Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MIR499A-201ENST00000384903 122 ntBASIC1.17□□□□□ -2.22
PTCHD1Q96NR3 RNU6-935P-201ENST00000410371 100 ntBASIC1.17□□□□□ -2.22
PTCHD1Q96NR3 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.17□□□□□ -2.22
PTCHD1Q96NR3 RNU6-161P-201ENST00000363051 106 ntBASIC1.16□□□□□ -2.22
PTCHD1Q96NR3 MIR1287-201ENST00000408492 90 ntBASIC1.16□□□□□ -2.22
PTCHD1Q96NR3 RNU7-104P-201ENST00000459398 79 ntBASIC1.16□□□□□ -2.22
PTCHD1Q96NR3 Y_RNA.660-201ENST00000516002 120 ntBASIC1.16□□□□□ -2.22
PTCHD1Q96NR3 RNU6-1108P-201ENST00000516308 104 ntBASIC1.16□□□□□ -2.22
PTCHD1Q96NR3 MIR3612-201ENST00000579753 87 ntBASIC1.16□□□□□ -2.22
PTCHD1Q96NR3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.15□□□□□ -2.23
PTCHD1Q96NR3 RNU6-686P-201ENST00000364839 107 ntBASIC1.15□□□□□ -2.23
PTCHD1Q96NR3 RNY4P3-201ENST00000365254 95 ntBASIC1.15□□□□□ -2.23
PTCHD1Q96NR3 RNU6-287P-201ENST00000516230 98 ntBASIC1.15□□□□□ -2.23
PTCHD1Q96NR3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
PTCHD1Q96NR3 SNORD77.2-201ENST00000391045 68 ntBASIC1.14□□□□□ -2.23
PTCHD1Q96NR3 RNU6-1057P-201ENST00000517162 102 ntBASIC1.14□□□□□ -2.23
PTCHD1Q96NR3 MIR4639-201ENST00000584938 69 ntBASIC1.14□□□□□ -2.23
PTCHD1Q96NR3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.14□□□□□ -2.23
PTCHD1Q96NR3 MIR8070-201ENST00000616510 88 ntBASIC1.14□□□□□ -2.23
PTCHD1Q96NR3 MIRLET7A1-201ENST00000362295 80 ntBASIC1.13□□□□□ -2.23
PTCHD1Q96NR3 RNU5F-1-201ENST00000362507 117 ntBASIC1.13□□□□□ -2.23
PTCHD1Q96NR3 MIR451A-201ENST00000385059 72 ntBASIC1.13□□□□□ -2.23
PTCHD1Q96NR3 MIR3920-201ENST00000581751 86 ntBASIC1.13□□□□□ -2.23
PTCHD1Q96NR3 AC067863.3-201ENST00000624172 122 ntBASIC1.13□□□□□ -2.23
PTCHD1Q96NR3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 RNU6-1094P-201ENST00000362416 104 ntBASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 RNU6-208P-201ENST00000362431 107 ntBASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 RNU6-1229P-201ENST00000364295 107 ntBASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 Y_RNA.264-201ENST00000364665 102 ntBASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 SNORD28-201ENST00000384706 75 ntBASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 SNORD99-201ENST00000408612 74 ntBASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 MIR2113-201ENST00000459007 91 ntBASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 MIR3678-201ENST00000578455 94 ntBASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 MIR3140-201ENST00000583685 90 ntBASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 AC244669.1-204ENST00000621564 178 ntBASIC1.12□□□□□ -2.23
PTCHD1Q96NR3 SNORD18A-201ENST00000363753 72 ntBASIC1.11□□□□□ -2.23
PTCHD1Q96NR3 RNU6-1126P-201ENST00000384002 107 ntBASIC1.11□□□□□ -2.23
PTCHD1Q96NR3 RNU6-380P-201ENST00000410207 107 ntBASIC1.11□□□□□ -2.23
PTCHD1Q96NR3 snoU13.17-201ENST00000458802 104 ntBASIC1.1□□□□□ -2.23
PTCHD1Q96NR3 AC011195.1-201ENST00000578177 177 ntBASIC1.1□□□□□ -2.23
PTCHD1Q96NR3 MIR548AG2-201ENST00000581228 64 ntBASIC1.1□□□□□ -2.23
PTCHD1Q96NR3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.1□□□□□ -2.23
PTCHD1Q96NR3 RNU6-1052P-201ENST00000411398 104 ntBASIC1.09□□□□□ -2.23
PTCHD1Q96NR3 AC244098.3-201ENST00000424803 96 ntBASIC1.09□□□□□ -2.23
PTCHD1Q96NR3 RNU6-719P-201ENST00000516671 104 ntBASIC1.09□□□□□ -2.23
PTCHD1Q96NR3 RNA5SP47-201ENST00000517230 109 ntBASIC1.08□□□□□ -2.24
PTCHD1Q96NR3 MIR4661-201ENST00000582720 75 ntBASIC1.08□□□□□ -2.24
PTCHD1Q96NR3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.08□□□□□ -2.24
PTCHD1Q96NR3 MIR6504-201ENST00000613520 61 ntBASIC1.08□□□□□ -2.24
PTCHD1Q96NR3 MIR617-201ENST00000385030 97 ntBASIC1.07□□□□□ -2.24
PTCHD1Q96NR3 U3.27-201ENST00000391237 200 ntBASIC1.07□□□□□ -2.24
PTCHD1Q96NR3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.07□□□□□ -2.24
PTCHD1Q96NR3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.07□□□□□ -2.24
PTCHD1Q96NR3 MIR4662A-201ENST00000637499 67 ntBASIC1.07□□□□□ -2.24
PTCHD1Q96NR3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
PTCHD1Q96NR3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PTCHD1Q96NR3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
PTCHD1Q96NR3 MIR18A-201ENST00000362310 71 ntBASIC1.06□□□□□ -2.24
PTCHD1Q96NR3 MIR548L-201ENST00000408303 86 ntBASIC1.06□□□□□ -2.24
PTCHD1Q96NR3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
PTCHD1Q96NR3 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
PTCHD1Q96NR3 Y_RNA.12-201ENST00000362393 112 ntBASIC1.05□□□□□ -2.24
PTCHD1Q96NR3 SNORA24B-201ENST00000384176 131 ntBASIC1.05□□□□□ -2.24
PTCHD1Q96NR3 SNORD41.1-201ENST00000391000 69 ntBASIC1.05□□□□□ -2.24
PTCHD1Q96NR3 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
PTCHD1Q96NR3 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
PTCHD1Q96NR3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.05□□□□□ -2.24
PTCHD1Q96NR3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.05□□□□□ -2.24
PTCHD1Q96NR3 YWHAEP2-201ENST00000580066 112 ntBASIC1.05□□□□□ -2.24
PTCHD1Q96NR3 YWHAEP3-201ENST00000582767 121 ntBASIC1.05□□□□□ -2.24
PTCHD1Q96NR3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.05□□□□□ -2.24
PTCHD1Q96NR3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PTCHD1Q96NR3 RNU4-45P-201ENST00000365469 141 ntBASIC1.04□□□□□ -2.24
PTCHD1Q96NR3 MIR519E-201ENST00000385075 84 ntBASIC1.04□□□□□ -2.24
PTCHD1Q96NR3 MIR1285-1-201ENST00000408593 84 ntBASIC1.04□□□□□ -2.24
PTCHD1Q96NR3 MIR1276-201ENST00000408707 83 ntBASIC1.04□□□□□ -2.24
PTCHD1Q96NR3 RNU7-74P-201ENST00000459104 62 ntBASIC1.04□□□□□ -2.24
PTCHD1Q96NR3 AL353765.1-201ENST00000605514 183 ntBASIC1.04□□□□□ -2.24
PTCHD1Q96NR3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PTCHD1Q96NR3 RNU6-776P-201ENST00000364403 104 ntBASIC1.03□□□□□ -2.24
PTCHD1Q96NR3 RNU6-726P-201ENST00000364680 107 ntBASIC1.03□□□□□ -2.24
PTCHD1Q96NR3 RNU6-1022P-201ENST00000365049 104 ntBASIC1.03□□□□□ -2.24
PTCHD1Q96NR3 RNU6-716P-201ENST00000365621 103 ntBASIC1.03□□□□□ -2.24
PTCHD1Q96NR3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
PTCHD1Q96NR3 AC097510.1-201ENST00000510945 133 ntBASIC1.03□□□□□ -2.24
PTCHD1Q96NR3 RNU6-303P-201ENST00000517091 106 ntBASIC1.03□□□□□ -2.24
PTCHD1Q96NR3 AC145423.2-201ENST00000610631 239 ntBASIC1.03□□□□□ -2.24
PTCHD1Q96NR3 U7.4-201ENST00000614961 63 ntBASIC1.03□□□□□ -2.24
PTCHD1Q96NR3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.02□□□□□ -2.25
PTCHD1Q96NR3 Y_RNA.532-201ENST00000384590 113 ntBASIC1.02□□□□□ -2.25
PTCHD1Q96NR3 MIR216B-201ENST00000390186 82 ntBASIC1.02□□□□□ -2.25
PTCHD1Q96NR3 RNA5SP222-201ENST00000411039 105 ntBASIC1.02□□□□□ -2.25
PTCHD1Q96NR3 RNU6-807P-201ENST00000516805 107 ntBASIC1.02□□□□□ -2.25
PTCHD1Q96NR3 RNA5SP102-201ENST00000516865 106 ntBASIC1.02□□□□□ -2.25
PTCHD1Q96NR3 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.02□□□□□ -2.25
PTCHD1Q96NR3 MIR1297-201ENST00000637311 77 ntBASIC1.02□□□□□ -2.25
PTCHD1Q96NR3 Y_RNA.371-201ENST00000365591 113 ntBASIC1.01□□□□□ -2.25
PTCHD1Q96NR3 RNU6-1296P-201ENST00000383879 107 ntBASIC1.01□□□□□ -2.25
PTCHD1Q96NR3 MIR889-201ENST00000401280 79 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 246.7 ms