC0.48□□□□□ -2.33
CCDC163A0A0D9SF12 RNY4P3-201ENST00000365254 95 ntBASIC0.48□□□□□ -2.33
CCDC163A0A0D9SF12 RNU6-1051P-201ENST00000365471 102 ntBASIC0.48□□□□□ -2.33
CCDC163A0A0D9SF12 Y_RNA.369-201ENST00000365568 117 ntBASIC0.48□□□□□ -2.33
CCDC163A0A0D9SF12 Y_RNA.611-201ENST00000410682 108 ntBASIC0.48□□□□□ -2.33
CCDC163A0A0D9SF12 RNU6-863P-201ENST00000515989 104 ntBASIC0.48□□□□□ -2.33
CCDC163A0A0D9SF12 RNU6-1232P-201ENST00000516299 86 ntBASIC0.48□□□□□ -2.33
CCDC163A0A0D9SF12 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CCDC163A0A0D9SF12 MIR216B-201ENST00000390186 82 ntBASIC0.47□□□□□ -2.33
CCDC163A0A0D9SF12 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
CCDC163A0A0D9SF12 MIR4473-201ENST00000583731 91 ntBASIC0.47□□□□□ -2.33
CCDC163A0A0D9SF12 RNU6-219P-201ENST00000364728 107 ntBASIC0.46□□□□□ -2.34
CCDC163A0A0D9SF12 RNU1-29P-201ENST00000606574 126 ntBASIC0.46□□□□□ -2.34
CCDC163A0A0D9SF12 MIR499B-201ENST00000636498 73 ntBASIC0.46□□□□□ -2.34
CCDC163A0A0D9SF12 RNU6-815P-201ENST00000384080 113 ntBASIC0.45□□□□□ -2.34
CCDC163A0A0D9SF12 Y_RNA.558-201ENST00000384685 113 ntBASIC0.45□□□□□ -2.34
CCDC163A0A0D9SF12 SNORD90-201ENST00000391145 111 ntBASIC0.45□□□□□ -2.34
CCDC163A0A0D9SF12 U3.27-201ENST00000391237 200 ntBASIC0.45□□□□□ -2.34
CCDC163A0A0D9SF12 AC093423.1-201ENST00000440817 142 ntBASIC0.45□□□□□ -2.34
CCDC163A0A0D9SF12 SNORA62.5-201ENST00000516634 120 ntBASIC0.45□□□□□ -2.34
CCDC163A0A0D9SF12 U7.6-201ENST00000610841 64 ntBASIC0.45□□□□□ -2.34
CCDC163A0A0D9SF12 AC090625.1-201ENST00000357130 210 ntBASIC0.44□□□□□ -2.34
CCDC163A0A0D9SF12 SNORA63.2-201ENST00000362603 126 ntBASIC0.44□□□□□ -2.34
CCDC163A0A0D9SF12 RNU6-1255P-201ENST00000363434 112 ntBASIC0.44□□□□□ -2.34
CCDC163A0A0D9SF12 RNU6V-201ENST00000384105 107 ntBASIC0.44□□□□□ -2.34
CCDC163A0A0D9SF12 MT-TY-201ENST00000387409 66 ntBASIC0.44□□□□□ -2.34
CCDC163A0A0D9SF12 Y_RNA.593-201ENST00000410292 98 ntBASIC0.44□□□□□ -2.34
CCDC163A0A0D9SF12 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.44□□□□□ -2.34
CCDC163A0A0D9SF12 AC069503.3-201ENST00000618674 145 ntBASIC0.44□□□□□ -2.34
CCDC163A0A0D9SF12 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
CCDC163A0A0D9SF12 SNORA9.1-201ENST00000362412 131 ntBASIC0.43□□□□□ -2.34
CCDC163A0A0D9SF12 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.43□□□□□ -2.34
CCDC163A0A0D9SF12 AC023932.2-201ENST00000603176 175 ntBASIC0.43□□□□□ -2.34
CCDC163A0A0D9SF12 MIR548BB-201ENST00000626714 66 ntBASIC0.43□□□□□ -2.34
CCDC163A0A0D9SF12 MIR494-201ENST00000349529 81 ntBASIC0.42□□□□□ -2.34
CCDC163A0A0D9SF12 RNA5SP128-201ENST00000365305 116 ntBASIC0.42□□□□□ -2.34
CCDC163A0A0D9SF12 AC093729.1-201ENST00000513074 128 ntBASIC0.42□□□□□ -2.34
CCDC163A0A0D9SF12 RNA5SP395-201ENST00000516567 118 ntBASIC0.42□□□□□ -2.34
CCDC163A0A0D9SF12 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.42□□□□□ -2.34
CCDC163A0A0D9SF12 AC006254.2-201ENST00000603259 279 ntBASIC0.42□□□□□ -2.34
CCDC163A0A0D9SF12 RNA5SP63-201ENST00000391225 112 ntBASIC0.41□□□□□ -2.34
CCDC163A0A0D9SF12 RNA5SP134-201ENST00000516492 96 ntBASIC0.41□□□□□ -2.34
CCDC163A0A0D9SF12 MIR2909-201ENST00000617113 69 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms