Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNU6-957P-201ENST00000363652 99 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 RNU6-675P-201ENST00000384236 104 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 Y_RNA.620-201ENST00000411009 88 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 RNU6-469P-201ENST00000516253 101 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 AC011195.1-201ENST00000578177 177 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 MIR4536-1-201ENST00000583537 88 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 MIR330-201ENST00000362196 94 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 MIR18A-201ENST00000362310 71 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 Y_RNA.17-201ENST00000362433 111 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 RNU6-1134P-201ENST00000365156 101 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 SNORD28-201ENST00000384706 75 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 MIR644A-201ENST00000385262 94 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 RNU6-75P-201ENST00000515944 104 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 RNU6-65P-201ENST00000516332 98 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 MIR3678-201ENST00000578455 94 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 MTRNR2L2-201ENST00000604882 87 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 TRDV1-202ENST00000621643 102 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
DKK3Q9UBP4 RNU6-633P-201ENST00000362612 103 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 SNORD115-24-201ENST00000363528 82 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 RNU6-219P-201ENST00000364728 107 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 RNU6-35P-201ENST00000384530 107 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.82□□□□□ -2.28
DKK3Q9UBP4 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 SNORD18A-201ENST00000363753 72 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 RNU6-497P-201ENST00000365316 104 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 MIR450A2-201ENST00000385022 100 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 Y_RNA.593-201ENST00000410292 98 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 RNU6-402P-201ENST00000410678 103 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 RNU7-161P-201ENST00000517289 62 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.8□□□□□ -2.28
DKK3Q9UBP4 RNA5SP47-201ENST00000517230 109 ntBASIC0.8□□□□□ -2.28
DKK3Q9UBP4 MIR4679-1-201ENST00000637619 75 ntBASIC0.8□□□□□ -2.28
DKK3Q9UBP4 SNORD115-44-201ENST00000365391 82 ntBASIC0.79□□□□□ -2.28
DKK3Q9UBP4 RNU6-820P-201ENST00000384273 107 ntBASIC0.79□□□□□ -2.28
DKK3Q9UBP4 MIR1302-4-201ENST00000408701 150 ntBASIC0.79□□□□□ -2.28
DKK3Q9UBP4 Y_RNA.596-201ENST00000410462 109 ntBASIC0.79□□□□□ -2.28
DKK3Q9UBP4 AC244669.1-204ENST00000621564 178 ntBASIC0.79□□□□□ -2.28
DKK3Q9UBP4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.78□□□□□ -2.28
DKK3Q9UBP4 SNORD73B-201ENST00000364394 72 ntBASIC0.78□□□□□ -2.28
DKK3Q9UBP4 MIR6828-201ENST00000636181 60 ntBASIC0.78□□□□□ -2.28
DKK3Q9UBP4 U6.100-201ENST00000636230 99 ntBASIC0.78□□□□□ -2.28
DKK3Q9UBP4 RNU6-509P-201ENST00000363519 107 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 RNU6-811P-201ENST00000384069 107 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 RNU6-110P-201ENST00000384508 104 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 MIR548U-201ENST00000390728 81 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 MIR1236-201ENST00000408340 102 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 IGLL4P-201ENST00000614590 133 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 AC067863.3-201ENST00000624172 122 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
DKK3Q9UBP4 RNU6-664P-201ENST00000362381 107 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 SNORD101-201ENST00000384027 73 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR519C-201ENST00000385053 87 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.76□□□□□ -2.29
DKK3Q9UBP4 RNU7-13P-201ENST00000516413 62 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 RNU6-267P-201ENST00000516714 103 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR3064-201ENST00000581130 66 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR4696-201ENST00000581431 70 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR3920-201ENST00000581751 86 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR6086-201ENST00000638065 55 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 RNY1P1-201ENST00000364372 112 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 SNORD41.1-201ENST00000391000 69 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 RNA5SP222-201ENST00000411039 105 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 AC098934.3-201ENST00000430450 190 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 RNU6-762P-201ENST00000517107 102 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 AC104996.3-201ENST00000590718 94 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 RNU6-726P-201ENST00000364680 107 ntBASIC0.74□□□□□ -2.29
DKK3Q9UBP4 RNU6-132P-201ENST00000383863 107 ntBASIC0.74□□□□□ -2.29
DKK3Q9UBP4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
DKK3Q9UBP4 RNU7-104P-201ENST00000459398 79 ntBASIC0.74□□□□□ -2.29
DKK3Q9UBP4 RNA5SP94-201ENST00000516917 108 ntBASIC0.74□□□□□ -2.29
DKK3Q9UBP4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
DKK3Q9UBP4 RNA5SP347-201ENST00000362445 119 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 Y_RNA.207-201ENST00000364142 106 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 SNORD115-27-201ENST00000364430 82 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 Y_RNA.239-201ENST00000364444 113 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 MIR1197-201ENST00000408818 88 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 MIR4711-201ENST00000578274 70 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 AC062037.1-201ENST00000605302 128 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 MIR548BB-201ENST00000626714 66 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 RNU4-32P-201ENST00000363404 141 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 Y_RNA.491-201ENST00000384417 107 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 MIR140-201ENST00000385282 100 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 RNU6-287P-201ENST00000516230 98 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 RN7SKP12-201ENST00000516275 143 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 MIRLET7F1-201ENST00000362202 87 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 1054.5 ms