Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-1265P-201ENST00000516342 103 ntBASIC1.08□□□□□ -2.24
KRT40Q6A162 RNA5SP330-201ENST00000517096 96 ntBASIC1.08□□□□□ -2.24
KRT40Q6A162 TRDV1-202ENST00000621643 102 ntBASIC1.08□□□□□ -2.24
KRT40Q6A162 AC006160.2-201ENST00000637708 154 ntBASIC1.08□□□□□ -2.24
KRT40Q6A162 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.08□□□□□ -2.24
KRT40Q6A162 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.07□□□□□ -2.24
KRT40Q6A162 AL136317.1-201ENST00000612653 226 ntBASIC1.07□□□□□ -2.24
KRT40Q6A162 AL109933.3-201ENST00000619095 188 ntBASIC1.07□□□□□ -2.24
KRT40Q6A162 U6.100-201ENST00000636230 99 ntBASIC1.07□□□□□ -2.24
KRT40Q6A162 MIR924-201ENST00000638017 53 ntBASIC1.07□□□□□ -2.24
KRT40Q6A162 RNU4-32P-201ENST00000363404 141 ntBASIC1.06□□□□□ -2.24
KRT40Q6A162 RNA5SP62-201ENST00000363457 110 ntBASIC1.06□□□□□ -2.24
KRT40Q6A162 MIR573-201ENST00000384964 99 ntBASIC1.06□□□□□ -2.24
KRT40Q6A162 RNA5SP292-201ENST00000390974 118 ntBASIC1.06□□□□□ -2.24
KRT40Q6A162 RNU6-466P-201ENST00000391224 103 ntBASIC1.06□□□□□ -2.24
KRT40Q6A162 Y_RNA.611-201ENST00000410682 108 ntBASIC1.06□□□□□ -2.24
KRT40Q6A162 RNU7-153P-201ENST00000516455 62 ntBASIC1.06□□□□□ -2.24
KRT40Q6A162 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KRT40Q6A162 Y_RNA.221-201ENST00000364248 96 ntBASIC1.05□□□□□ -2.24
KRT40Q6A162 MIR644A-201ENST00000385262 94 ntBASIC1.05□□□□□ -2.24
KRT40Q6A162 RNA5SP121-201ENST00000516537 101 ntBASIC1.05□□□□□ -2.24
KRT40Q6A162 MIR4536-1-201ENST00000583537 88 ntBASIC1.05□□□□□ -2.24
KRT40Q6A162 Y_RNA.174-201ENST00000363781 105 ntBASIC1.04□□□□□ -2.24
KRT40Q6A162 Y_RNA.258-201ENST00000364613 105 ntBASIC1.04□□□□□ -2.24
KRT40Q6A162 RNU6-787P-201ENST00000384032 107 ntBASIC1.04□□□□□ -2.24
KRT40Q6A162 MIR519C-201ENST00000385053 87 ntBASIC1.04□□□□□ -2.24
KRT40Q6A162 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
KRT40Q6A162 MIR3064-201ENST00000581130 66 ntBASIC1.04□□□□□ -2.24
KRT40Q6A162 MIRLET7F1-201ENST00000362202 87 ntBASIC1.03□□□□□ -2.24
KRT40Q6A162 MIR532-201ENST00000385025 91 ntBASIC1.03□□□□□ -2.24
KRT40Q6A162 RNU7-171P-201ENST00000459581 62 ntBASIC1.03□□□□□ -2.24
KRT40Q6A162 RNU6-65P-201ENST00000516332 98 ntBASIC1.03□□□□□ -2.24
KRT40Q6A162 RNU7-161P-201ENST00000517289 62 ntBASIC1.03□□□□□ -2.24
KRT40Q6A162 MIR3612-201ENST00000579753 87 ntBASIC1.03□□□□□ -2.24
KRT40Q6A162 MTRNR2L2-201ENST00000604882 87 ntBASIC1.03□□□□□ -2.24
KRT40Q6A162 MIR1245B-201ENST00000636115 69 ntBASIC1.03□□□□□ -2.24
KRT40Q6A162 RNA5SP403-201ENST00000363598 108 ntBASIC1.02□□□□□ -2.25
KRT40Q6A162 RNU6-1276P-201ENST00000365372 104 ntBASIC1.02□□□□□ -2.25
KRT40Q6A162 SNORD99-201ENST00000408612 74 ntBASIC1.02□□□□□ -2.25
KRT40Q6A162 AC244098.3-201ENST00000424803 96 ntBASIC1.02□□□□□ -2.25
KRT40Q6A162 AC104996.3-201ENST00000590718 94 ntBASIC1.02□□□□□ -2.25
KRT40Q6A162 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
KRT40Q6A162 SNORD115-24-201ENST00000363528 82 ntBASIC1.01□□□□□ -2.25
KRT40Q6A162 RNU6-811P-201ENST00000384069 107 ntBASIC1.01□□□□□ -2.25
KRT40Q6A162 AC025627.3-201ENST00000582078 182 ntBASIC1.01□□□□□ -2.25
KRT40Q6A162 RNA5SP117-201ENST00000365294 118 ntBASIC1□□□□□ -2.25
KRT40Q6A162 SNORD90-201ENST00000391145 111 ntBASIC1□□□□□ -2.25
KRT40Q6A162 MIR1236-201ENST00000408340 102 ntBASIC1□□□□□ -2.25
KRT40Q6A162 MIR4696-201ENST00000581431 70 ntBASIC1□□□□□ -2.25
KRT40Q6A162 SNORD114-23-201ENST00000363536 72 ntBASIC0.99□□□□□ -2.25
KRT40Q6A162 SNORD18A-201ENST00000363753 72 ntBASIC0.99□□□□□ -2.25
KRT40Q6A162 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
KRT40Q6A162 SNORA18.5-201ENST00000516616 101 ntBASIC0.99□□□□□ -2.25
KRT40Q6A162 AC140658.3-201ENST00000567603 271 ntBASIC0.99□□□□□ -2.25
KRT40Q6A162 AC011195.1-201ENST00000578177 177 ntBASIC0.99□□□□□ -2.25
KRT40Q6A162 AC010487.4-201ENST00000637027 61 ntBASIC0.99□□□□□ -2.25
KRT40Q6A162 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KRT40Q6A162 Y_RNA.426-201ENST00000384068 113 ntBASIC0.98□□□□□ -2.25
KRT40Q6A162 RNU6-242P-201ENST00000384359 107 ntBASIC0.98□□□□□ -2.25
KRT40Q6A162 RNU6-35P-201ENST00000384530 107 ntBASIC0.98□□□□□ -2.25
KRT40Q6A162 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.98□□□□□ -2.25
KRT40Q6A162 AC093729.1-201ENST00000513074 128 ntBASIC0.98□□□□□ -2.25
KRT40Q6A162 MIR3678-201ENST00000578455 94 ntBASIC0.98□□□□□ -2.25
KRT40Q6A162 MIR6513-201ENST00000621188 64 ntBASIC0.98□□□□□ -2.25
KRT40Q6A162 RNU6-664P-201ENST00000362381 107 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 RNU6-228P-201ENST00000362700 106 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 SNORD101-201ENST00000384027 73 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 Y_RNA.491-201ENST00000384417 107 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 SNORD28-201ENST00000384706 75 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
KRT40Q6A162 MIR936-201ENST00000401264 98 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 SNORA25.13-201ENST00000516395 103 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 MIR4666B-201ENST00000578142 81 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 MIR4796-201ENST00000580742 81 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 MIR548AG2-201ENST00000581228 64 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 AL353765.1-201ENST00000605514 183 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 MIR8087-201ENST00000612745 78 ntBASIC0.97□□□□□ -2.25
KRT40Q6A162 MIR18A-201ENST00000362310 71 ntBASIC0.96□□□□□ -2.26
KRT40Q6A162 Y_RNA.219-201ENST00000364232 113 ntBASIC0.96□□□□□ -2.26
KRT40Q6A162 RNU6-716P-201ENST00000365621 103 ntBASIC0.96□□□□□ -2.26
KRT40Q6A162 Y_RNA.596-201ENST00000410462 109 ntBASIC0.96□□□□□ -2.26
KRT40Q6A162 Y_RNA.607-201ENST00000410597 98 ntBASIC0.96□□□□□ -2.26
KRT40Q6A162 Y_RNA.207-201ENST00000364142 106 ntBASIC0.95□□□□□ -2.26
KRT40Q6A162 RNU7-104P-201ENST00000459398 79 ntBASIC0.95□□□□□ -2.26
KRT40Q6A162 RNU6-351P-201ENST00000516097 100 ntBASIC0.95□□□□□ -2.26
KRT40Q6A162 RNA5SP47-201ENST00000517230 109 ntBASIC0.95□□□□□ -2.26
KRT40Q6A162 MIR3920-201ENST00000581751 86 ntBASIC0.95□□□□□ -2.26
KRT40Q6A162 MIR4639-201ENST00000584938 69 ntBASIC0.95□□□□□ -2.26
KRT40Q6A162 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.95□□□□□ -2.26
KRT40Q6A162 AC244669.1-204ENST00000621564 178 ntBASIC0.95□□□□□ -2.26
KRT40Q6A162 SNORD114-2-201ENST00000363953 78 ntBASIC0.94□□□□□ -2.26
KRT40Q6A162 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
KRT40Q6A162 Y_RNA.313-201ENST00000365095 103 ntBASIC0.94□□□□□ -2.26
KRT40Q6A162 RNU6-1124P-201ENST00000384169 107 ntBASIC0.94□□□□□ -2.26
KRT40Q6A162 MIR548U-201ENST00000390728 81 ntBASIC0.94□□□□□ -2.26
KRT40Q6A162 SNORD78.1-201ENST00000390866 65 ntBASIC0.94□□□□□ -2.26
KRT40Q6A162 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.94□□□□□ -2.26
KRT40Q6A162 RNU6-287P-201ENST00000516230 98 ntBASIC0.94□□□□□ -2.26
KRT40Q6A162 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.94□□□□□ -2.26
KRT40Q6A162 Y_RNA.316-201ENST00000365118 111 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms