Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNU6-972P-201ENST00000391208 107 ntBASIC0.48□□□□□ -2.33
SMARCAL1Q9NZC9 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-1265P-201ENST00000516342 103 ntBASIC0.48□□□□□ -2.33
SMARCAL1Q9NZC9 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
SMARCAL1Q9NZC9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.48□□□□□ -2.33
SMARCAL1Q9NZC9 AC243829.3-201ENST00000622177 108 ntBASIC0.48□□□□□ -2.33
SMARCAL1Q9NZC9 U6.100-201ENST00000636230 99 ntBASIC0.48□□□□□ -2.33
SMARCAL1Q9NZC9 AC010487.4-201ENST00000637027 61 ntBASIC0.48□□□□□ -2.33
SMARCAL1Q9NZC9 Y_RNA.283-201ENST00000364798 112 ntBASIC0.47□□□□□ -2.33
SMARCAL1Q9NZC9 Y_RNA.348-201ENST00000365403 103 ntBASIC0.47□□□□□ -2.33
SMARCAL1Q9NZC9 MIR518A1-201ENST00000385068 85 ntBASIC0.47□□□□□ -2.33
SMARCAL1Q9NZC9 RNU6-466P-201ENST00000391224 103 ntBASIC0.47□□□□□ -2.33
SMARCAL1Q9NZC9 Y_RNA.648-201ENST00000459455 110 ntBASIC0.47□□□□□ -2.33
SMARCAL1Q9NZC9 RNU7-13P-201ENST00000516413 62 ntBASIC0.47□□□□□ -2.33
SMARCAL1Q9NZC9 MIR3920-201ENST00000581751 86 ntBASIC0.47□□□□□ -2.33
SMARCAL1Q9NZC9 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
SMARCAL1Q9NZC9 AC069271.1-201ENST00000445577 156 ntBASIC0.46□□□□□ -2.34
SMARCAL1Q9NZC9 RNU7-85P-201ENST00000458851 63 ntBASIC0.46□□□□□ -2.34
SMARCAL1Q9NZC9 SNORA40.13-201ENST00000516379 120 ntBASIC0.46□□□□□ -2.34
SMARCAL1Q9NZC9 Y_RNA.190-201ENST00000363964 101 ntBASIC0.45□□□□□ -2.34
SMARCAL1Q9NZC9 Y_RNA.290-201ENST00000364879 114 ntBASIC0.45□□□□□ -2.34
SMARCAL1Q9NZC9 RNU6-905P-201ENST00000384434 107 ntBASIC0.45□□□□□ -2.34
SMARCAL1Q9NZC9 RNA5SP89-201ENST00000410300 108 ntBASIC0.45□□□□□ -2.34
SMARCAL1Q9NZC9 SNORD71-201ENST00000411292 86 ntBASIC0.45□□□□□ -2.34
SMARCAL1Q9NZC9 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
SMARCAL1Q9NZC9 RNU6-158P-201ENST00000517104 100 ntBASIC0.45□□□□□ -2.34
SMARCAL1Q9NZC9 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
SMARCAL1Q9NZC9 Y_RNA.96-201ENST00000363092 109 ntBASIC0.44□□□□□ -2.34
SMARCAL1Q9NZC9 RNU6-640P-201ENST00000363693 105 ntBASIC0.44□□□□□ -2.34
SMARCAL1Q9NZC9 SNORD41.1-201ENST00000391000 69 ntBASIC0.44□□□□□ -2.34
SMARCAL1Q9NZC9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
SMARCAL1Q9NZC9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.44□□□□□ -2.34
SMARCAL1Q9NZC9 RNU6-75P-201ENST00000515944 104 ntBASIC0.44□□□□□ -2.34
SMARCAL1Q9NZC9 RNU6-168P-201ENST00000516189 101 ntBASIC0.44□□□□□ -2.34
SMARCAL1Q9NZC9 RN7SKP12-201ENST00000516275 143 ntBASIC0.44□□□□□ -2.34
SMARCAL1Q9NZC9 Y_RNA.677-201ENST00000516401 85 ntBASIC0.44□□□□□ -2.34
SMARCAL1Q9NZC9 MIR4752-201ENST00000579672 72 ntBASIC0.44□□□□□ -2.34
SMARCAL1Q9NZC9 MIR2052-201ENST00000636055 55 ntBASIC0.44□□□□□ -2.34
SMARCAL1Q9NZC9 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
SMARCAL1Q9NZC9 RNU6-269P-201ENST00000391077 97 ntBASIC0.43□□□□□ -2.34
SMARCAL1Q9NZC9 Y_RNA.596-201ENST00000410462 109 ntBASIC0.43□□□□□ -2.34
SMARCAL1Q9NZC9 MIR548AG2-201ENST00000581228 64 ntBASIC0.43□□□□□ -2.34
SMARCAL1Q9NZC9 MIR4536-1-201ENST00000583537 88 ntBASIC0.43□□□□□ -2.34
SMARCAL1Q9NZC9 MIR924-201ENST00000638017 53 ntBASIC0.43□□□□□ -2.34
SMARCAL1Q9NZC9 RNU6-287P-201ENST00000516230 98 ntBASIC0.42□□□□□ -2.34
SMARCAL1Q9NZC9 RNU6-65P-201ENST00000516332 98 ntBASIC0.42□□□□□ -2.34
SMARCAL1Q9NZC9 AL162376.1-201ENST00000624117 175 ntBASIC0.42□□□□□ -2.34
SMARCAL1Q9NZC9 MIR103A1-201ENST00000362165 78 ntBASIC0.41□□□□□ -2.34
SMARCAL1Q9NZC9 SNORD44.1-201ENST00000363202 61 ntBASIC0.41□□□□□ -2.34
SMARCAL1Q9NZC9 SNORD116-10-201ENST00000363791 102 ntBASIC0.41□□□□□ -2.34
SMARCAL1Q9NZC9 RNU6-1126P-201ENST00000384002 107 ntBASIC0.41□□□□□ -2.34
SMARCAL1Q9NZC9 RNU6-519P-201ENST00000410590 108 ntBASIC0.41□□□□□ -2.34
SMARCAL1Q9NZC9 SNORD4B-201ENST00000459083 72 ntBASIC0.41□□□□□ -2.34
SMARCAL1Q9NZC9 AC026421.1-201ENST00000519101 163 ntBASIC0.41□□□□□ -2.34
SMARCAL1Q9NZC9 MIR4696-201ENST00000581431 70 ntBASIC0.41□□□□□ -2.34
SMARCAL1Q9NZC9 MIRLET7F1-201ENST00000362202 87 ntBASIC0.4□□□□□ -2.35
SMARCAL1Q9NZC9 Y_RNA.207-201ENST00000364142 106 ntBASIC0.4□□□□□ -2.35
SMARCAL1Q9NZC9 MIR488-201ENST00000365739 83 ntBASIC0.4□□□□□ -2.35
SMARCAL1Q9NZC9 SNORD101-201ENST00000384027 73 ntBASIC0.4□□□□□ -2.35
SMARCAL1Q9NZC9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.4□□□□□ -2.35
SMARCAL1Q9NZC9 Y_RNA.609-201ENST00000410669 89 ntBASIC0.4□□□□□ -2.35
SMARCAL1Q9NZC9 MIR2113-201ENST00000459007 91 ntBASIC0.4□□□□□ -2.35
SMARCAL1Q9NZC9 MTRNR2L2-201ENST00000604882 87 ntBASIC0.4□□□□□ -2.35
SMARCAL1Q9NZC9 AC243829.6-201ENST00000612652 106 ntBASIC0.4□□□□□ -2.35
SMARCAL1Q9NZC9 MALAT1.1-201ENST00000618249 95 ntBASIC0.4□□□□□ -2.35
SMARCAL1Q9NZC9 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
SMARCAL1Q9NZC9 RNU6-664P-201ENST00000362381 107 ntBASIC0.39□□□□□ -2.35
SMARCAL1Q9NZC9 SNORD115-44-201ENST00000365391 82 ntBASIC0.39□□□□□ -2.35
SMARCAL1Q9NZC9 RNU6-132P-201ENST00000383863 107 ntBASIC0.39□□□□□ -2.35
SMARCAL1Q9NZC9 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
SMARCAL1Q9NZC9 RNU2-59P-201ENST00000410482 191 ntBASIC0.39□□□□□ -2.35
SMARCAL1Q9NZC9 MIR519E-201ENST00000385075 84 ntBASIC0.38□□□□□ -2.35
SMARCAL1Q9NZC9 RNU1-29P-201ENST00000606574 126 ntBASIC0.38□□□□□ -2.35
SMARCAL1Q9NZC9 SNORA70.25-201ENST00000612741 95 ntBASIC0.38□□□□□ -2.35
SMARCAL1Q9NZC9 MIR8087-201ENST00000612745 78 ntBASIC0.38□□□□□ -2.35
SMARCAL1Q9NZC9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.38□□□□□ -2.35
SMARCAL1Q9NZC9 MIR6755-201ENST00000619993 66 ntBASIC0.38□□□□□ -2.35
SMARCAL1Q9NZC9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.38□□□□□ -2.35
SMARCAL1Q9NZC9 RNA5SP457-201ENST00000363657 124 ntBASIC0.37□□□□□ -2.35
SMARCAL1Q9NZC9 RNY1P7-201ENST00000384743 110 ntBASIC0.37□□□□□ -2.35
SMARCAL1Q9NZC9 MIR617-201ENST00000385030 97 ntBASIC0.37□□□□□ -2.35
SMARCAL1Q9NZC9 RNA5SP484-201ENST00000458857 111 ntBASIC0.37□□□□□ -2.35
SMARCAL1Q9NZC9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.37□□□□□ -2.35
SMARCAL1Q9NZC9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.36□□□□□ -2.35
SMARCAL1Q9NZC9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
SMARCAL1Q9NZC9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
SMARCAL1Q9NZC9 MIR330-201ENST00000362196 94 ntBASIC0.35□□□□□ -2.35
SMARCAL1Q9NZC9 RNU4-32P-201ENST00000363404 141 ntBASIC0.35□□□□□ -2.35
SMARCAL1Q9NZC9 Y_RNA.239-201ENST00000364444 113 ntBASIC0.35□□□□□ -2.35
SMARCAL1Q9NZC9 RNY4P30-201ENST00000410216 95 ntBASIC0.35□□□□□ -2.35
SMARCAL1Q9NZC9 RNU7-74P-201ENST00000459104 62 ntBASIC0.35□□□□□ -2.35
SMARCAL1Q9NZC9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.35□□□□□ -2.35
SMARCAL1Q9NZC9 RNA5SP330-201ENST00000517096 96 ntBASIC0.35□□□□□ -2.35
SMARCAL1Q9NZC9 NAMPTP3-201ENST00000569273 224 ntBASIC0.35□□□□□ -2.35
SMARCAL1Q9NZC9 RNU6-509P-201ENST00000363519 107 ntBASIC0.34□□□□□ -2.36
SMARCAL1Q9NZC9 RNU6-1131P-201ENST00000364955 107 ntBASIC0.34□□□□□ -2.36
SMARCAL1Q9NZC9 RNA5SP292-201ENST00000390974 118 ntBASIC0.34□□□□□ -2.36
SMARCAL1Q9NZC9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SMARCAL1Q9NZC9 MIR3064-201ENST00000581130 66 ntBASIC0.34□□□□□ -2.36
SMARCAL1Q9NZC9 RNU1-141P-201ENST00000364623 158 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 236.6 ms