Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR4771-2-201ENST00000577758 74 ntBASIC2.05□□□□□ -2.08
COL25A1Q9BXS0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
COL25A1Q9BXS0 MIR5694-201ENST00000581190 76 ntBASIC2.05□□□□□ -2.08
COL25A1Q9BXS0 MIR4771-1-201ENST00000582617 74 ntBASIC2.05□□□□□ -2.08
COL25A1Q9BXS0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
COL25A1Q9BXS0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
COL25A1Q9BXS0 RNU6-1312P-201ENST00000362425 108 ntBASIC2.04□□□□□ -2.08
COL25A1Q9BXS0 RNU6-1223P-201ENST00000517124 104 ntBASIC2.04□□□□□ -2.08
COL25A1Q9BXS0 SNORA40.17-201ENST00000517256 115 ntBASIC2.04□□□□□ -2.08
COL25A1Q9BXS0 SNORD113.3-201ENST00000364630 78 ntBASIC2.03□□□□□ -2.08
COL25A1Q9BXS0 RNU6-302P-201ENST00000365249 107 ntBASIC2.03□□□□□ -2.08
COL25A1Q9BXS0 RNU6-54P-201ENST00000365563 107 ntBASIC2.03□□□□□ -2.08
COL25A1Q9BXS0 Y_RNA.379-201ENST00000365653 102 ntBASIC2.03□□□□□ -2.08
COL25A1Q9BXS0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
COL25A1Q9BXS0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL25A1Q9BXS0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
COL25A1Q9BXS0 MIR21-201ENST00000362134 72 ntBASIC2.02□□□□□ -2.09
COL25A1Q9BXS0 SNORA2.1-201ENST00000363089 137 ntBASIC2.02□□□□□ -2.09
COL25A1Q9BXS0 RNA5SP403-201ENST00000363598 108 ntBASIC2.02□□□□□ -2.09
COL25A1Q9BXS0 SNORA3A-201ENST00000364113 130 ntBASIC2.02□□□□□ -2.09
COL25A1Q9BXS0 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
COL25A1Q9BXS0 RNU7-193P-201ENST00000516723 65 ntBASIC2.02□□□□□ -2.09
COL25A1Q9BXS0 MIR6739-201ENST00000622461 75 ntBASIC2.02□□□□□ -2.09
COL25A1Q9BXS0 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
COL25A1Q9BXS0 MIR96-201ENST00000362288 78 ntBASIC2.01□□□□□ -2.09
COL25A1Q9BXS0 MIR617-201ENST00000385030 97 ntBASIC2.01□□□□□ -2.09
COL25A1Q9BXS0 SNORD42B-201ENST00000458893 67 ntBASIC2.01□□□□□ -2.09
COL25A1Q9BXS0 AC036111.3-201ENST00000526389 112 ntBASIC2.01□□□□□ -2.09
COL25A1Q9BXS0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
COL25A1Q9BXS0 MIR4676-201ENST00000583078 72 ntBASIC2□□□□□ -2.09
COL25A1Q9BXS0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL25A1Q9BXS0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
COL25A1Q9BXS0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL25A1Q9BXS0 RPS26P5-201ENST00000418544 335 ntBASIC1.99□□□□□ -2.09
COL25A1Q9BXS0 AC067940.1-201ENST00000458411 300 ntBASIC1.99□□□□□ -2.09
COL25A1Q9BXS0 MIR3664-201ENST00000579074 99 ntBASIC1.99□□□□□ -2.09
COL25A1Q9BXS0 MIR548V-201ENST00000584165 80 ntBASIC1.99□□□□□ -2.09
COL25A1Q9BXS0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.99□□□□□ -2.09
COL25A1Q9BXS0 RNU6-364P-201ENST00000384387 107 ntBASIC1.98□□□□□ -2.09
COL25A1Q9BXS0 MIR519E-201ENST00000385075 84 ntBASIC1.98□□□□□ -2.09
COL25A1Q9BXS0 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
COL25A1Q9BXS0 RNA5SP212-201ENST00000391223 107 ntBASIC1.98□□□□□ -2.09
COL25A1Q9BXS0 SNORD23.1-201ENST00000408212 104 ntBASIC1.98□□□□□ -2.09
COL25A1Q9BXS0 RNU7-161P-201ENST00000517289 62 ntBASIC1.98□□□□□ -2.09
COL25A1Q9BXS0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL25A1Q9BXS0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL25A1Q9BXS0 SNORD115-24-201ENST00000363528 82 ntBASIC1.97□□□□□ -2.09
COL25A1Q9BXS0 RNU6-753P-201ENST00000363926 107 ntBASIC1.97□□□□□ -2.09
COL25A1Q9BXS0 MIR938-201ENST00000401216 83 ntBASIC1.97□□□□□ -2.09
COL25A1Q9BXS0 RNU7-102P-201ENST00000458948 62 ntBASIC1.97□□□□□ -2.09
COL25A1Q9BXS0 AC055731.1-201ENST00000474387 401 ntBASIC1.97□□□□□ -2.09
COL25A1Q9BXS0 RNU7-40P-201ENST00000516397 64 ntBASIC1.97□□□□□ -2.09
COL25A1Q9BXS0 RNA5SP147-201ENST00000516493 109 ntBASIC1.97□□□□□ -2.09
COL25A1Q9BXS0 RN7SL793P-201ENST00000583259 296 ntBASIC1.97□□□□□ -2.09
COL25A1Q9BXS0 AC027335.2-201ENST00000624030 375 ntBASIC1.97□□□□□ -2.09
COL25A1Q9BXS0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
COL25A1Q9BXS0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.09
COL25A1Q9BXS0 SNORA7.1-201ENST00000363750 139 ntBASIC1.96□□□□□ -2.1
COL25A1Q9BXS0 RNU6-990P-201ENST00000364385 104 ntBASIC1.96□□□□□ -2.1
COL25A1Q9BXS0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
COL25A1Q9BXS0 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
COL25A1Q9BXS0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.96□□□□□ -2.1
COL25A1Q9BXS0 MIR548AD-201ENST00000584780 82 ntBASIC1.96□□□□□ -2.1
COL25A1Q9BXS0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL25A1Q9BXS0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.95□□□□□ -2.1
COL25A1Q9BXS0 RNU6V-201ENST00000384105 107 ntBASIC1.95□□□□□ -2.1
COL25A1Q9BXS0 RNU6-520P-201ENST00000384717 104 ntBASIC1.95□□□□□ -2.1
COL25A1Q9BXS0 MIR630-201ENST00000384957 97 ntBASIC1.95□□□□□ -2.1
COL25A1Q9BXS0 RPS29P1-201ENST00000465274 159 ntBASIC1.95□□□□□ -2.1
COL25A1Q9BXS0 RNU6-165P-201ENST00000517170 99 ntBASIC1.95□□□□□ -2.1
COL25A1Q9BXS0 uc_338.10-201ENST00000621872 182 ntBASIC1.95□□□□□ -2.1
COL25A1Q9BXS0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.95□□□□□ -2.1
COL25A1Q9BXS0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
COL25A1Q9BXS0 RNA5SP276-201ENST00000362580 94 ntBASIC1.94□□□□□ -2.1
COL25A1Q9BXS0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.94□□□□□ -2.1
COL25A1Q9BXS0 MIR520E-201ENST00000384867 87 ntBASIC1.94□□□□□ -2.1
COL25A1Q9BXS0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.94□□□□□ -2.1
COL25A1Q9BXS0 RNA5SP436-201ENST00000516020 115 ntBASIC1.94□□□□□ -2.1
COL25A1Q9BXS0 SNORA31.14-201ENST00000516728 116 ntBASIC1.94□□□□□ -2.1
COL25A1Q9BXS0 RNU6-902P-201ENST00000517212 91 ntBASIC1.94□□□□□ -2.1
COL25A1Q9BXS0 AL137847.3-201ENST00000611521 109 ntBASIC1.94□□□□□ -2.1
COL25A1Q9BXS0 MIR6840-201ENST00000611937 71 ntBASIC1.94□□□□□ -2.1
COL25A1Q9BXS0 uc_338.16-201ENST00000621804 95 ntBASIC1.94□□□□□ -2.1
COL25A1Q9BXS0 MIR302D-201ENST00000362275 68 ntBASIC1.93□□□□□ -2.1
COL25A1Q9BXS0 SNORD111-201ENST00000408139 94 ntBASIC1.93□□□□□ -2.1
COL25A1Q9BXS0 AL157398.1-201ENST00000452981 186 ntBASIC1.93□□□□□ -2.1
COL25A1Q9BXS0 MIR151B-201ENST00000584249 96 ntBASIC1.93□□□□□ -2.1
COL25A1Q9BXS0 AC106800.4-201ENST00000614905 153 ntBASIC1.93□□□□□ -2.1
COL25A1Q9BXS0 MIR8074-201ENST00000615081 81 ntBASIC1.93□□□□□ -2.1
COL25A1Q9BXS0 AL157834.3-201ENST00000615543 103 ntBASIC1.93□□□□□ -2.1
COL25A1Q9BXS0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL25A1Q9BXS0 MIRLET7G-201ENST00000362280 84 ntBASIC1.92□□□□□ -2.1
COL25A1Q9BXS0 RNU1-93P-201ENST00000364704 169 ntBASIC1.92□□□□□ -2.1
COL25A1Q9BXS0 AL356379.1-201ENST00000414105 126 ntBASIC1.92□□□□□ -2.1
COL25A1Q9BXS0 MIR4255-201ENST00000579351 72 ntBASIC1.92□□□□□ -2.1
COL25A1Q9BXS0 MIR4804-201ENST00000581683 73 ntBASIC1.92□□□□□ -2.1
COL25A1Q9BXS0 MIR502-201ENST00000606349 86 ntBASIC1.92□□□□□ -2.1
COL25A1Q9BXS0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.92□□□□□ -2.1
COL25A1Q9BXS0 MIR6788-201ENST00000618842 66 ntBASIC1.92□□□□□ -2.1
COL25A1Q9BXS0 RNA5SP457-201ENST00000363657 124 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms