Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 MIR518A1-201ENST00000385068 85 ntBASIC0.45□□□□□ -2.34
KLHL1Q9NR64 snoU13.11-201ENST00000459219 104 ntBASIC0.45□□□□□ -2.34
KLHL1Q9NR64 Y_RNA.648-201ENST00000459455 110 ntBASIC0.45□□□□□ -2.34
KLHL1Q9NR64 MIR2052-201ENST00000636055 55 ntBASIC0.45□□□□□ -2.34
KLHL1Q9NR64 RNU6-1265P-201ENST00000516342 103 ntBASIC0.44□□□□□ -2.34
KLHL1Q9NR64 SNORA40.13-201ENST00000516379 120 ntBASIC0.44□□□□□ -2.34
KLHL1Q9NR64 SNORD118-201ENST00000363593 134 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 RNU6-726P-201ENST00000364680 107 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 Y_RNA.283-201ENST00000364798 112 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 MTATP8P2-201ENST00000435212 202 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
KLHL1Q9NR64 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.43□□□□□ -2.34
KLHL1Q9NR64 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 RNU6-162P-201ENST00000516228 103 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 RNU6-65P-201ENST00000516332 98 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 MIR1273G-201ENST00000577677 100 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 AP001318.4-201ENST00000616637 121 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 AC010487.4-201ENST00000637027 61 ntBASIC0.43□□□□□ -2.34
KLHL1Q9NR64 SNORD115-44-201ENST00000365391 82 ntBASIC0.42□□□□□ -2.34
KLHL1Q9NR64 RNU6-158P-201ENST00000517104 100 ntBASIC0.42□□□□□ -2.34
KLHL1Q9NR64 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
KLHL1Q9NR64 U7.3-201ENST00000616123 62 ntBASIC0.42□□□□□ -2.34
KLHL1Q9NR64 U6.100-201ENST00000636230 99 ntBASIC0.42□□□□□ -2.34
KLHL1Q9NR64 SNORD116-10-201ENST00000363791 102 ntBASIC0.41□□□□□ -2.34
KLHL1Q9NR64 RNU6-153P-201ENST00000364422 104 ntBASIC0.41□□□□□ -2.34
KLHL1Q9NR64 SNORD58A-201ENST00000383875 65 ntBASIC0.41□□□□□ -2.34
KLHL1Q9NR64 Y_RNA.596-201ENST00000410462 109 ntBASIC0.41□□□□□ -2.34
KLHL1Q9NR64 RNU6-519P-201ENST00000410590 108 ntBASIC0.41□□□□□ -2.34
KLHL1Q9NR64 MIR3920-201ENST00000581751 86 ntBASIC0.41□□□□□ -2.34
KLHL1Q9NR64 MIR4536-1-201ENST00000583537 88 ntBASIC0.41□□□□□ -2.34
KLHL1Q9NR64 SNORD41.1-201ENST00000391000 69 ntBASIC0.4□□□□□ -2.35
KLHL1Q9NR64 AC069271.1-201ENST00000445577 156 ntBASIC0.4□□□□□ -2.35
KLHL1Q9NR64 RNU7-74P-201ENST00000459104 62 ntBASIC0.4□□□□□ -2.35
KLHL1Q9NR64 Y_RNA.677-201ENST00000516401 85 ntBASIC0.4□□□□□ -2.35
KLHL1Q9NR64 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
KLHL1Q9NR64 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
KLHL1Q9NR64 RNU6-1126P-201ENST00000384002 107 ntBASIC0.39□□□□□ -2.35
KLHL1Q9NR64 SNORD101-201ENST00000384027 73 ntBASIC0.39□□□□□ -2.35
KLHL1Q9NR64 RNU2-59P-201ENST00000410482 191 ntBASIC0.39□□□□□ -2.35
KLHL1Q9NR64 RNU6-168P-201ENST00000516189 101 ntBASIC0.38□□□□□ -2.35
KLHL1Q9NR64 RNU6-1057P-201ENST00000517162 102 ntBASIC0.38□□□□□ -2.35
KLHL1Q9NR64 AL162376.1-201ENST00000624117 175 ntBASIC0.38□□□□□ -2.35
KLHL1Q9NR64 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.38□□□□□ -2.35
KLHL1Q9NR64 Y_RNA.348-201ENST00000365403 103 ntBASIC0.37□□□□□ -2.35
KLHL1Q9NR64 Y_RNA.423-201ENST00000384057 113 ntBASIC0.37□□□□□ -2.35
KLHL1Q9NR64 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
KLHL1Q9NR64 RNU6-269P-201ENST00000391077 97 ntBASIC0.37□□□□□ -2.35
KLHL1Q9NR64 RNU7-85P-201ENST00000458851 63 ntBASIC0.37□□□□□ -2.35
KLHL1Q9NR64 MIR2113-201ENST00000459007 91 ntBASIC0.37□□□□□ -2.35
KLHL1Q9NR64 RNU6-287P-201ENST00000516230 98 ntBASIC0.37□□□□□ -2.35
KLHL1Q9NR64 MIR4752-201ENST00000579672 72 ntBASIC0.37□□□□□ -2.35
KLHL1Q9NR64 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.37□□□□□ -2.35
KLHL1Q9NR64 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.36□□□□□ -2.35
KLHL1Q9NR64 RNU6-509P-201ENST00000363519 107 ntBASIC0.36□□□□□ -2.35
KLHL1Q9NR64 Y_RNA.239-201ENST00000364444 113 ntBASIC0.36□□□□□ -2.35
KLHL1Q9NR64 Y_RNA.290-201ENST00000364879 114 ntBASIC0.36□□□□□ -2.35
KLHL1Q9NR64 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
KLHL1Q9NR64 RNA5SP89-201ENST00000410300 108 ntBASIC0.36□□□□□ -2.35
KLHL1Q9NR64 AC073869.9-201ENST00000641610 120 ntBASIC0.36□□□□□ -2.35
KLHL1Q9NR64 RNU6-664P-201ENST00000362381 107 ntBASIC0.35□□□□□ -2.35
KLHL1Q9NR64 SNORD44.1-201ENST00000363202 61 ntBASIC0.35□□□□□ -2.35
KLHL1Q9NR64 Y_RNA.207-201ENST00000364142 106 ntBASIC0.35□□□□□ -2.35
KLHL1Q9NR64 MIR617-201ENST00000385030 97 ntBASIC0.35□□□□□ -2.35
KLHL1Q9NR64 Y_RNA.609-201ENST00000410669 89 ntBASIC0.35□□□□□ -2.35
KLHL1Q9NR64 SNORD4B-201ENST00000459083 72 ntBASIC0.35□□□□□ -2.35
KLHL1Q9NR64 RNU6-75P-201ENST00000515944 104 ntBASIC0.35□□□□□ -2.35
KLHL1Q9NR64 RNU6-863P-201ENST00000515989 104 ntBASIC0.35□□□□□ -2.35
KLHL1Q9NR64 MIR4696-201ENST00000581431 70 ntBASIC0.35□□□□□ -2.35
KLHL1Q9NR64 MALAT1.1-201ENST00000618249 95 ntBASIC0.35□□□□□ -2.35
KLHL1Q9NR64 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
KLHL1Q9NR64 MIRLET7F1-201ENST00000362202 87 ntBASIC0.34□□□□□ -2.36
KLHL1Q9NR64 RNU6-640P-201ENST00000363693 105 ntBASIC0.34□□□□□ -2.36
KLHL1Q9NR64 Y_RNA.190-201ENST00000363964 101 ntBASIC0.34□□□□□ -2.36
KLHL1Q9NR64 MIR548U-201ENST00000390728 81 ntBASIC0.34□□□□□ -2.36
KLHL1Q9NR64 MIR548AG2-201ENST00000581228 64 ntBASIC0.34□□□□□ -2.36
KLHL1Q9NR64 MTRNR2L2-201ENST00000604882 87 ntBASIC0.34□□□□□ -2.36
KLHL1Q9NR64 MIR924-201ENST00000638017 53 ntBASIC0.34□□□□□ -2.36
KLHL1Q9NR64 SNORA2A-201ENST00000383885 135 ntBASIC0.33□□□□□ -2.36
KLHL1Q9NR64 RNU6-905P-201ENST00000384434 107 ntBASIC0.33□□□□□ -2.36
KLHL1Q9NR64 MIR519E-201ENST00000385075 84 ntBASIC0.33□□□□□ -2.36
KLHL1Q9NR64 RNU6-935P-201ENST00000410371 100 ntBASIC0.33□□□□□ -2.36
KLHL1Q9NR64 RNU7-129P-201ENST00000516128 62 ntBASIC0.33□□□□□ -2.36
KLHL1Q9NR64 NAMPTP3-201ENST00000569273 224 ntBASIC0.33□□□□□ -2.36
KLHL1Q9NR64 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.33□□□□□ -2.36
KLHL1Q9NR64 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
KLHL1Q9NR64 RNU4-32P-201ENST00000363404 141 ntBASIC0.32□□□□□ -2.36
KLHL1Q9NR64 Y_RNA.220-201ENST00000364244 109 ntBASIC0.32□□□□□ -2.36
KLHL1Q9NR64 RNU6-811P-201ENST00000384069 107 ntBASIC0.32□□□□□ -2.36
KLHL1Q9NR64 AC006210.1-201ENST00000424882 111 ntBASIC0.32□□□□□ -2.36
KLHL1Q9NR64 AC073261.1-201ENST00000429409 121 ntBASIC0.32□□□□□ -2.36
KLHL1Q9NR64 RNA5SP484-201ENST00000458857 111 ntBASIC0.32□□□□□ -2.36
KLHL1Q9NR64 AC026421.1-201ENST00000519101 163 ntBASIC0.32□□□□□ -2.36
KLHL1Q9NR64 RNA5SP62-201ENST00000363457 110 ntBASIC0.31□□□□□ -2.36
KLHL1Q9NR64 MIR760-201ENST00000390220 80 ntBASIC0.31□□□□□ -2.36
KLHL1Q9NR64 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
KLHL1Q9NR64 RNA5SP330-201ENST00000517096 96 ntBASIC0.31□□□□□ -2.36
KLHL1Q9NR64 SNORA70.25-201ENST00000612741 95 ntBASIC0.31□□□□□ -2.36
KLHL1Q9NR64 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 1156.5 ms