Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RNU6-129P-201ENST00000391022 107 ntBASIC1.49□□□□□ -2.17
PRPF40BQ6NWY9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.49□□□□□ -2.17
PRPF40BQ6NWY9 U6.100-201ENST00000636230 99 ntBASIC1.48□□□□□ -2.17
PRPF40BQ6NWY9 RNU6-24P-201ENST00000384440 107 ntBASIC1.47□□□□□ -2.17
PRPF40BQ6NWY9 MIR200A-201ENST00000384875 90 ntBASIC1.47□□□□□ -2.17
PRPF40BQ6NWY9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.47□□□□□ -2.17
PRPF40BQ6NWY9 AC244505.6-201ENST00000452829 130 ntBASIC1.47□□□□□ -2.17
PRPF40BQ6NWY9 SNORA31.14-201ENST00000516728 116 ntBASIC1.47□□□□□ -2.17
PRPF40BQ6NWY9 MIR4712-201ENST00000583750 82 ntBASIC1.47□□□□□ -2.17
PRPF40BQ6NWY9 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
PRPF40BQ6NWY9 Y_RNA.244-201ENST00000364484 109 ntBASIC1.46□□□□□ -2.18
PRPF40BQ6NWY9 RNA5SP117-201ENST00000365294 118 ntBASIC1.46□□□□□ -2.18
PRPF40BQ6NWY9 SNORD105-201ENST00000386910 85 ntBASIC1.46□□□□□ -2.18
PRPF40BQ6NWY9 Y_RNA.596-201ENST00000410462 109 ntBASIC1.46□□□□□ -2.18
PRPF40BQ6NWY9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.45□□□□□ -2.18
PRPF40BQ6NWY9 RNU6-664P-201ENST00000362381 107 ntBASIC1.45□□□□□ -2.18
PRPF40BQ6NWY9 U7.7-201ENST00000459276 60 ntBASIC1.45□□□□□ -2.18
PRPF40BQ6NWY9 RNU6-469P-201ENST00000516253 101 ntBASIC1.45□□□□□ -2.18
PRPF40BQ6NWY9 MIR4295-201ENST00000585286 85 ntBASIC1.45□□□□□ -2.18
PRPF40BQ6NWY9 uc_338.16-201ENST00000621804 95 ntBASIC1.45□□□□□ -2.18
PRPF40BQ6NWY9 SNORD115-24-201ENST00000363528 82 ntBASIC1.44□□□□□ -2.18
PRPF40BQ6NWY9 RNU6-380P-201ENST00000410207 107 ntBASIC1.44□□□□□ -2.18
PRPF40BQ6NWY9 AL450471.1-201ENST00000447509 127 ntBASIC1.44□□□□□ -2.18
PRPF40BQ6NWY9 SNORD124-201ENST00000459577 104 ntBASIC1.44□□□□□ -2.18
PRPF40BQ6NWY9 AC087343.1-201ENST00000477341 475 ntBASIC1.44□□□□□ -2.18
PRPF40BQ6NWY9 FGF7P7-201ENST00000514120 227 ntBASIC1.44□□□□□ -2.18
PRPF40BQ6NWY9 RNA5SP395-201ENST00000516567 118 ntBASIC1.44□□□□□ -2.18
PRPF40BQ6NWY9 MIR150-201ENST00000385048 84 ntBASIC1.43□□□□□ -2.18
PRPF40BQ6NWY9 RNU6-1265P-201ENST00000516342 103 ntBASIC1.43□□□□□ -2.18
PRPF40BQ6NWY9 RNU6-1057P-201ENST00000517162 102 ntBASIC1.43□□□□□ -2.18
PRPF40BQ6NWY9 MIR4696-201ENST00000581431 70 ntBASIC1.43□□□□□ -2.18
PRPF40BQ6NWY9 RN7SL793P-201ENST00000583259 296 ntBASIC1.43□□□□□ -2.18
PRPF40BQ6NWY9 RNU5F-1-201ENST00000362507 117 ntBASIC1.42□□□□□ -2.18
PRPF40BQ6NWY9 SNORA63.2-201ENST00000362603 126 ntBASIC1.42□□□□□ -2.18
PRPF40BQ6NWY9 RNU6-315P-201ENST00000362666 107 ntBASIC1.42□□□□□ -2.18
PRPF40BQ6NWY9 RNU6-161P-201ENST00000363051 106 ntBASIC1.42□□□□□ -2.18
PRPF40BQ6NWY9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.42□□□□□ -2.18
PRPF40BQ6NWY9 RNU6-1108P-201ENST00000516308 104 ntBASIC1.42□□□□□ -2.18
PRPF40BQ6NWY9 RNA5SP404-201ENST00000517118 132 ntBASIC1.42□□□□□ -2.18
PRPF40BQ6NWY9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
PRPF40BQ6NWY9 Y_RNA.94-201ENST00000363068 106 ntBASIC1.41□□□□□ -2.18
PRPF40BQ6NWY9 RNU6-624P-201ENST00000363411 107 ntBASIC1.41□□□□□ -2.18
PRPF40BQ6NWY9 RNU1-124P-201ENST00000363861 145 ntBASIC1.41□□□□□ -2.18
PRPF40BQ6NWY9 RNY4P3-201ENST00000365254 95 ntBASIC1.41□□□□□ -2.18
PRPF40BQ6NWY9 AC002350.1-201ENST00000490759 375 ntBASIC1.41□□□□□ -2.18
PRPF40BQ6NWY9 Y_RNA.660-201ENST00000516002 120 ntBASIC1.41□□□□□ -2.18
PRPF40BQ6NWY9 RNU7-13P-201ENST00000516413 62 ntBASIC1.41□□□□□ -2.18
PRPF40BQ6NWY9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
PRPF40BQ6NWY9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.18
PRPF40BQ6NWY9 MIR618-201ENST00000385287 98 ntBASIC1.4□□□□□ -2.19
PRPF40BQ6NWY9 RNU6-935P-201ENST00000410371 100 ntBASIC1.4□□□□□ -2.19
PRPF40BQ6NWY9 RNU7-104P-201ENST00000459398 79 ntBASIC1.4□□□□□ -2.19
PRPF40BQ6NWY9 RNU6-135P-201ENST00000516769 101 ntBASIC1.4□□□□□ -2.19
PRPF40BQ6NWY9 RNU6-1094P-201ENST00000362416 104 ntBASIC1.39□□□□□ -2.19
PRPF40BQ6NWY9 SNORD114-24-201ENST00000365029 72 ntBASIC1.39□□□□□ -2.19
PRPF40BQ6NWY9 SNORD115-44-201ENST00000365391 82 ntBASIC1.39□□□□□ -2.19
PRPF40BQ6NWY9 SNORD77.2-201ENST00000391045 68 ntBASIC1.39□□□□□ -2.19
PRPF40BQ6NWY9 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.39□□□□□ -2.19
PRPF40BQ6NWY9 RNU6-478P-201ENST00000363904 110 ntBASIC1.38□□□□□ -2.19
PRPF40BQ6NWY9 RNU6-686P-201ENST00000364839 107 ntBASIC1.38□□□□□ -2.19
PRPF40BQ6NWY9 RNU6-1051P-201ENST00000365471 102 ntBASIC1.38□□□□□ -2.19
PRPF40BQ6NWY9 MIR216A-201ENST00000385063 110 ntBASIC1.38□□□□□ -2.19
PRPF40BQ6NWY9 RNU6-557P-201ENST00000516842 110 ntBASIC1.38□□□□□ -2.19
PRPF40BQ6NWY9 AC025627.3-201ENST00000582078 182 ntBASIC1.38□□□□□ -2.19
PRPF40BQ6NWY9 MIR373-201ENST00000362273 69 ntBASIC1.37□□□□□ -2.19
PRPF40BQ6NWY9 RNU6-208P-201ENST00000362431 107 ntBASIC1.37□□□□□ -2.19
PRPF40BQ6NWY9 RNU6-1229P-201ENST00000364295 107 ntBASIC1.37□□□□□ -2.19
PRPF40BQ6NWY9 MIR451A-201ENST00000385059 72 ntBASIC1.37□□□□□ -2.19
PRPF40BQ6NWY9 MIR644A-201ENST00000385262 94 ntBASIC1.37□□□□□ -2.19
PRPF40BQ6NWY9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.37□□□□□ -2.19
PRPF40BQ6NWY9 MTRNR2L2-201ENST00000604882 87 ntBASIC1.37□□□□□ -2.19
PRPF40BQ6NWY9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.37□□□□□ -2.19
PRPF40BQ6NWY9 Y_RNA.264-201ENST00000364665 102 ntBASIC1.36□□□□□ -2.19
PRPF40BQ6NWY9 MIR4662A-201ENST00000637499 67 ntBASIC1.36□□□□□ -2.19
PRPF40BQ6NWY9 Y_RNA.207-201ENST00000364142 106 ntBASIC1.35□□□□□ -2.19
PRPF40BQ6NWY9 MIR573-201ENST00000384964 99 ntBASIC1.35□□□□□ -2.19
PRPF40BQ6NWY9 SNORD90-201ENST00000391145 111 ntBASIC1.35□□□□□ -2.19
PRPF40BQ6NWY9 MIR5000-201ENST00000577717 103 ntBASIC1.35□□□□□ -2.19
PRPF40BQ6NWY9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.34□□□□□ -2.19
PRPF40BQ6NWY9 MIR548L-201ENST00000408303 86 ntBASIC1.34□□□□□ -2.19
PRPF40BQ6NWY9 MIR1285-1-201ENST00000408593 84 ntBASIC1.34□□□□□ -2.19
PRPF40BQ6NWY9 RNU7-161P-201ENST00000517289 62 ntBASIC1.34□□□□□ -2.19
PRPF40BQ6NWY9 MIRLET7A1-201ENST00000362295 80 ntBASIC1.33□□□□□ -2.2
PRPF40BQ6NWY9 RNA5SP403-201ENST00000363598 108 ntBASIC1.33□□□□□ -2.2
PRPF40BQ6NWY9 RNU6-287P-201ENST00000516230 98 ntBASIC1.33□□□□□ -2.2
PRPF40BQ6NWY9 AC211469.2-201ENST00000605461 205 ntBASIC1.33□□□□□ -2.2
PRPF40BQ6NWY9 AC067863.3-201ENST00000624172 122 ntBASIC1.33□□□□□ -2.2
PRPF40BQ6NWY9 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
PRPF40BQ6NWY9 RNA5SP255-201ENST00000516370 107 ntBASIC1.32□□□□□ -2.2
PRPF40BQ6NWY9 MIR3612-201ENST00000579753 87 ntBASIC1.32□□□□□ -2.2
PRPF40BQ6NWY9 MIR4639-201ENST00000584938 69 ntBASIC1.32□□□□□ -2.2
PRPF40BQ6NWY9 Y_RNA.68-201ENST00000362881 102 ntBASIC1.31□□□□□ -2.2
PRPF40BQ6NWY9 MIR2113-201ENST00000459007 91 ntBASIC1.31□□□□□ -2.2
PRPF40BQ6NWY9 MIR3140-201ENST00000583685 90 ntBASIC1.31□□□□□ -2.2
PRPF40BQ6NWY9 RNU6-1296P-201ENST00000383879 107 ntBASIC1.3□□□□□ -2.2
PRPF40BQ6NWY9 RNU6-1052P-201ENST00000411398 104 ntBASIC1.3□□□□□ -2.2
PRPF40BQ6NWY9 RNU6-719P-201ENST00000516671 104 ntBASIC1.3□□□□□ -2.2
PRPF40BQ6NWY9 RNU6-807P-201ENST00000516805 107 ntBASIC1.3□□□□□ -2.2
PRPF40BQ6NWY9 MIR889-201ENST00000401280 79 ntBASIC1.29□□□□□ -2.2
PRPF40BQ6NWY9 AC011195.1-201ENST00000578177 177 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 299 ms