Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SNORA40.13-201ENST00000516379 120 ntBASIC0.56□□□□□ -2.32
VPS50Q96JG6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
VPS50Q96JG6 PVT1_3.1-201ENST00000620853 95 ntBASIC0.56□□□□□ -2.32
VPS50Q96JG6 SNORD41.1-201ENST00000391000 69 ntBASIC0.55□□□□□ -2.32
VPS50Q96JG6 RNU6-466P-201ENST00000391224 103 ntBASIC0.55□□□□□ -2.32
VPS50Q96JG6 SNORA68.3-201ENST00000515906 83 ntBASIC0.55□□□□□ -2.32
VPS50Q96JG6 Y_RNA.677-201ENST00000516401 85 ntBASIC0.55□□□□□ -2.32
VPS50Q96JG6 RNU7-13P-201ENST00000516413 62 ntBASIC0.55□□□□□ -2.32
VPS50Q96JG6 MIR548AG2-201ENST00000581228 64 ntBASIC0.55□□□□□ -2.32
VPS50Q96JG6 SNORD114-26-201ENST00000363543 72 ntBASIC0.54□□□□□ -2.32
VPS50Q96JG6 MIR488-201ENST00000365739 83 ntBASIC0.54□□□□□ -2.32
VPS50Q96JG6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS50Q96JG6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS50Q96JG6 RNA5SP480-201ENST00000516840 109 ntBASIC0.54□□□□□ -2.32
VPS50Q96JG6 MIR4752-201ENST00000579672 72 ntBASIC0.54□□□□□ -2.32
VPS50Q96JG6 RN7SL793P-201ENST00000583259 296 ntBASIC0.54□□□□□ -2.32
VPS50Q96JG6 AC098934.3-201ENST00000430450 190 ntBASIC0.53□□□□□ -2.32
VPS50Q96JG6 RN7SKP12-201ENST00000516275 143 ntBASIC0.53□□□□□ -2.32
VPS50Q96JG6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
VPS50Q96JG6 Y_RNA.96-201ENST00000363092 109 ntBASIC0.52□□□□□ -2.33
VPS50Q96JG6 RNU6-269P-201ENST00000391077 97 ntBASIC0.52□□□□□ -2.33
VPS50Q96JG6 MIR936-201ENST00000401264 98 ntBASIC0.52□□□□□ -2.33
VPS50Q96JG6 SNORD71-201ENST00000411292 86 ntBASIC0.52□□□□□ -2.33
VPS50Q96JG6 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
VPS50Q96JG6 RNU6-287P-201ENST00000516230 98 ntBASIC0.52□□□□□ -2.33
VPS50Q96JG6 AC026421.1-201ENST00000519101 163 ntBASIC0.52□□□□□ -2.33
VPS50Q96JG6 MIR2052-201ENST00000636055 55 ntBASIC0.52□□□□□ -2.33
VPS50Q96JG6 SNORD114-23-201ENST00000363536 72 ntBASIC0.51□□□□□ -2.33
VPS50Q96JG6 SNORD116-10-201ENST00000363791 102 ntBASIC0.51□□□□□ -2.33
VPS50Q96JG6 RNU6-1126P-201ENST00000384002 107 ntBASIC0.51□□□□□ -2.33
VPS50Q96JG6 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
VPS50Q96JG6 Y_RNA.596-201ENST00000410462 109 ntBASIC0.51□□□□□ -2.33
VPS50Q96JG6 SNORD4B-201ENST00000459083 72 ntBASIC0.51□□□□□ -2.33
VPS50Q96JG6 MIR4696-201ENST00000581431 70 ntBASIC0.51□□□□□ -2.33
VPS50Q96JG6 MIR4536-1-201ENST00000583537 88 ntBASIC0.51□□□□□ -2.33
VPS50Q96JG6 MALAT1.1-201ENST00000618249 95 ntBASIC0.51□□□□□ -2.33
VPS50Q96JG6 AC243829.3-201ENST00000622177 108 ntBASIC0.51□□□□□ -2.33
VPS50Q96JG6 AL162376.1-201ENST00000624117 175 ntBASIC0.51□□□□□ -2.33
VPS50Q96JG6 Y_RNA.207-201ENST00000364142 106 ntBASIC0.5□□□□□ -2.33
VPS50Q96JG6 Y_RNA.609-201ENST00000410669 89 ntBASIC0.5□□□□□ -2.33
VPS50Q96JG6 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
VPS50Q96JG6 RNU6-65P-201ENST00000516332 98 ntBASIC0.5□□□□□ -2.33
VPS50Q96JG6 MTRNR2L2-201ENST00000604882 87 ntBASIC0.5□□□□□ -2.33
VPS50Q96JG6 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 MIRLET7F1-201ENST00000362202 87 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 RNU6-664P-201ENST00000362381 107 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 SNORD44.1-201ENST00000363202 61 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 RNU6-132P-201ENST00000383863 107 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 Y_RNA.540-201ENST00000384638 111 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 RNY1P7-201ENST00000384743 110 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 RNU6-519P-201ENST00000410590 108 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 MIR2113-201ENST00000459007 91 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 RNU1-29P-201ENST00000606574 126 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 AC010487.4-201ENST00000637027 61 ntBASIC0.49□□□□□ -2.33
VPS50Q96JG6 SNORD101-201ENST00000384027 73 ntBASIC0.48□□□□□ -2.33
VPS50Q96JG6 MIR4711-201ENST00000578274 70 ntBASIC0.48□□□□□ -2.33
VPS50Q96JG6 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
VPS50Q96JG6 SNORD115-44-201ENST00000365391 82 ntBASIC0.47□□□□□ -2.33
VPS50Q96JG6 Y_RNA.423-201ENST00000384057 113 ntBASIC0.47□□□□□ -2.33
VPS50Q96JG6 RNY1P4-201ENST00000384595 115 ntBASIC0.47□□□□□ -2.33
VPS50Q96JG6 MIR519E-201ENST00000385075 84 ntBASIC0.47□□□□□ -2.33
VPS50Q96JG6 RNU2-59P-201ENST00000410482 191 ntBASIC0.47□□□□□ -2.33
VPS50Q96JG6 MIR6755-201ENST00000619993 66 ntBASIC0.47□□□□□ -2.33
VPS50Q96JG6 MIR193B-201ENST00000384907 83 ntBASIC0.46□□□□□ -2.34
VPS50Q96JG6 RNA5SP436-201ENST00000516020 115 ntBASIC0.46□□□□□ -2.34
VPS50Q96JG6 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
VPS50Q96JG6 SNORA70.25-201ENST00000612741 95 ntBASIC0.46□□□□□ -2.34
VPS50Q96JG6 RNU6-1131P-201ENST00000364955 107 ntBASIC0.45□□□□□ -2.34
VPS50Q96JG6 MIR617-201ENST00000385030 97 ntBASIC0.45□□□□□ -2.34
VPS50Q96JG6 RNA5SP484-201ENST00000458857 111 ntBASIC0.45□□□□□ -2.34
VPS50Q96JG6 RNU6-1232P-201ENST00000516299 86 ntBASIC0.45□□□□□ -2.34
VPS50Q96JG6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS50Q96JG6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.45□□□□□ -2.34
VPS50Q96JG6 RNU6-49P-201ENST00000384256 107 ntBASIC0.44□□□□□ -2.34
VPS50Q96JG6 RNA5SP292-201ENST00000390974 118 ntBASIC0.44□□□□□ -2.34
VPS50Q96JG6 MIR3064-201ENST00000581130 66 ntBASIC0.44□□□□□ -2.34
VPS50Q96JG6 RNU4-32P-201ENST00000363404 141 ntBASIC0.43□□□□□ -2.34
VPS50Q96JG6 RNA5SP499-201ENST00000363982 119 ntBASIC0.43□□□□□ -2.34
VPS50Q96JG6 RNY4P30-201ENST00000410216 95 ntBASIC0.43□□□□□ -2.34
VPS50Q96JG6 NAMPTP3-201ENST00000569273 224 ntBASIC0.43□□□□□ -2.34
VPS50Q96JG6 Y_RNA.239-201ENST00000364444 113 ntBASIC0.42□□□□□ -2.34
VPS50Q96JG6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.42□□□□□ -2.34
VPS50Q96JG6 MIR7-2-201ENST00000384970 110 ntBASIC0.42□□□□□ -2.34
VPS50Q96JG6 AC093423.1-201ENST00000440817 142 ntBASIC0.42□□□□□ -2.34
VPS50Q96JG6 RNU1-141P-201ENST00000364623 158 ntBASIC0.41□□□□□ -2.34
VPS50Q96JG6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
VPS50Q96JG6 MIR1273G-201ENST00000577677 100 ntBASIC0.41□□□□□ -2.34
VPS50Q96JG6 AC104996.3-201ENST00000590718 94 ntBASIC0.41□□□□□ -2.34
VPS50Q96JG6 SNORD115-27-201ENST00000364430 82 ntBASIC0.4□□□□□ -2.35
VPS50Q96JG6 RNU6-811P-201ENST00000384069 107 ntBASIC0.4□□□□□ -2.35
VPS50Q96JG6 RNU6-935P-201ENST00000410371 100 ntBASIC0.4□□□□□ -2.35
VPS50Q96JG6 RNU7-74P-201ENST00000459104 62 ntBASIC0.4□□□□□ -2.35
VPS50Q96JG6 RNU6-509P-201ENST00000363519 107 ntBASIC0.39□□□□□ -2.35
VPS50Q96JG6 Y_RNA.220-201ENST00000364244 109 ntBASIC0.39□□□□□ -2.35
VPS50Q96JG6 MIR451A-201ENST00000385059 72 ntBASIC0.39□□□□□ -2.35
VPS50Q96JG6 SNORD90-201ENST00000391145 111 ntBASIC0.39□□□□□ -2.35
VPS50Q96JG6 RNU6-863P-201ENST00000515989 104 ntBASIC0.39□□□□□ -2.35
VPS50Q96JG6 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.39□□□□□ -2.35
VPS50Q96JG6 RNU6-815P-201ENST00000384080 113 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms