Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MIR1-1-201ENST00000362147 71 ntBASIC1.12□□□□□ -2.23
SIMC1Q8NDZ2 MIR520E-201ENST00000384867 87 ntBASIC1.12□□□□□ -2.23
SIMC1Q8NDZ2 SNORD90-201ENST00000391145 111 ntBASIC1.12□□□□□ -2.23
SIMC1Q8NDZ2 MIR889-201ENST00000401280 79 ntBASIC1.12□□□□□ -2.23
SIMC1Q8NDZ2 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
SIMC1Q8NDZ2 RPS29P1-201ENST00000465274 159 ntBASIC1.12□□□□□ -2.23
SIMC1Q8NDZ2 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
SIMC1Q8NDZ2 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.12□□□□□ -2.23
SIMC1Q8NDZ2 U6.100-201ENST00000636230 99 ntBASIC1.12□□□□□ -2.23
SIMC1Q8NDZ2 RNU6-161P-201ENST00000363051 106 ntBASIC1.11□□□□□ -2.23
SIMC1Q8NDZ2 RNU1-119P-201ENST00000391122 165 ntBASIC1.11□□□□□ -2.23
SIMC1Q8NDZ2 MIR1827-201ENST00000408549 66 ntBASIC1.11□□□□□ -2.23
SIMC1Q8NDZ2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.11□□□□□ -2.23
SIMC1Q8NDZ2 MIR4696-201ENST00000581431 70 ntBASIC1.11□□□□□ -2.23
SIMC1Q8NDZ2 AL136317.1-201ENST00000612653 226 ntBASIC1.11□□□□□ -2.23
SIMC1Q8NDZ2 MIRLET7A1-201ENST00000362295 80 ntBASIC1.1□□□□□ -2.23
SIMC1Q8NDZ2 RNU6-664P-201ENST00000362381 107 ntBASIC1.1□□□□□ -2.23
SIMC1Q8NDZ2 RNU6-686P-201ENST00000364839 107 ntBASIC1.1□□□□□ -2.23
SIMC1Q8NDZ2 MIR520F-201ENST00000384824 87 ntBASIC1.1□□□□□ -2.23
SIMC1Q8NDZ2 AC244505.6-201ENST00000452829 130 ntBASIC1.1□□□□□ -2.23
SIMC1Q8NDZ2 FGF7P7-201ENST00000514120 227 ntBASIC1.1□□□□□ -2.23
SIMC1Q8NDZ2 RNU6-1108P-201ENST00000516308 104 ntBASIC1.1□□□□□ -2.23
SIMC1Q8NDZ2 MTRNR2L2-201ENST00000604882 87 ntBASIC1.1□□□□□ -2.23
SIMC1Q8NDZ2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.23
SIMC1Q8NDZ2 Y_RNA.239-201ENST00000364444 113 ntBASIC1.09□□□□□ -2.23
SIMC1Q8NDZ2 SNORD101-201ENST00000384027 73 ntBASIC1.09□□□□□ -2.23
SIMC1Q8NDZ2 RNU6-1265P-201ENST00000516342 103 ntBASIC1.09□□□□□ -2.23
SIMC1Q8NDZ2 AC145423.2-201ENST00000610631 239 ntBASIC1.09□□□□□ -2.23
SIMC1Q8NDZ2 RNU6-1094P-201ENST00000362416 104 ntBASIC1.08□□□□□ -2.24
SIMC1Q8NDZ2 RNU6-1229P-201ENST00000364295 107 ntBASIC1.08□□□□□ -2.24
SIMC1Q8NDZ2 MIR548J-201ENST00000408833 112 ntBASIC1.08□□□□□ -2.24
SIMC1Q8NDZ2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
SIMC1Q8NDZ2 Y_RNA.660-201ENST00000516002 120 ntBASIC1.08□□□□□ -2.24
SIMC1Q8NDZ2 uc_338.16-201ENST00000621804 95 ntBASIC1.08□□□□□ -2.24
SIMC1Q8NDZ2 Y_RNA.32-201ENST00000362589 110 ntBASIC1.07□□□□□ -2.24
SIMC1Q8NDZ2 RNU6-1051P-201ENST00000365471 102 ntBASIC1.07□□□□□ -2.24
SIMC1Q8NDZ2 MIR520H-201ENST00000385126 88 ntBASIC1.07□□□□□ -2.24
SIMC1Q8NDZ2 SNORD77.2-201ENST00000391045 68 ntBASIC1.07□□□□□ -2.24
SIMC1Q8NDZ2 Y_RNA.596-201ENST00000410462 109 ntBASIC1.07□□□□□ -2.24
SIMC1Q8NDZ2 SNORD124-201ENST00000459577 104 ntBASIC1.07□□□□□ -2.24
SIMC1Q8NDZ2 SNORA31.14-201ENST00000516728 116 ntBASIC1.07□□□□□ -2.24
SIMC1Q8NDZ2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.07□□□□□ -2.24
SIMC1Q8NDZ2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SIMC1Q8NDZ2 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
SIMC1Q8NDZ2 Y_RNA.205-201ENST00000364128 113 ntBASIC1.06□□□□□ -2.24
SIMC1Q8NDZ2 snoU13.17-201ENST00000458802 104 ntBASIC1.06□□□□□ -2.24
SIMC1Q8NDZ2 AC025627.3-201ENST00000582078 182 ntBASIC1.06□□□□□ -2.24
SIMC1Q8NDZ2 U7.4-201ENST00000614961 63 ntBASIC1.06□□□□□ -2.24
SIMC1Q8NDZ2 RNU6-208P-201ENST00000362431 107 ntBASIC1.05□□□□□ -2.24
SIMC1Q8NDZ2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.05□□□□□ -2.24
SIMC1Q8NDZ2 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
SIMC1Q8NDZ2 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
SIMC1Q8NDZ2 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.05□□□□□ -2.24
SIMC1Q8NDZ2 Y_RNA.788-201ENST00000622394 112 ntBASIC1.05□□□□□ -2.24
SIMC1Q8NDZ2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SIMC1Q8NDZ2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SIMC1Q8NDZ2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.04□□□□□ -2.24
SIMC1Q8NDZ2 Y_RNA.207-201ENST00000364142 106 ntBASIC1.04□□□□□ -2.24
SIMC1Q8NDZ2 Y_RNA.264-201ENST00000364665 102 ntBASIC1.04□□□□□ -2.24
SIMC1Q8NDZ2 Y_RNA.532-201ENST00000384590 113 ntBASIC1.04□□□□□ -2.24
SIMC1Q8NDZ2 SNORD89-201ENST00000390981 114 ntBASIC1.04□□□□□ -2.24
SIMC1Q8NDZ2 RNU6-380P-201ENST00000410207 107 ntBASIC1.04□□□□□ -2.24
SIMC1Q8NDZ2 U7.7-201ENST00000459276 60 ntBASIC1.04□□□□□ -2.24
SIMC1Q8NDZ2 MIR3140-201ENST00000583685 90 ntBASIC1.04□□□□□ -2.24
SIMC1Q8NDZ2 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
SIMC1Q8NDZ2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SIMC1Q8NDZ2 SCARNA18B-201ENST00000458806 135 ntBASIC1.03□□□□□ -2.24
SIMC1Q8NDZ2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.03□□□□□ -2.24
SIMC1Q8NDZ2 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.03□□□□□ -2.24
SIMC1Q8NDZ2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 SNORD115-24-201ENST00000363528 82 ntBASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 RNA5SP403-201ENST00000363598 108 ntBASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 RNY4P3-201ENST00000365254 95 ntBASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 Y_RNA.565-201ENST00000384719 101 ntBASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 RNU6-935P-201ENST00000410371 100 ntBASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 AC002350.1-201ENST00000490759 375 ntBASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 RNU6-287P-201ENST00000516230 98 ntBASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 RNA5SP255-201ENST00000516370 107 ntBASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.02□□□□□ -2.25
SIMC1Q8NDZ2 RNU5F-1-201ENST00000362507 117 ntBASIC1.01□□□□□ -2.25
SIMC1Q8NDZ2 Y_RNA.374-201ENST00000365606 101 ntBASIC1.01□□□□□ -2.25
SIMC1Q8NDZ2 MIR451A-201ENST00000385059 72 ntBASIC1.01□□□□□ -2.25
SIMC1Q8NDZ2 RNU6-1052P-201ENST00000411398 104 ntBASIC1.01□□□□□ -2.25
SIMC1Q8NDZ2 RNU6-719P-201ENST00000516671 104 ntBASIC1.01□□□□□ -2.25
SIMC1Q8NDZ2 RNU7-161P-201ENST00000517289 62 ntBASIC1.01□□□□□ -2.25
SIMC1Q8NDZ2 YWHAEP2-201ENST00000580066 112 ntBASIC1.01□□□□□ -2.25
SIMC1Q8NDZ2 YWHAEP3-201ENST00000582767 121 ntBASIC1.01□□□□□ -2.25
SIMC1Q8NDZ2 MIR4484-201ENST00000582855 83 ntBASIC1.01□□□□□ -2.25
SIMC1Q8NDZ2 RN7SL793P-201ENST00000583259 296 ntBASIC1.01□□□□□ -2.25
SIMC1Q8NDZ2 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
SIMC1Q8NDZ2 Y_RNA.12-201ENST00000362393 112 ntBASIC1□□□□□ -2.25
SIMC1Q8NDZ2 SNORA24B-201ENST00000384176 131 ntBASIC1□□□□□ -2.25
SIMC1Q8NDZ2 SNORD105-201ENST00000386910 85 ntBASIC1□□□□□ -2.25
SIMC1Q8NDZ2 RNU6-303P-201ENST00000517091 106 ntBASIC1□□□□□ -2.25
SIMC1Q8NDZ2 MIR3134-201ENST00000579433 74 ntBASIC1□□□□□ -2.25
SIMC1Q8NDZ2 RNA5SP117-201ENST00000365294 118 ntBASIC0.99□□□□□ -2.25
SIMC1Q8NDZ2 SNORD115-44-201ENST00000365391 82 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 257.9 ms