Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU7-161P-201ENST00000517289 62 ntBASIC0.87□□□□□ -2.27
RTF1Q92541 AC244669.1-204ENST00000621564 178 ntBASIC0.87□□□□□ -2.27
RTF1Q92541 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
RTF1Q92541 Y_RNA.609-201ENST00000410669 89 ntBASIC0.86□□□□□ -2.27
RTF1Q92541 AL606490.4-201ENST00000423117 127 ntBASIC0.86□□□□□ -2.27
RTF1Q92541 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.86□□□□□ -2.27
RTF1Q92541 RNU6-65P-201ENST00000516332 98 ntBASIC0.86□□□□□ -2.27
RTF1Q92541 SCARNA16.5-201ENST00000517114 183 ntBASIC0.86□□□□□ -2.27
RTF1Q92541 AC026421.1-201ENST00000519101 163 ntBASIC0.86□□□□□ -2.27
RTF1Q92541 MIR4536-1-201ENST00000583537 88 ntBASIC0.86□□□□□ -2.27
RTF1Q92541 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
RTF1Q92541 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.86□□□□□ -2.27
RTF1Q92541 SNORA36.2-201ENST00000384004 127 ntBASIC0.85□□□□□ -2.27
RTF1Q92541 SNORD116-22-201ENST00000384430 92 ntBASIC0.85□□□□□ -2.27
RTF1Q92541 RNU6-75P-201ENST00000515944 104 ntBASIC0.85□□□□□ -2.27
RTF1Q92541 Y_RNA.681-201ENST00000516445 113 ntBASIC0.85□□□□□ -2.27
RTF1Q92541 RNA5SP94-201ENST00000516917 108 ntBASIC0.85□□□□□ -2.27
RTF1Q92541 RNU6-1255P-201ENST00000363434 112 ntBASIC0.84□□□□□ -2.27
RTF1Q92541 SNORD115-44-201ENST00000365391 82 ntBASIC0.84□□□□□ -2.27
RTF1Q92541 MTRNR2L2-201ENST00000604882 87 ntBASIC0.84□□□□□ -2.27
RTF1Q92541 AC067863.3-201ENST00000624172 122 ntBASIC0.84□□□□□ -2.27
RTF1Q92541 MIR6828-201ENST00000636181 60 ntBASIC0.84□□□□□ -2.27
RTF1Q92541 MIR924-201ENST00000638017 53 ntBASIC0.84□□□□□ -2.27
RTF1Q92541 MIR140-201ENST00000385282 100 ntBASIC0.83□□□□□ -2.28
RTF1Q92541 Y_RNA.596-201ENST00000410462 109 ntBASIC0.83□□□□□ -2.28
RTF1Q92541 RNU7-104P-201ENST00000459398 79 ntBASIC0.83□□□□□ -2.28
RTF1Q92541 RNU7-13P-201ENST00000516413 62 ntBASIC0.83□□□□□ -2.28
RTF1Q92541 Y_RNA.115-201ENST00000363272 98 ntBASIC0.82□□□□□ -2.28
RTF1Q92541 RNU6-294P-201ENST00000364999 102 ntBASIC0.82□□□□□ -2.28
RTF1Q92541 MIR4668-201ENST00000582284 70 ntBASIC0.82□□□□□ -2.28
RTF1Q92541 SNORD41.1-201ENST00000391000 69 ntBASIC0.81□□□□□ -2.28
RTF1Q92541 MIR6513-201ENST00000621188 64 ntBASIC0.81□□□□□ -2.28
RTF1Q92541 U6.100-201ENST00000636230 99 ntBASIC0.81□□□□□ -2.28
RTF1Q92541 SNORA36.1-201ENST00000363424 132 ntBASIC0.8□□□□□ -2.28
RTF1Q92541 Y_RNA.558-201ENST00000384685 113 ntBASIC0.8□□□□□ -2.28
RTF1Q92541 RNA5SP395-201ENST00000516567 118 ntBASIC0.8□□□□□ -2.28
RTF1Q92541 MIR3920-201ENST00000581751 86 ntBASIC0.8□□□□□ -2.28
RTF1Q92541 RNU6-664P-201ENST00000362381 107 ntBASIC0.79□□□□□ -2.28
RTF1Q92541 RNU6-726P-201ENST00000364680 107 ntBASIC0.79□□□□□ -2.28
RTF1Q92541 RNU6-1134P-201ENST00000365156 101 ntBASIC0.79□□□□□ -2.28
RTF1Q92541 RNY1P8-201ENST00000383970 114 ntBASIC0.79□□□□□ -2.28
RTF1Q92541 SNORD101-201ENST00000384027 73 ntBASIC0.79□□□□□ -2.28
RTF1Q92541 MIR548U-201ENST00000390728 81 ntBASIC0.79□□□□□ -2.28
RTF1Q92541 Y_RNA.620-201ENST00000411009 88 ntBASIC0.79□□□□□ -2.28
RTF1Q92541 RNU6-811P-201ENST00000384069 107 ntBASIC0.78□□□□□ -2.28
RTF1Q92541 RNA5SP268-201ENST00000516828 124 ntBASIC0.78□□□□□ -2.28
RTF1Q92541 MIR4696-201ENST00000581431 70 ntBASIC0.78□□□□□ -2.28
RTF1Q92541 AC006254.2-201ENST00000603259 279 ntBASIC0.78□□□□□ -2.28
RTF1Q92541 Y_RNA.17-201ENST00000362433 111 ntBASIC0.77□□□□□ -2.29
RTF1Q92541 RNA5SP347-201ENST00000362445 119 ntBASIC0.77□□□□□ -2.29
RTF1Q92541 RNU6-633P-201ENST00000362612 103 ntBASIC0.77□□□□□ -2.29
RTF1Q92541 SNORD114-23-201ENST00000363536 72 ntBASIC0.77□□□□□ -2.29
RTF1Q92541 RNU6-219P-201ENST00000364728 107 ntBASIC0.77□□□□□ -2.29
RTF1Q92541 RNU6-675P-201ENST00000384236 104 ntBASIC0.77□□□□□ -2.29
RTF1Q92541 MIR548L-201ENST00000408303 86 ntBASIC0.77□□□□□ -2.29
RTF1Q92541 RNU7-74P-201ENST00000459104 62 ntBASIC0.77□□□□□ -2.29
RTF1Q92541 RNA5SP227-201ENST00000516184 113 ntBASIC0.77□□□□□ -2.29
RTF1Q92541 AC010487.4-201ENST00000637027 61 ntBASIC0.77□□□□□ -2.29
RTF1Q92541 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
RTF1Q92541 Y_RNA.239-201ENST00000364444 113 ntBASIC0.76□□□□□ -2.29
RTF1Q92541 RNU6-1126P-201ENST00000384002 107 ntBASIC0.76□□□□□ -2.29
RTF1Q92541 SNORA8.2-201ENST00000384372 139 ntBASIC0.76□□□□□ -2.29
RTF1Q92541 RNU6-402P-201ENST00000410678 103 ntBASIC0.76□□□□□ -2.29
RTF1Q92541 MIR3064-201ENST00000581130 66 ntBASIC0.76□□□□□ -2.29
RTF1Q92541 AC104996.3-201ENST00000590718 94 ntBASIC0.76□□□□□ -2.29
RTF1Q92541 AC092634.7-201ENST00000621022 103 ntBASIC0.76□□□□□ -2.29
RTF1Q92541 RNA5SP62-201ENST00000363457 110 ntBASIC0.75□□□□□ -2.29
RTF1Q92541 Y_RNA.207-201ENST00000364142 106 ntBASIC0.75□□□□□ -2.29
RTF1Q92541 RNA5SP517-201ENST00000364724 117 ntBASIC0.75□□□□□ -2.29
RTF1Q92541 MIR1236-201ENST00000408340 102 ntBASIC0.75□□□□□ -2.29
RTF1Q92541 RNU6-287P-201ENST00000516230 98 ntBASIC0.75□□□□□ -2.29
RTF1Q92541 RNA5SP257-201ENST00000363023 116 ntBASIC0.74□□□□□ -2.29
RTF1Q92541 RNU4-32P-201ENST00000363404 141 ntBASIC0.74□□□□□ -2.29
RTF1Q92541 RNU6-132P-201ENST00000383863 107 ntBASIC0.74□□□□□ -2.29
RTF1Q92541 MIR617-201ENST00000385030 97 ntBASIC0.74□□□□□ -2.29
RTF1Q92541 Y_RNA.593-201ENST00000410292 98 ntBASIC0.74□□□□□ -2.29
RTF1Q92541 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.74□□□□□ -2.29
RTF1Q92541 MIRLET7F1-201ENST00000362202 87 ntBASIC0.73□□□□□ -2.29
RTF1Q92541 RNU6-509P-201ENST00000363519 107 ntBASIC0.73□□□□□ -2.29
RTF1Q92541 RNU6-497P-201ENST00000365316 104 ntBASIC0.73□□□□□ -2.29
RTF1Q92541 RNU6-716P-201ENST00000365621 103 ntBASIC0.73□□□□□ -2.29
RTF1Q92541 MIR519C-201ENST00000385053 87 ntBASIC0.73□□□□□ -2.29
RTF1Q92541 MIR936-201ENST00000401264 98 ntBASIC0.73□□□□□ -2.29
RTF1Q92541 RNU6-935P-201ENST00000410371 100 ntBASIC0.73□□□□□ -2.29
RTF1Q92541 SNORA40.8-201ENST00000411034 126 ntBASIC0.73□□□□□ -2.29
RTF1Q92541 MIR2113-201ENST00000459007 91 ntBASIC0.73□□□□□ -2.29
RTF1Q92541 Y_RNA.491-201ENST00000384417 107 ntBASIC0.72□□□□□ -2.29
RTF1Q92541 MIR92A1-201ENST00000385233 78 ntBASIC0.72□□□□□ -2.29
RTF1Q92541 MIR548AG2-201ENST00000581228 64 ntBASIC0.72□□□□□ -2.29
RTF1Q92541 MIR7107-201ENST00000611489 80 ntBASIC0.72□□□□□ -2.29
RTF1Q92541 AL109933.3-201ENST00000619095 188 ntBASIC0.72□□□□□ -2.29
RTF1Q92541 AL162376.1-201ENST00000624117 175 ntBASIC0.72□□□□□ -2.29
RTF1Q92541 RNA5SP499-201ENST00000363982 119 ntBASIC0.71□□□□□ -2.3
RTF1Q92541 MIR450A2-201ENST00000385022 100 ntBASIC0.71□□□□□ -2.3
RTF1Q92541 AC018659.1-201ENST00000551083 169 ntBASIC0.71□□□□□ -2.3
RTF1Q92541 SNORD118-201ENST00000363593 134 ntBASIC0.7□□□□□ -2.3
RTF1Q92541 SNORD115-27-201ENST00000364430 82 ntBASIC0.7□□□□□ -2.3
RTF1Q92541 RNA5SP292-201ENST00000390974 118 ntBASIC0.7□□□□□ -2.3
RTF1Q92541 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
RTF1Q92541 SNORD71-201ENST00000411292 86 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 246 ms