Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 Y_RNA.224-201ENST00000364308 111 ntBASIC0.94□□□□□ -2.26
GFRA1P56159 Y_RNA.388-201ENST00000383919 113 ntBASIC0.94□□□□□ -2.26
GFRA1P56159 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
GFRA1P56159 MIR1285-1-201ENST00000408593 84 ntBASIC0.94□□□□□ -2.26
GFRA1P56159 SNORA18.5-201ENST00000516616 101 ntBASIC0.94□□□□□ -2.26
GFRA1P56159 AC211469.2-201ENST00000605461 205 ntBASIC0.94□□□□□ -2.26
GFRA1P56159 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
GFRA1P56159 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.94□□□□□ -2.26
GFRA1P56159 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
GFRA1P56159 AC006160.2-201ENST00000637708 154 ntBASIC0.94□□□□□ -2.26
GFRA1P56159 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
GFRA1P56159 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
GFRA1P56159 Y_RNA.207-201ENST00000364142 106 ntBASIC0.93□□□□□ -2.26
GFRA1P56159 RNU1-93P-201ENST00000364704 169 ntBASIC0.93□□□□□ -2.26
GFRA1P56159 RNU6-979P-201ENST00000383896 107 ntBASIC0.93□□□□□ -2.26
GFRA1P56159 RNU7-74P-201ENST00000459104 62 ntBASIC0.93□□□□□ -2.26
GFRA1P56159 RNU6-287P-201ENST00000516230 98 ntBASIC0.93□□□□□ -2.26
GFRA1P56159 RNU7-153P-201ENST00000516455 62 ntBASIC0.93□□□□□ -2.26
GFRA1P56159 RNA5SP94-201ENST00000516917 108 ntBASIC0.93□□□□□ -2.26
GFRA1P56159 MIR3920-201ENST00000581751 86 ntBASIC0.93□□□□□ -2.26
GFRA1P56159 RNU6-1126P-201ENST00000384002 107 ntBASIC0.92□□□□□ -2.26
GFRA1P56159 RNU6-110P-201ENST00000384508 104 ntBASIC0.92□□□□□ -2.26
GFRA1P56159 RNU6-1152P-201ENST00000384576 107 ntBASIC0.92□□□□□ -2.26
GFRA1P56159 RNA5SP227-201ENST00000516184 113 ntBASIC0.92□□□□□ -2.26
GFRA1P56159 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
GFRA1P56159 RNU6-1276P-201ENST00000365372 104 ntBASIC0.91□□□□□ -2.26
GFRA1P56159 RNU6-716P-201ENST00000365621 103 ntBASIC0.91□□□□□ -2.26
GFRA1P56159 MIR140-201ENST00000385282 100 ntBASIC0.91□□□□□ -2.26
GFRA1P56159 MIR4452-201ENST00000583004 71 ntBASIC0.91□□□□□ -2.26
GFRA1P56159 RNU6-726P-201ENST00000364680 107 ntBASIC0.9□□□□□ -2.27
GFRA1P56159 RNA5SP173-201ENST00000364857 136 ntBASIC0.9□□□□□ -2.27
GFRA1P56159 SNORD114-22-201ENST00000365423 72 ntBASIC0.9□□□□□ -2.27
GFRA1P56159 SNORD41.1-201ENST00000391000 69 ntBASIC0.9□□□□□ -2.27
GFRA1P56159 Y_RNA.607-201ENST00000410597 98 ntBASIC0.9□□□□□ -2.27
GFRA1P56159 MIR2113-201ENST00000459007 91 ntBASIC0.9□□□□□ -2.27
GFRA1P56159 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
GFRA1P56159 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.9□□□□□ -2.27
GFRA1P56159 MIR6828-201ENST00000636181 60 ntBASIC0.9□□□□□ -2.27
GFRA1P56159 RNY4P3-201ENST00000365254 95 ntBASIC0.89□□□□□ -2.27
GFRA1P56159 MIR617-201ENST00000385030 97 ntBASIC0.89□□□□□ -2.27
GFRA1P56159 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
GFRA1P56159 RNU7-171P-201ENST00000459581 62 ntBASIC0.89□□□□□ -2.27
GFRA1P56159 SNORA25.13-201ENST00000516395 103 ntBASIC0.89□□□□□ -2.27
GFRA1P56159 RNA5SP268-201ENST00000516828 124 ntBASIC0.89□□□□□ -2.27
GFRA1P56159 RNY1P8-201ENST00000383970 114 ntBASIC0.88□□□□□ -2.27
GFRA1P56159 MIR451A-201ENST00000385059 72 ntBASIC0.88□□□□□ -2.27
GFRA1P56159 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
GFRA1P56159 MIR216B-201ENST00000390186 82 ntBASIC0.87□□□□□ -2.27
GFRA1P56159 RNU6-592P-201ENST00000411333 103 ntBASIC0.87□□□□□ -2.27
GFRA1P56159 AC140658.3-201ENST00000567603 271 ntBASIC0.87□□□□□ -2.27
GFRA1P56159 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
GFRA1P56159 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
GFRA1P56159 RNU5F-1-201ENST00000362507 117 ntBASIC0.86□□□□□ -2.27
GFRA1P56159 SNORA36.1-201ENST00000363424 132 ntBASIC0.86□□□□□ -2.27
GFRA1P56159 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
GFRA1P56159 MIR548AG2-201ENST00000581228 64 ntBASIC0.86□□□□□ -2.27
GFRA1P56159 AL078603.1-201ENST00000603824 313 ntBASIC0.86□□□□□ -2.27
GFRA1P56159 AC092634.7-201ENST00000621022 103 ntBASIC0.86□□□□□ -2.27
GFRA1P56159 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
GFRA1P56159 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
GFRA1P56159 RNU6-1051P-201ENST00000365471 102 ntBASIC0.85□□□□□ -2.27
GFRA1P56159 U3.27-201ENST00000391237 200 ntBASIC0.85□□□□□ -2.27
GFRA1P56159 FGF7P7-201ENST00000514120 227 ntBASIC0.85□□□□□ -2.27
GFRA1P56159 RNU6-573P-201ENST00000383938 106 ntBASIC0.84□□□□□ -2.27
GFRA1P56159 SNORA8.2-201ENST00000384372 139 ntBASIC0.84□□□□□ -2.27
GFRA1P56159 MIR520E-201ENST00000384867 87 ntBASIC0.84□□□□□ -2.27
GFRA1P56159 MIR519E-201ENST00000385075 84 ntBASIC0.84□□□□□ -2.27
GFRA1P56159 AC103810.9-201ENST00000606688 112 ntBASIC0.84□□□□□ -2.27
GFRA1P56159 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
GFRA1P56159 SNORA63.2-201ENST00000362603 126 ntBASIC0.83□□□□□ -2.28
GFRA1P56159 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
GFRA1P56159 AL590095.2-201ENST00000604136 117 ntBASIC0.83□□□□□ -2.28
GFRA1P56159 MIR3202-2-201ENST00000635980 79 ntBASIC0.83□□□□□ -2.28
GFRA1P56159 Y_RNA.219-201ENST00000364232 113 ntBASIC0.82□□□□□ -2.28
GFRA1P56159 RNA5SP517-201ENST00000364724 117 ntBASIC0.82□□□□□ -2.28
GFRA1P56159 Y_RNA.437-201ENST00000384113 113 ntBASIC0.82□□□□□ -2.28
GFRA1P56159 SNORD71-201ENST00000411292 86 ntBASIC0.82□□□□□ -2.28
GFRA1P56159 RNA5SP220-201ENST00000516298 104 ntBASIC0.82□□□□□ -2.28
GFRA1P56159 MIR7107-201ENST00000611489 80 ntBASIC0.82□□□□□ -2.28
GFRA1P56159 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
GFRA1P56159 MIR4666B-201ENST00000578142 81 ntBASIC0.81□□□□□ -2.28
GFRA1P56159 MIR6734-201ENST00000621166 68 ntBASIC0.81□□□□□ -2.28
GFRA1P56159 AL162376.1-201ENST00000624117 175 ntBASIC0.81□□□□□ -2.28
GFRA1P56159 RNU6-624P-201ENST00000363411 107 ntBASIC0.8□□□□□ -2.28
GFRA1P56159 RNU6-42P-201ENST00000384165 107 ntBASIC0.8□□□□□ -2.28
GFRA1P56159 RNU6-269P-201ENST00000391077 97 ntBASIC0.8□□□□□ -2.28
GFRA1P56159 RPS29P1-201ENST00000465274 159 ntBASIC0.8□□□□□ -2.28
GFRA1P56159 Y_RNA.118-201ENST00000363300 101 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 Y_RNA.316-201ENST00000365118 111 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 Y_RNA.355-201ENST00000365462 98 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 SNORD90-201ENST00000391145 111 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 SNORA40.8-201ENST00000411034 126 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 RNU6-1052P-201ENST00000411398 104 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 Y_RNA.660-201ENST00000516002 120 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 RNU6-719P-201ENST00000516671 104 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 MIR3140-201ENST00000583685 90 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 MIR1245B-201ENST00000636115 69 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 AC073869.9-201ENST00000641610 120 ntBASIC0.79□□□□□ -2.28
GFRA1P56159 RNU6-129P-201ENST00000391022 107 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms