Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
CTHRC1Q96CG8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.62□□□□□ -2.31
CTHRC1Q96CG8 Y_RNA.30-201ENST00000362572 97 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 SNORA36.1-201ENST00000363424 132 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 RNA5SP517-201ENST00000364724 117 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 RNU6-716P-201ENST00000365621 103 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 SNORA8.2-201ENST00000384372 139 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 RNY4P30-201ENST00000410216 95 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 SNORA40.8-201ENST00000411034 126 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 AL161932.1-201ENST00000437408 146 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 RNU7-74P-201ENST00000459104 62 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 RNU6-1265P-201ENST00000516342 103 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 MIR1273G-201ENST00000577677 100 ntBASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CTHRC1Q96CG8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CTHRC1Q96CG8 RNU6-726P-201ENST00000364680 107 ntBASIC0.59□□□□□ -2.31
CTHRC1Q96CG8 Y_RNA.609-201ENST00000410669 89 ntBASIC0.59□□□□□ -2.31
CTHRC1Q96CG8 SNORD4B-201ENST00000459083 72 ntBASIC0.59□□□□□ -2.31
CTHRC1Q96CG8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.59□□□□□ -2.31
CTHRC1Q96CG8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.59□□□□□ -2.31
CTHRC1Q96CG8 RNU6-664P-201ENST00000362381 107 ntBASIC0.58□□□□□ -2.32
CTHRC1Q96CG8 SNORD41.1-201ENST00000391000 69 ntBASIC0.58□□□□□ -2.32
CTHRC1Q96CG8 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
CTHRC1Q96CG8 MIR3920-201ENST00000581751 86 ntBASIC0.58□□□□□ -2.32
CTHRC1Q96CG8 Y_RNA.239-201ENST00000364444 113 ntBASIC0.57□□□□□ -2.32
CTHRC1Q96CG8 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
CTHRC1Q96CG8 SNORD101-201ENST00000384027 73 ntBASIC0.57□□□□□ -2.32
CTHRC1Q96CG8 RNU7-85P-201ENST00000458851 63 ntBASIC0.57□□□□□ -2.32
CTHRC1Q96CG8 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
CTHRC1Q96CG8 RNU6-1057P-201ENST00000517162 102 ntBASIC0.57□□□□□ -2.32
CTHRC1Q96CG8 AC026421.1-201ENST00000519101 163 ntBASIC0.57□□□□□ -2.32
CTHRC1Q96CG8 U6.100-201ENST00000636230 99 ntBASIC0.57□□□□□ -2.32
CTHRC1Q96CG8 SNORD118-201ENST00000363593 134 ntBASIC0.56□□□□□ -2.32
CTHRC1Q96CG8 RNA5SP457-201ENST00000363657 124 ntBASIC0.56□□□□□ -2.32
CTHRC1Q96CG8 MIR488-201ENST00000365739 83 ntBASIC0.56□□□□□ -2.32
CTHRC1Q96CG8 SNORD116-22-201ENST00000384430 92 ntBASIC0.56□□□□□ -2.32
CTHRC1Q96CG8 MIR518A1-201ENST00000385068 85 ntBASIC0.56□□□□□ -2.32
CTHRC1Q96CG8 MIR548U-201ENST00000390728 81 ntBASIC0.56□□□□□ -2.32
CTHRC1Q96CG8 RNU6-287P-201ENST00000516230 98 ntBASIC0.56□□□□□ -2.32
CTHRC1Q96CG8 RN7SKP12-201ENST00000516275 143 ntBASIC0.56□□□□□ -2.32
CTHRC1Q96CG8 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
CTHRC1Q96CG8 RNU6-509P-201ENST00000363519 107 ntBASIC0.55□□□□□ -2.32
CTHRC1Q96CG8 SNORD114-23-201ENST00000363536 72 ntBASIC0.55□□□□□ -2.32
CTHRC1Q96CG8 RNU6-75P-201ENST00000515944 104 ntBASIC0.55□□□□□ -2.32
CTHRC1Q96CG8 MIR4696-201ENST00000581431 70 ntBASIC0.55□□□□□ -2.32
CTHRC1Q96CG8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.55□□□□□ -2.32
CTHRC1Q96CG8 SNORA25.18-201ENST00000607153 114 ntBASIC0.55□□□□□ -2.32
CTHRC1Q96CG8 MIR7107-201ENST00000611489 80 ntBASIC0.55□□□□□ -2.32
CTHRC1Q96CG8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.55□□□□□ -2.32
CTHRC1Q96CG8 Y_RNA.207-201ENST00000364142 106 ntBASIC0.54□□□□□ -2.32
CTHRC1Q96CG8 RNU6-1131P-201ENST00000364955 107 ntBASIC0.54□□□□□ -2.32
CTHRC1Q96CG8 AC010487.4-201ENST00000637027 61 ntBASIC0.54□□□□□ -2.32
CTHRC1Q96CG8 MIR924-201ENST00000638017 53 ntBASIC0.54□□□□□ -2.32
CTHRC1Q96CG8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
CTHRC1Q96CG8 Y_RNA.115-201ENST00000363272 98 ntBASIC0.53□□□□□ -2.32
CTHRC1Q96CG8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.53□□□□□ -2.32
CTHRC1Q96CG8 MIR617-201ENST00000385030 97 ntBASIC0.53□□□□□ -2.32
CTHRC1Q96CG8 MIR936-201ENST00000401264 98 ntBASIC0.53□□□□□ -2.32
CTHRC1Q96CG8 RNA5SP170-201ENST00000517150 101 ntBASIC0.53□□□□□ -2.32
CTHRC1Q96CG8 RNU6-844P-201ENST00000517175 102 ntBASIC0.53□□□□□ -2.32
CTHRC1Q96CG8 RNU4-32P-201ENST00000363404 141 ntBASIC0.52□□□□□ -2.33
CTHRC1Q96CG8 Y_RNA.178-201ENST00000363832 102 ntBASIC0.52□□□□□ -2.33
CTHRC1Q96CG8 RNU6-811P-201ENST00000384069 107 ntBASIC0.52□□□□□ -2.33
CTHRC1Q96CG8 RNY1P7-201ENST00000384743 110 ntBASIC0.52□□□□□ -2.33
CTHRC1Q96CG8 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
CTHRC1Q96CG8 RNU2-59P-201ENST00000410482 191 ntBASIC0.52□□□□□ -2.33
CTHRC1Q96CG8 AC098934.3-201ENST00000430450 190 ntBASIC0.52□□□□□ -2.33
CTHRC1Q96CG8 MIR2113-201ENST00000459007 91 ntBASIC0.52□□□□□ -2.33
CTHRC1Q96CG8 MIRLET7F1-201ENST00000362202 87 ntBASIC0.51□□□□□ -2.33
CTHRC1Q96CG8 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
CTHRC1Q96CG8 RNU6-269P-201ENST00000391077 97 ntBASIC0.51□□□□□ -2.33
CTHRC1Q96CG8 MIR1236-201ENST00000408340 102 ntBASIC0.51□□□□□ -2.33
CTHRC1Q96CG8 RNU6-935P-201ENST00000410371 100 ntBASIC0.51□□□□□ -2.33
CTHRC1Q96CG8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
CTHRC1Q96CG8 AL162376.1-201ENST00000624117 175 ntBASIC0.51□□□□□ -2.33
CTHRC1Q96CG8 AC073869.9-201ENST00000641610 120 ntBASIC0.51□□□□□ -2.33
CTHRC1Q96CG8 RNA5SP347-201ENST00000362445 119 ntBASIC0.5□□□□□ -2.33
CTHRC1Q96CG8 RNU6-1134P-201ENST00000365156 101 ntBASIC0.5□□□□□ -2.33
CTHRC1Q96CG8 Y_RNA.369-201ENST00000365568 117 ntBASIC0.5□□□□□ -2.33
CTHRC1Q96CG8 MIR216B-201ENST00000390186 82 ntBASIC0.5□□□□□ -2.33
CTHRC1Q96CG8 AC069271.1-201ENST00000445577 156 ntBASIC0.5□□□□□ -2.33
CTHRC1Q96CG8 RNU6-863P-201ENST00000515989 104 ntBASIC0.5□□□□□ -2.33
CTHRC1Q96CG8 MIR5582-201ENST00000579697 68 ntBASIC0.5□□□□□ -2.33
CTHRC1Q96CG8 MIR4668-201ENST00000582284 70 ntBASIC0.5□□□□□ -2.33
CTHRC1Q96CG8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CTHRC1Q96CG8 Y_RNA.68-201ENST00000362881 102 ntBASIC0.49□□□□□ -2.33
CTHRC1Q96CG8 RNU6-49P-201ENST00000384256 107 ntBASIC0.49□□□□□ -2.33
CTHRC1Q96CG8 Y_RNA.491-201ENST00000384417 107 ntBASIC0.49□□□□□ -2.33
CTHRC1Q96CG8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CTHRC1Q96CG8 MIR3064-201ENST00000581130 66 ntBASIC0.49□□□□□ -2.33
CTHRC1Q96CG8 AC104996.3-201ENST00000590718 94 ntBASIC0.49□□□□□ -2.33
CTHRC1Q96CG8 RNU6-132P-201ENST00000383863 107 ntBASIC0.48□□□□□ -2.33
CTHRC1Q96CG8 MIR519E-201ENST00000385075 84 ntBASIC0.48□□□□□ -2.33
CTHRC1Q96CG8 RNA5SP330-201ENST00000517096 96 ntBASIC0.48□□□□□ -2.33
CTHRC1Q96CG8 MIR548AG2-201ENST00000581228 64 ntBASIC0.48□□□□□ -2.33
CTHRC1Q96CG8 MIR8087-201ENST00000612745 78 ntBASIC0.48□□□□□ -2.33
CTHRC1Q96CG8 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
CTHRC1Q96CG8 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.48□□□□□ -2.33
CTHRC1Q96CG8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 250.3 ms