Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC114801.3-201ENST00000510231 177 ntBASIC1.41□□□□□ -2.18
YBX1P67809 RNU6-719P-201ENST00000516671 104 ntBASIC1.41□□□□□ -2.18
YBX1P67809 SNORA70.22-201ENST00000517160 124 ntBASIC1.41□□□□□ -2.18
YBX1P67809 MTRNR2L2-201ENST00000604882 87 ntBASIC1.41□□□□□ -2.18
YBX1P67809 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.41□□□□□ -2.18
YBX1P67809 MIR664A-201ENST00000626086 82 ntBASIC1.41□□□□□ -2.18
YBX1P67809 Y_RNA.36-201ENST00000362602 112 ntBASIC1.4□□□□□ -2.19
YBX1P67809 SNORD114-22-201ENST00000365423 72 ntBASIC1.4□□□□□ -2.19
YBX1P67809 MIR520F-201ENST00000384824 87 ntBASIC1.4□□□□□ -2.19
YBX1P67809 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.4□□□□□ -2.19
YBX1P67809 AC074348.1-201ENST00000426503 132 ntBASIC1.4□□□□□ -2.19
YBX1P67809 AC067940.1-201ENST00000458411 300 ntBASIC1.4□□□□□ -2.19
YBX1P67809 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
YBX1P67809 RNU6-871P-201ENST00000516122 100 ntBASIC1.4□□□□□ -2.19
YBX1P67809 RNU6-1265P-201ENST00000516342 103 ntBASIC1.4□□□□□ -2.19
YBX1P67809 RNU6-1015P-201ENST00000517121 99 ntBASIC1.4□□□□□ -2.19
YBX1P67809 RNU6-1057P-201ENST00000517162 102 ntBASIC1.4□□□□□ -2.19
YBX1P67809 AC022709.1-201ENST00000615967 87 ntBASIC1.4□□□□□ -2.19
YBX1P67809 MIR6515-201ENST00000619843 57 ntBASIC1.4□□□□□ -2.19
YBX1P67809 MIR451A-201ENST00000385059 72 ntBASIC1.39□□□□□ -2.19
YBX1P67809 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
YBX1P67809 SNORA8.1-201ENST00000384250 140 ntBASIC1.38□□□□□ -2.19
YBX1P67809 MIR222-201ENST00000384992 110 ntBASIC1.38□□□□□ -2.19
YBX1P67809 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.38□□□□□ -2.19
YBX1P67809 AC244505.6-201ENST00000452829 130 ntBASIC1.38□□□□□ -2.19
YBX1P67809 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
YBX1P67809 RNU6-340P-201ENST00000364005 107 ntBASIC1.37□□□□□ -2.19
YBX1P67809 AC068338.1-201ENST00000565567 176 ntBASIC1.37□□□□□ -2.19
YBX1P67809 Y_RNA.32-201ENST00000362589 110 ntBASIC1.36□□□□□ -2.19
YBX1P67809 RNU6-330P-201ENST00000363015 107 ntBASIC1.36□□□□□ -2.19
YBX1P67809 RNU6-687P-201ENST00000516443 89 ntBASIC1.36□□□□□ -2.19
YBX1P67809 SNORA31.14-201ENST00000516728 116 ntBASIC1.36□□□□□ -2.19
YBX1P67809 MIR4421-201ENST00000578133 69 ntBASIC1.36□□□□□ -2.19
YBX1P67809 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
YBX1P67809 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
YBX1P67809 RNU6-681P-201ENST00000364012 104 ntBASIC1.35□□□□□ -2.19
YBX1P67809 RNU6-154P-201ENST00000384306 106 ntBASIC1.35□□□□□ -2.19
YBX1P67809 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
YBX1P67809 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
YBX1P67809 RNU6-587P-201ENST00000391282 106 ntBASIC1.35□□□□□ -2.19
YBX1P67809 AC097510.1-201ENST00000510945 133 ntBASIC1.35□□□□□ -2.19
YBX1P67809 RNU6-287P-201ENST00000516230 98 ntBASIC1.35□□□□□ -2.19
YBX1P67809 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.35□□□□□ -2.19
YBX1P67809 SNORD115-24-201ENST00000363528 82 ntBASIC1.34□□□□□ -2.19
YBX1P67809 MIR598-201ENST00000384868 97 ntBASIC1.34□□□□□ -2.19
YBX1P67809 SNORD12-201ENST00000391002 90 ntBASIC1.34□□□□□ -2.19
YBX1P67809 MIR1827-201ENST00000408549 66 ntBASIC1.34□□□□□ -2.19
YBX1P67809 RNU7-13P-201ENST00000516413 62 ntBASIC1.34□□□□□ -2.19
YBX1P67809 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.19
YBX1P67809 PVT1_3.1-201ENST00000620853 95 ntBASIC1.34□□□□□ -2.19
YBX1P67809 uc_338.16-201ENST00000621804 95 ntBASIC1.34□□□□□ -2.19
YBX1P67809 Y_RNA.174-201ENST00000363781 105 ntBASIC1.33□□□□□ -2.2
YBX1P67809 SNORD115-44-201ENST00000365391 82 ntBASIC1.33□□□□□ -2.2
YBX1P67809 Y_RNA.374-201ENST00000365606 101 ntBASIC1.33□□□□□ -2.2
YBX1P67809 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
YBX1P67809 MIR154-201ENST00000385243 84 ntBASIC1.33□□□□□ -2.2
YBX1P67809 MIR942-201ENST00000401111 86 ntBASIC1.33□□□□□ -2.2
YBX1P67809 RNU2-59P-201ENST00000410482 191 ntBASIC1.33□□□□□ -2.2
YBX1P67809 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
YBX1P67809 AL353770.2-201ENST00000620024 78 ntBASIC1.33□□□□□ -2.2
YBX1P67809 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
YBX1P67809 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
YBX1P67809 SNORA24B-201ENST00000384176 131 ntBASIC1.32□□□□□ -2.2
YBX1P67809 Y_RNA.606-201ENST00000410579 103 ntBASIC1.32□□□□□ -2.2
YBX1P67809 RNU6-634P-201ENST00000459134 106 ntBASIC1.32□□□□□ -2.2
YBX1P67809 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.32□□□□□ -2.2
YBX1P67809 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.32□□□□□ -2.2
YBX1P67809 RNU6-824P-201ENST00000363724 104 ntBASIC1.31□□□□□ -2.2
YBX1P67809 RNU6-590P-201ENST00000365039 107 ntBASIC1.31□□□□□ -2.2
YBX1P67809 RNU6-1241P-201ENST00000384536 107 ntBASIC1.31□□□□□ -2.2
YBX1P67809 RNU6-997P-201ENST00000384725 107 ntBASIC1.31□□□□□ -2.2
YBX1P67809 MIR2113-201ENST00000459007 91 ntBASIC1.31□□□□□ -2.2
YBX1P67809 RNU6-539P-201ENST00000516665 103 ntBASIC1.31□□□□□ -2.2
YBX1P67809 MIR6078-201ENST00000611069 100 ntBASIC1.31□□□□□ -2.2
YBX1P67809 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
YBX1P67809 SNORD89-201ENST00000390981 114 ntBASIC1.3□□□□□ -2.2
YBX1P67809 RNU6-1177P-201ENST00000391058 104 ntBASIC1.3□□□□□ -2.2
YBX1P67809 U3.27-201ENST00000391237 200 ntBASIC1.3□□□□□ -2.2
YBX1P67809 RNU7-104P-201ENST00000459398 79 ntBASIC1.3□□□□□ -2.2
YBX1P67809 RNU6-1223P-201ENST00000517124 104 ntBASIC1.3□□□□□ -2.2
YBX1P67809 MIR3675-201ENST00000583661 73 ntBASIC1.3□□□□□ -2.2
YBX1P67809 U6.81-201ENST00000612550 106 ntBASIC1.3□□□□□ -2.2
YBX1P67809 AL136317.1-201ENST00000612653 226 ntBASIC1.3□□□□□ -2.2
YBX1P67809 MIR4773-1-201ENST00000637203 78 ntBASIC1.3□□□□□ -2.2
YBX1P67809 RNA5SP327-201ENST00000362494 101 ntBASIC1.29□□□□□ -2.2
YBX1P67809 RNA5SP403-201ENST00000363598 108 ntBASIC1.29□□□□□ -2.2
YBX1P67809 RNA5SP117-201ENST00000365294 118 ntBASIC1.29□□□□□ -2.2
YBX1P67809 SNORA25-201ENST00000384384 134 ntBASIC1.29□□□□□ -2.2
YBX1P67809 RNU6-649P-201ENST00000384463 107 ntBASIC1.29□□□□□ -2.2
YBX1P67809 RNU7-161P-201ENST00000517289 62 ntBASIC1.29□□□□□ -2.2
YBX1P67809 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.29□□□□□ -2.2
YBX1P67809 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
YBX1P67809 SNORD30.1-201ENST00000391309 70 ntBASIC1.28□□□□□ -2.2
YBX1P67809 MIR3920-201ENST00000581751 86 ntBASIC1.28□□□□□ -2.2
YBX1P67809 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
YBX1P67809 Y_RNA.205-201ENST00000364128 113 ntBASIC1.27□□□□□ -2.21
YBX1P67809 MIR644A-201ENST00000385262 94 ntBASIC1.27□□□□□ -2.21
YBX1P67809 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.27□□□□□ -2.21
YBX1P67809 AC002350.1-201ENST00000490759 375 ntBASIC1.27□□□□□ -2.21
YBX1P67809 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms