Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SNORD118-201ENST00000363593 134 ntBASIC0.78□□□□□ -2.28
R3HCC1Q9Y3T6 Y_RNA.220-201ENST00000364244 109 ntBASIC0.78□□□□□ -2.28
R3HCC1Q9Y3T6 MIR548J-201ENST00000408833 112 ntBASIC0.78□□□□□ -2.28
R3HCC1Q9Y3T6 SNORA40.8-201ENST00000411034 126 ntBASIC0.78□□□□□ -2.28
R3HCC1Q9Y3T6 RNU4-54P-201ENST00000516428 129 ntBASIC0.78□□□□□ -2.28
R3HCC1Q9Y3T6 MIR4696-201ENST00000581431 70 ntBASIC0.78□□□□□ -2.28
R3HCC1Q9Y3T6 RNU6-1126P-201ENST00000384002 107 ntBASIC0.77□□□□□ -2.29
R3HCC1Q9Y3T6 RNU6-287P-201ENST00000516230 98 ntBASIC0.77□□□□□ -2.29
R3HCC1Q9Y3T6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.77□□□□□ -2.29
R3HCC1Q9Y3T6 MIRLET7F1-201ENST00000362202 87 ntBASIC0.76□□□□□ -2.29
R3HCC1Q9Y3T6 RNU6-664P-201ENST00000362381 107 ntBASIC0.76□□□□□ -2.29
R3HCC1Q9Y3T6 Y_RNA.207-201ENST00000364142 106 ntBASIC0.76□□□□□ -2.29
R3HCC1Q9Y3T6 RNU6-132P-201ENST00000383863 107 ntBASIC0.76□□□□□ -2.29
R3HCC1Q9Y3T6 SNORD101-201ENST00000384027 73 ntBASIC0.76□□□□□ -2.29
R3HCC1Q9Y3T6 MIR518A1-201ENST00000385068 85 ntBASIC0.76□□□□□ -2.29
R3HCC1Q9Y3T6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.76□□□□□ -2.29
R3HCC1Q9Y3T6 AC018659.1-201ENST00000551083 169 ntBASIC0.76□□□□□ -2.29
R3HCC1Q9Y3T6 SNORD115-44-201ENST00000365391 82 ntBASIC0.75□□□□□ -2.29
R3HCC1Q9Y3T6 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
R3HCC1Q9Y3T6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
R3HCC1Q9Y3T6 RNU6-269P-201ENST00000391077 97 ntBASIC0.74□□□□□ -2.29
R3HCC1Q9Y3T6 RNU6-1223P-201ENST00000517124 104 ntBASIC0.74□□□□□ -2.29
R3HCC1Q9Y3T6 RNU6-844P-201ENST00000517175 102 ntBASIC0.74□□□□□ -2.29
R3HCC1Q9Y3T6 MIR5582-201ENST00000579697 68 ntBASIC0.74□□□□□ -2.29
R3HCC1Q9Y3T6 AL162376.1-201ENST00000624117 175 ntBASIC0.74□□□□□ -2.29
R3HCC1Q9Y3T6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
R3HCC1Q9Y3T6 Y_RNA.540-201ENST00000384638 111 ntBASIC0.73□□□□□ -2.29
R3HCC1Q9Y3T6 AC069271.1-201ENST00000445577 156 ntBASIC0.73□□□□□ -2.29
R3HCC1Q9Y3T6 MIR2113-201ENST00000459007 91 ntBASIC0.73□□□□□ -2.29
R3HCC1Q9Y3T6 RNA5SP436-201ENST00000516020 115 ntBASIC0.73□□□□□ -2.29
R3HCC1Q9Y3T6 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
R3HCC1Q9Y3T6 MIR6515-201ENST00000619843 57 ntBASIC0.73□□□□□ -2.29
R3HCC1Q9Y3T6 RNY1P4-201ENST00000384595 115 ntBASIC0.72□□□□□ -2.29
R3HCC1Q9Y3T6 SNORD71-201ENST00000411292 86 ntBASIC0.72□□□□□ -2.29
R3HCC1Q9Y3T6 RN7SKP12-201ENST00000516275 143 ntBASIC0.72□□□□□ -2.29
R3HCC1Q9Y3T6 RNA5SP170-201ENST00000517150 101 ntBASIC0.72□□□□□ -2.29
R3HCC1Q9Y3T6 MIR3064-201ENST00000581130 66 ntBASIC0.72□□□□□ -2.29
R3HCC1Q9Y3T6 PVT1_3.1-201ENST00000620853 95 ntBASIC0.72□□□□□ -2.29
R3HCC1Q9Y3T6 RNU4-32P-201ENST00000363404 141 ntBASIC0.71□□□□□ -2.3
R3HCC1Q9Y3T6 AC098934.3-201ENST00000430450 190 ntBASIC0.71□□□□□ -2.3
R3HCC1Q9Y3T6 MIR4752-201ENST00000579672 72 ntBASIC0.71□□□□□ -2.3
R3HCC1Q9Y3T6 MIR4668-201ENST00000582284 70 ntBASIC0.71□□□□□ -2.3
R3HCC1Q9Y3T6 MIR617-201ENST00000385030 97 ntBASIC0.7□□□□□ -2.3
R3HCC1Q9Y3T6 MIR519E-201ENST00000385075 84 ntBASIC0.7□□□□□ -2.3
R3HCC1Q9Y3T6 RNA5SP292-201ENST00000390974 118 ntBASIC0.7□□□□□ -2.3
R3HCC1Q9Y3T6 SNORA68.3-201ENST00000515906 83 ntBASIC0.7□□□□□ -2.3
R3HCC1Q9Y3T6 RNA5SP121-201ENST00000516537 101 ntBASIC0.7□□□□□ -2.3
R3HCC1Q9Y3T6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.7□□□□□ -2.3
R3HCC1Q9Y3T6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
R3HCC1Q9Y3T6 Y_RNA.239-201ENST00000364444 113 ntBASIC0.69□□□□□ -2.3
R3HCC1Q9Y3T6 RNU6-811P-201ENST00000384069 107 ntBASIC0.69□□□□□ -2.3
R3HCC1Q9Y3T6 MIR92A1-201ENST00000385233 78 ntBASIC0.69□□□□□ -2.3
R3HCC1Q9Y3T6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.69□□□□□ -2.3
R3HCC1Q9Y3T6 AC104996.3-201ENST00000590718 94 ntBASIC0.69□□□□□ -2.3
R3HCC1Q9Y3T6 uc_338.17-201ENST00000619633 179 ntBASIC0.69□□□□□ -2.3
R3HCC1Q9Y3T6 SNORD115-27-201ENST00000364430 82 ntBASIC0.68□□□□□ -2.3
R3HCC1Q9Y3T6 SNORD116-22-201ENST00000384430 92 ntBASIC0.68□□□□□ -2.3
R3HCC1Q9Y3T6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
R3HCC1Q9Y3T6 AL157398.1-201ENST00000452981 186 ntBASIC0.68□□□□□ -2.3
R3HCC1Q9Y3T6 RNU6-267P-201ENST00000516714 103 ntBASIC0.68□□□□□ -2.3
R3HCC1Q9Y3T6 RNA5SP480-201ENST00000516840 109 ntBASIC0.68□□□□□ -2.3
R3HCC1Q9Y3T6 MIR4714-201ENST00000580728 77 ntBASIC0.68□□□□□ -2.3
R3HCC1Q9Y3T6 RNU6-219P-201ENST00000364728 107 ntBASIC0.67□□□□□ -2.3
R3HCC1Q9Y3T6 MIR548U-201ENST00000390728 81 ntBASIC0.67□□□□□ -2.3
R3HCC1Q9Y3T6 RNU6-402P-201ENST00000410678 103 ntBASIC0.67□□□□□ -2.3
R3HCC1Q9Y3T6 Y_RNA.620-201ENST00000411009 88 ntBASIC0.67□□□□□ -2.3
R3HCC1Q9Y3T6 RNU1-29P-201ENST00000606574 126 ntBASIC0.67□□□□□ -2.3
R3HCC1Q9Y3T6 Y_RNA.369-201ENST00000365568 117 ntBASIC0.66□□□□□ -2.3
R3HCC1Q9Y3T6 MIR7-2-201ENST00000384970 110 ntBASIC0.66□□□□□ -2.3
R3HCC1Q9Y3T6 RNU6-935P-201ENST00000410371 100 ntBASIC0.66□□□□□ -2.3
R3HCC1Q9Y3T6 RNU7-74P-201ENST00000459104 62 ntBASIC0.66□□□□□ -2.3
R3HCC1Q9Y3T6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
R3HCC1Q9Y3T6 SNORD44.1-201ENST00000363202 61 ntBASIC0.65□□□□□ -2.31
R3HCC1Q9Y3T6 Y_RNA.491-201ENST00000384417 107 ntBASIC0.65□□□□□ -2.31
R3HCC1Q9Y3T6 RNU2-59P-201ENST00000410482 191 ntBASIC0.65□□□□□ -2.31
R3HCC1Q9Y3T6 RNA5SP484-201ENST00000458857 111 ntBASIC0.65□□□□□ -2.31
R3HCC1Q9Y3T6 Y_RNA.17-201ENST00000362433 111 ntBASIC0.64□□□□□ -2.31
R3HCC1Q9Y3T6 RNU6-1134P-201ENST00000365156 101 ntBASIC0.64□□□□□ -2.31
R3HCC1Q9Y3T6 MIR598-201ENST00000384868 97 ntBASIC0.64□□□□□ -2.31
R3HCC1Q9Y3T6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.64□□□□□ -2.31
R3HCC1Q9Y3T6 AC093423.1-201ENST00000440817 142 ntBASIC0.64□□□□□ -2.31
R3HCC1Q9Y3T6 SNORA18.5-201ENST00000516616 101 ntBASIC0.64□□□□□ -2.31
R3HCC1Q9Y3T6 SNORA70.25-201ENST00000612741 95 ntBASIC0.64□□□□□ -2.31
R3HCC1Q9Y3T6 MIR6755-201ENST00000619993 66 ntBASIC0.64□□□□□ -2.31
R3HCC1Q9Y3T6 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.64□□□□□ -2.31
R3HCC1Q9Y3T6 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
R3HCC1Q9Y3T6 RNU6-633P-201ENST00000362612 103 ntBASIC0.63□□□□□ -2.31
R3HCC1Q9Y3T6 RNU6-294P-201ENST00000364999 102 ntBASIC0.63□□□□□ -2.31
R3HCC1Q9Y3T6 MIR451A-201ENST00000385059 72 ntBASIC0.63□□□□□ -2.31
R3HCC1Q9Y3T6 Y_RNA.593-201ENST00000410292 98 ntBASIC0.63□□□□□ -2.31
R3HCC1Q9Y3T6 MIR103A1-201ENST00000362165 78 ntBASIC0.62□□□□□ -2.31
R3HCC1Q9Y3T6 MIRLET7D-201ENST00000362263 87 ntBASIC0.62□□□□□ -2.31
R3HCC1Q9Y3T6 RNU6-509P-201ENST00000363519 107 ntBASIC0.62□□□□□ -2.31
R3HCC1Q9Y3T6 RNU1-141P-201ENST00000364623 158 ntBASIC0.62□□□□□ -2.31
R3HCC1Q9Y3T6 Y_RNA.423-201ENST00000384057 113 ntBASIC0.62□□□□□ -2.31
R3HCC1Q9Y3T6 RNU7-153P-201ENST00000516455 62 ntBASIC0.62□□□□□ -2.31
R3HCC1Q9Y3T6 RNU6-1057P-201ENST00000517162 102 ntBASIC0.62□□□□□ -2.31
R3HCC1Q9Y3T6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.62□□□□□ -2.31
R3HCC1Q9Y3T6 SNORD90-201ENST00000391145 111 ntBASIC0.61□□□□□ -2.31
R3HCC1Q9Y3T6 MIR1236-201ENST00000408340 102 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms