Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 RNU6-208P-201ENST00000362431 107 ntBASIC1.44□□□□□ -2.18
PCDHA11Q9Y5I1 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
PCDHA11Q9Y5I1 SNORA25-201ENST00000384384 134 ntBASIC1.44□□□□□ -2.18
PCDHA11Q9Y5I1 SNORA40.6-201ENST00000391153 128 ntBASIC1.44□□□□□ -2.18
PCDHA11Q9Y5I1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.44□□□□□ -2.18
PCDHA11Q9Y5I1 MIR1827-201ENST00000408549 66 ntBASIC1.44□□□□□ -2.18
PCDHA11Q9Y5I1 Y_RNA.596-201ENST00000410462 109 ntBASIC1.44□□□□□ -2.18
PCDHA11Q9Y5I1 AC073261.1-201ENST00000429409 121 ntBASIC1.44□□□□□ -2.18
PCDHA11Q9Y5I1 RNU6-1051P-201ENST00000365471 102 ntBASIC1.43□□□□□ -2.18
PCDHA11Q9Y5I1 AC067940.1-201ENST00000458411 300 ntBASIC1.43□□□□□ -2.18
PCDHA11Q9Y5I1 AC004223.1-201ENST00000479840 271 ntBASIC1.43□□□□□ -2.18
PCDHA11Q9Y5I1 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.43□□□□□ -2.18
PCDHA11Q9Y5I1 SNORD114-27-201ENST00000363766 70 ntBASIC1.42□□□□□ -2.18
PCDHA11Q9Y5I1 Y_RNA.532-201ENST00000384590 113 ntBASIC1.42□□□□□ -2.18
PCDHA11Q9Y5I1 MIR520F-201ENST00000384824 87 ntBASIC1.42□□□□□ -2.18
PCDHA11Q9Y5I1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
PCDHA11Q9Y5I1 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
PCDHA11Q9Y5I1 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
PCDHA11Q9Y5I1 Y_RNA.788-201ENST00000622394 112 ntBASIC1.42□□□□□ -2.18
PCDHA11Q9Y5I1 RNU5F-1-201ENST00000362507 117 ntBASIC1.41□□□□□ -2.18
PCDHA11Q9Y5I1 Y_RNA.545-201ENST00000384652 105 ntBASIC1.41□□□□□ -2.18
PCDHA11Q9Y5I1 MIR222-201ENST00000384992 110 ntBASIC1.41□□□□□ -2.18
PCDHA11Q9Y5I1 MIR548J-201ENST00000408833 112 ntBASIC1.41□□□□□ -2.18
PCDHA11Q9Y5I1 AC002429.1-201ENST00000437672 148 ntBASIC1.41□□□□□ -2.18
PCDHA11Q9Y5I1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.41□□□□□ -2.18
PCDHA11Q9Y5I1 SCARNA18B-201ENST00000458806 135 ntBASIC1.41□□□□□ -2.18
PCDHA11Q9Y5I1 Y_RNA.32-201ENST00000362589 110 ntBASIC1.4□□□□□ -2.19
PCDHA11Q9Y5I1 RNY4P3-201ENST00000365254 95 ntBASIC1.4□□□□□ -2.19
PCDHA11Q9Y5I1 Y_RNA.565-201ENST00000384719 101 ntBASIC1.4□□□□□ -2.19
PCDHA11Q9Y5I1 RNU6-935P-201ENST00000410371 100 ntBASIC1.4□□□□□ -2.19
PCDHA11Q9Y5I1 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.4□□□□□ -2.19
PCDHA11Q9Y5I1 uc_338.16-201ENST00000621804 95 ntBASIC1.4□□□□□ -2.19
PCDHA11Q9Y5I1 MIR1297-201ENST00000637311 77 ntBASIC1.4□□□□□ -2.19
PCDHA11Q9Y5I1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PCDHA11Q9Y5I1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
PCDHA11Q9Y5I1 Y_RNA.207-201ENST00000364142 106 ntBASIC1.39□□□□□ -2.19
PCDHA11Q9Y5I1 SNORA31.14-201ENST00000516728 116 ntBASIC1.39□□□□□ -2.19
PCDHA11Q9Y5I1 RNU6-807P-201ENST00000516805 107 ntBASIC1.39□□□□□ -2.19
PCDHA11Q9Y5I1 RNU6-303P-201ENST00000517091 106 ntBASIC1.39□□□□□ -2.19
PCDHA11Q9Y5I1 Y_RNA.174-201ENST00000363781 105 ntBASIC1.38□□□□□ -2.19
PCDHA11Q9Y5I1 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
PCDHA11Q9Y5I1 snoU13.17-201ENST00000458802 104 ntBASIC1.38□□□□□ -2.19
PCDHA11Q9Y5I1 MIR6767-201ENST00000637302 66 ntBASIC1.38□□□□□ -2.19
PCDHA11Q9Y5I1 Y_RNA.12-201ENST00000362393 112 ntBASIC1.37□□□□□ -2.19
PCDHA11Q9Y5I1 MIR19B1-201ENST00000384829 87 ntBASIC1.37□□□□□ -2.19
PCDHA11Q9Y5I1 AC074348.1-201ENST00000426503 132 ntBASIC1.37□□□□□ -2.19
PCDHA11Q9Y5I1 YWHAEP2-201ENST00000580066 112 ntBASIC1.37□□□□□ -2.19
PCDHA11Q9Y5I1 YWHAEP3-201ENST00000582767 121 ntBASIC1.37□□□□□ -2.19
PCDHA11Q9Y5I1 MIR3140-201ENST00000583685 90 ntBASIC1.37□□□□□ -2.19
PCDHA11Q9Y5I1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
PCDHA11Q9Y5I1 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
PCDHA11Q9Y5I1 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
PCDHA11Q9Y5I1 SNORD115-44-201ENST00000365391 82 ntBASIC1.36□□□□□ -2.19
PCDHA11Q9Y5I1 MIR451A-201ENST00000385059 72 ntBASIC1.36□□□□□ -2.19
PCDHA11Q9Y5I1 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
PCDHA11Q9Y5I1 MIR3134-201ENST00000579433 74 ntBASIC1.36□□□□□ -2.19
PCDHA11Q9Y5I1 MIR4484-201ENST00000582855 83 ntBASIC1.36□□□□□ -2.19
PCDHA11Q9Y5I1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.36□□□□□ -2.19
PCDHA11Q9Y5I1 RNU6-523P-201ENST00000516304 54 ntBASIC1.35□□□□□ -2.19
PCDHA11Q9Y5I1 SNORD115-24-201ENST00000363528 82 ntBASIC1.34□□□□□ -2.19
PCDHA11Q9Y5I1 RNA5SP403-201ENST00000363598 108 ntBASIC1.34□□□□□ -2.19
PCDHA11Q9Y5I1 Y_RNA.205-201ENST00000364128 113 ntBASIC1.34□□□□□ -2.19
PCDHA11Q9Y5I1 SNORA24B-201ENST00000384176 131 ntBASIC1.34□□□□□ -2.19
PCDHA11Q9Y5I1 RNU7-13P-201ENST00000516413 62 ntBASIC1.34□□□□□ -2.19
PCDHA11Q9Y5I1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.34□□□□□ -2.19
PCDHA11Q9Y5I1 AL136317.1-201ENST00000612653 226 ntBASIC1.34□□□□□ -2.19
PCDHA11Q9Y5I1 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
PCDHA11Q9Y5I1 AC139453.2-201ENST00000487255 133 ntBASIC1.33□□□□□ -2.2
PCDHA11Q9Y5I1 RNU6-287P-201ENST00000516230 98 ntBASIC1.33□□□□□ -2.2
PCDHA11Q9Y5I1 RNU6-1057P-201ENST00000517162 102 ntBASIC1.33□□□□□ -2.2
PCDHA11Q9Y5I1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.33□□□□□ -2.2
PCDHA11Q9Y5I1 RNU1-124P-201ENST00000363861 145 ntBASIC1.32□□□□□ -2.2
PCDHA11Q9Y5I1 RNU6-411P-201ENST00000384451 107 ntBASIC1.32□□□□□ -2.2
PCDHA11Q9Y5I1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
PCDHA11Q9Y5I1 FABP5P4-201ENST00000437203 171 ntBASIC1.32□□□□□ -2.2
PCDHA11Q9Y5I1 AC002350.1-201ENST00000490759 375 ntBASIC1.32□□□□□ -2.2
PCDHA11Q9Y5I1 RNU7-161P-201ENST00000517289 62 ntBASIC1.32□□□□□ -2.2
PCDHA11Q9Y5I1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.32□□□□□ -2.2
PCDHA11Q9Y5I1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
PCDHA11Q9Y5I1 RNU6-340P-201ENST00000364005 107 ntBASIC1.31□□□□□ -2.2
PCDHA11Q9Y5I1 SNORD89-201ENST00000390981 114 ntBASIC1.31□□□□□ -2.2
PCDHA11Q9Y5I1 RNU2-59P-201ENST00000410482 191 ntBASIC1.31□□□□□ -2.2
PCDHA11Q9Y5I1 U7.7-201ENST00000459276 60 ntBASIC1.31□□□□□ -2.2
PCDHA11Q9Y5I1 AC087343.1-201ENST00000477341 475 ntBASIC1.31□□□□□ -2.2
PCDHA11Q9Y5I1 RNA5SP404-201ENST00000517118 132 ntBASIC1.31□□□□□ -2.2
PCDHA11Q9Y5I1 MIR4295-201ENST00000585286 85 ntBASIC1.31□□□□□ -2.2
PCDHA11Q9Y5I1 RNU6-1126P-201ENST00000384002 107 ntBASIC1.3□□□□□ -2.2
PCDHA11Q9Y5I1 MIR200A-201ENST00000384875 90 ntBASIC1.3□□□□□ -2.2
PCDHA11Q9Y5I1 SNORD105-201ENST00000386910 85 ntBASIC1.3□□□□□ -2.2
PCDHA11Q9Y5I1 U3.27-201ENST00000391237 200 ntBASIC1.3□□□□□ -2.2
PCDHA11Q9Y5I1 Y_RNA.606-201ENST00000410579 103 ntBASIC1.3□□□□□ -2.2
PCDHA11Q9Y5I1 MIR2113-201ENST00000459007 91 ntBASIC1.3□□□□□ -2.2
PCDHA11Q9Y5I1 AC097510.1-201ENST00000510945 133 ntBASIC1.3□□□□□ -2.2
PCDHA11Q9Y5I1 Y_RNA.681-201ENST00000516445 113 ntBASIC1.3□□□□□ -2.2
PCDHA11Q9Y5I1 RNU6-135P-201ENST00000516769 101 ntBASIC1.3□□□□□ -2.2
PCDHA11Q9Y5I1 MIR3920-201ENST00000581751 86 ntBASIC1.3□□□□□ -2.2
PCDHA11Q9Y5I1 RNA5SP117-201ENST00000365294 118 ntBASIC1.29□□□□□ -2.2
PCDHA11Q9Y5I1 Y_RNA.371-201ENST00000365591 113 ntBASIC1.29□□□□□ -2.2
PCDHA11Q9Y5I1 RNU6-1052P-201ENST00000411398 104 ntBASIC1.29□□□□□ -2.2
PCDHA11Q9Y5I1 RNU6-70P-201ENST00000516438 60 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms