Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 SNORA63.6-201ENST00000364921 119 ntBASIC-1.61□□□□□ -2.67
LIMD2Q9BT23 SNORD2.1-201ENST00000458762 69 ntBASIC-1.61□□□□□ -2.67
LIMD2Q9BT23 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.61□□□□□ -2.67
LIMD2Q9BT23 MTND3P22-201ENST00000510932 243 ntBASIC-1.61□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.61□□□□□ -2.67
LIMD2Q9BT23 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.61□□□□□ -2.67
LIMD2Q9BT23 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.61□□□□□ -2.67
LIMD2Q9BT23 MIR548AM-201ENST00000584298 74 ntBASIC-1.61□□□□□ -2.67
LIMD2Q9BT23 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.61□□□□□ -2.67
LIMD2Q9BT23 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
LIMD2Q9BT23 RNU6-194P-201ENST00000363862 105 ntBASIC-1.62□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.62□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.62□□□□□ -2.67
LIMD2Q9BT23 SNORD116-6-201ENST00000384711 96 ntBASIC-1.62□□□□□ -2.67
LIMD2Q9BT23 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.62□□□□□ -2.67
LIMD2Q9BT23 AC018880.2-201ENST00000414265 201 ntBASIC-1.62□□□□□ -2.67
LIMD2Q9BT23 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.62□□□□□ -2.67
LIMD2Q9BT23 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.62□□□□□ -2.67
LIMD2Q9BT23 MIR548AG1-201ENST00000579932 66 ntBASIC-1.62□□□□□ -2.67
LIMD2Q9BT23 MIR3123-201ENST00000583417 75 ntBASIC-1.62□□□□□ -2.67
LIMD2Q9BT23 RNU6-695P-201ENST00000391157 104 ntBASIC-1.63□□□□□ -2.67
LIMD2Q9BT23 MIR1277-201ENST00000408536 78 ntBASIC-1.63□□□□□ -2.67
LIMD2Q9BT23 RNU7-152P-201ENST00000458982 64 ntBASIC-1.63□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.63□□□□□ -2.67
LIMD2Q9BT23 RNU6-240P-201ENST00000516098 97 ntBASIC-1.63□□□□□ -2.67
LIMD2Q9BT23 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.63□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 RNU6-121P-201ENST00000410525 99 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 AL121914.1-201ENST00000450188 156 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 RNY4-201ENST00000516507 96 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 AC090574.1-201ENST00000623186 233 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 U6.96-201ENST00000636425 70 ntBASIC-1.64□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.65□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.65□□□□□ -2.67
LIMD2Q9BT23 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.65□□□□□ -2.67
LIMD2Q9BT23 SNORD116-29-201ENST00000384516 83 ntBASIC-1.65□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.65□□□□□ -2.67
LIMD2Q9BT23 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.65□□□□□ -2.67
LIMD2Q9BT23 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.65□□□□□ -2.67
LIMD2Q9BT23 AC084782.3-201ENST00000612282 578 ntBASIC-1.65□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 RNU6-563P-201ENST00000364872 108 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 MIR1255B2-201ENST00000408618 67 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 RNU7-88P-201ENST00000458752 63 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 FGF7P4-201ENST00000509595 295 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 AP002392.1-201ENST00000537692 208 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 MIR4744-201ENST00000581563 82 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.66□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.67□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.67□□□□□ -2.68
LIMD2Q9BT23 RNU6-841P-201ENST00000383872 107 ntBASIC-1.67□□□□□ -2.68
LIMD2Q9BT23 MTATP6P21-201ENST00000440681 189 ntBASIC-1.67□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.67□□□□□ -2.68
LIMD2Q9BT23 RNU6-521P-201ENST00000516663 105 ntBASIC-1.67□□□□□ -2.68
LIMD2Q9BT23 MIR4490-201ENST00000582647 84 ntBASIC-1.67□□□□□ -2.68
LIMD2Q9BT23 AL365265.1-201ENST00000621045 234 ntBASIC-1.67□□□□□ -2.68
LIMD2Q9BT23 MTND4LP32-201ENST00000636111 270 ntBASIC-1.67□□□□□ -2.68
LIMD2Q9BT23 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.68□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.68□□□□□ -2.68
LIMD2Q9BT23 SNORD115-31-201ENST00000365318 82 ntBASIC-1.68□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.68□□□□□ -2.68
LIMD2Q9BT23 SNORD116-1-201ENST00000384335 95 ntBASIC-1.68□□□□□ -2.68
LIMD2Q9BT23 MIR451A-201ENST00000385059 72 ntBASIC-1.68□□□□□ -2.68
LIMD2Q9BT23 RNU6-976P-201ENST00000516086 111 ntBASIC-1.68□□□□□ -2.68
LIMD2Q9BT23 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.68□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.69□□□□□ -2.68
LIMD2Q9BT23 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.69□□□□□ -2.68
LIMD2Q9BT23 ELOCP20-201ENST00000422460 345 ntBASIC-1.69□□□□□ -2.68
LIMD2Q9BT23 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.69□□□□□ -2.68
LIMD2Q9BT23 RNU6-719P-201ENST00000516671 104 ntBASIC-1.69□□□□□ -2.68
LIMD2Q9BT23 U7.5-201ENST00000517224 61 ntBASIC-1.69□□□□□ -2.68
LIMD2Q9BT23 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.69□□□□□ -2.68
LIMD2Q9BT23 SNORA33.1-201ENST00000364957 130 ntBASIC-1.7□□□□□ -2.68
LIMD2Q9BT23 RNU6-608P-201ENST00000383927 104 ntBASIC-1.7□□□□□ -2.68
LIMD2Q9BT23 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.7□□□□□ -2.68
LIMD2Q9BT23 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.7□□□□□ -2.68
LIMD2Q9BT23 RNU6-246P-201ENST00000384702 107 ntBASIC-1.7□□□□□ -2.68
LIMD2Q9BT23 AC069439.1-201ENST00000494739 167 ntBASIC-1.7□□□□□ -2.68
LIMD2Q9BT23 MIR4282-201ENST00000583613 67 ntBASIC-1.7□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms