Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SNORD36A-201ENST00000362874 73 ntBASIC0.18□□□□□ -2.38
LBX1P52954 RNU6-161P-201ENST00000363051 106 ntBASIC0.18□□□□□ -2.38
LBX1P52954 Y_RNA.221-201ENST00000364248 96 ntBASIC0.18□□□□□ -2.38
LBX1P52954 MIR516A2-201ENST00000384888 90 ntBASIC0.18□□□□□ -2.38
LBX1P52954 MIR516A1-201ENST00000385033 90 ntBASIC0.18□□□□□ -2.38
LBX1P52954 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.18□□□□□ -2.38
LBX1P52954 Y_RNA.649-201ENST00000459077 103 ntBASIC0.18□□□□□ -2.38
LBX1P52954 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.18□□□□□ -2.38
LBX1P52954 RNU6-782P-201ENST00000516852 104 ntBASIC0.18□□□□□ -2.38
LBX1P52954 MTND5P40-201ENST00000559945 246 ntBASIC0.18□□□□□ -2.38
LBX1P52954 Y_RNA.155-201ENST00000363632 101 ntBASIC0.17□□□□□ -2.38
LBX1P52954 Y_RNA.281-201ENST00000364774 94 ntBASIC0.17□□□□□ -2.38
LBX1P52954 Y_RNA.309-201ENST00000365046 111 ntBASIC0.17□□□□□ -2.38
LBX1P52954 Y_RNA.583-201ENST00000391033 113 ntBASIC0.17□□□□□ -2.38
LBX1P52954 RNU6-269P-201ENST00000391077 97 ntBASIC0.17□□□□□ -2.38
LBX1P52954 MIR5706-201ENST00000579841 80 ntBASIC0.17□□□□□ -2.38
LBX1P52954 MIR548AG2-201ENST00000581228 64 ntBASIC0.17□□□□□ -2.38
LBX1P52954 SNORA70.25-201ENST00000612741 95 ntBASIC0.17□□□□□ -2.38
LBX1P52954 SNORD113-1-201ENST00000365321 69 ntBASIC0.16□□□□□ -2.38
LBX1P52954 RNU6-524P-201ENST00000384270 107 ntBASIC0.16□□□□□ -2.38
LBX1P52954 MIR548H2-201ENST00000408874 88 ntBASIC0.16□□□□□ -2.38
LBX1P52954 AC141557.1-201ENST00000540982 400 ntBASIC0.16□□□□□ -2.38
LBX1P52954 AL512310.12-203ENST00000640543 90 ntBASIC0.16□□□□□ -2.38
LBX1P52954 AC073869.9-201ENST00000641610 120 ntBASIC0.16□□□□□ -2.38
LBX1P52954 RNU6-1244P-201ENST00000363614 108 ntBASIC0.15□□□□□ -2.39
LBX1P52954 RNU6-1163P-201ENST00000364516 107 ntBASIC0.15□□□□□ -2.39
LBX1P52954 U8.6-201ENST00000364939 135 ntBASIC0.15□□□□□ -2.39
LBX1P52954 RNA5SP128-201ENST00000365305 116 ntBASIC0.15□□□□□ -2.39
LBX1P52954 MIR501-201ENST00000390204 84 ntBASIC0.15□□□□□ -2.39
LBX1P52954 RNU6-1254P-201ENST00000391266 104 ntBASIC0.15□□□□□ -2.39
LBX1P52954 RNU4-63P-201ENST00000411313 118 ntBASIC0.15□□□□□ -2.39
LBX1P52954 AC093423.1-201ENST00000440817 142 ntBASIC0.15□□□□□ -2.39
LBX1P52954 TMSB4XP3-201ENST00000445144 114 ntBASIC0.15□□□□□ -2.39
LBX1P52954 RNU6-1333P-201ENST00000516162 93 ntBASIC0.15□□□□□ -2.39
LBX1P52954 RNU6-1232P-201ENST00000516299 86 ntBASIC0.15□□□□□ -2.39
LBX1P52954 AC068339.1-201ENST00000526965 141 ntBASIC0.15□□□□□ -2.39
LBX1P52954 MIR3613-201ENST00000579844 87 ntBASIC0.15□□□□□ -2.39
LBX1P52954 AL670379.3-201ENST00000605040 251 ntBASIC0.15□□□□□ -2.39
LBX1P52954 RNY3P2-201ENST00000362918 102 ntBASIC0.14□□□□□ -2.39
LBX1P52954 RNU6-832P-201ENST00000363319 107 ntBASIC0.14□□□□□ -2.39
LBX1P52954 Y_RNA.423-201ENST00000384057 113 ntBASIC0.14□□□□□ -2.39
LBX1P52954 MIR760-201ENST00000390220 80 ntBASIC0.14□□□□□ -2.39
LBX1P52954 RNU6-127P-201ENST00000390897 107 ntBASIC0.14□□□□□ -2.39
LBX1P52954 MIR548M-201ENST00000408260 86 ntBASIC0.14□□□□□ -2.39
LBX1P52954 RNU6-90P-201ENST00000606352 106 ntBASIC0.14□□□□□ -2.39
LBX1P52954 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.14□□□□□ -2.39
LBX1P52954 MIR4320-201ENST00000636981 65 ntBASIC0.14□□□□□ -2.39
LBX1P52954 Y_RNA.57-201ENST00000362806 113 ntBASIC0.13□□□□□ -2.39
LBX1P52954 SNORD114-28-201ENST00000363610 72 ntBASIC0.13□□□□□ -2.39
LBX1P52954 RNU7-13P-201ENST00000516413 62 ntBASIC0.13□□□□□ -2.39
LBX1P52954 MIR548AD-201ENST00000584780 82 ntBASIC0.13□□□□□ -2.39
LBX1P52954 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.13□□□□□ -2.39
LBX1P52954 SNORD115-44-201ENST00000365391 82 ntBASIC0.12□□□□□ -2.39
LBX1P52954 MIR214-201ENST00000385214 110 ntBASIC0.12□□□□□ -2.39
LBX1P52954 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
LBX1P52954 SPINT5P-201ENST00000448174 155 ntBASIC0.12□□□□□ -2.39
LBX1P52954 MIR5009-201ENST00000578736 100 ntBASIC0.12□□□□□ -2.39
LBX1P52954 MIR8064-201ENST00000612863 90 ntBASIC0.12□□□□□ -2.39
LBX1P52954 SNORD114-16-201ENST00000363044 70 ntBASIC0.11□□□□□ -2.39
LBX1P52954 RNU6-880P-201ENST00000384526 107 ntBASIC0.11□□□□□ -2.39
LBX1P52954 MIR548A3-201ENST00000385297 97 ntBASIC0.11□□□□□ -2.39
LBX1P52954 MIR548L-201ENST00000408303 86 ntBASIC0.11□□□□□ -2.39
LBX1P52954 AC008267.6-201ENST00000441664 139 ntBASIC0.11□□□□□ -2.39
LBX1P52954 TRDV1-202ENST00000621643 102 ntBASIC0.11□□□□□ -2.39
LBX1P52954 U6.100-201ENST00000636230 99 ntBASIC0.11□□□□□ -2.39
LBX1P52954 Y_RNA.261-201ENST00000364631 102 ntBASIC0.1□□□□□ -2.39
LBX1P52954 MIR617-201ENST00000385030 97 ntBASIC0.1□□□□□ -2.39
LBX1P52954 MIR548A1-201ENST00000385041 97 ntBASIC0.1□□□□□ -2.39
LBX1P52954 MIR519E-201ENST00000385075 84 ntBASIC0.1□□□□□ -2.39
LBX1P52954 RNA5SP484-201ENST00000458857 111 ntBASIC0.1□□□□□ -2.39
LBX1P52954 RNU7-129P-201ENST00000516128 62 ntBASIC0.1□□□□□ -2.39
LBX1P52954 Y_RNA.78-201ENST00000362970 110 ntBASIC0.09□□□□□ -2.4
LBX1P52954 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
LBX1P52954 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.09□□□□□ -2.4
LBX1P52954 MIR3910-1-201ENST00000580936 111 ntBASIC0.09□□□□□ -2.4
LBX1P52954 MIR4439-201ENST00000583746 80 ntBASIC0.09□□□□□ -2.4
LBX1P52954 AL365222.1-201ENST00000614661 98 ntBASIC0.09□□□□□ -2.4
LBX1P52954 RNU6-509P-201ENST00000363519 107 ntBASIC0.08□□□□□ -2.4
LBX1P52954 RNU6-1168P-201ENST00000390831 104 ntBASIC0.08□□□□□ -2.4
LBX1P52954 RNU6-243P-201ENST00000391140 107 ntBASIC0.08□□□□□ -2.4
LBX1P52954 RNU7-74P-201ENST00000459104 62 ntBASIC0.08□□□□□ -2.4
LBX1P52954 MIR4743-201ENST00000584576 69 ntBASIC0.08□□□□□ -2.4
LBX1P52954 RNU6-1216P-201ENST00000362590 107 ntBASIC0.07□□□□□ -2.4
LBX1P52954 RNU6-957P-201ENST00000363652 99 ntBASIC0.07□□□□□ -2.4
LBX1P52954 Y_RNA.228-201ENST00000364346 98 ntBASIC0.07□□□□□ -2.4
LBX1P52954 RNU6-1144P-201ENST00000384247 104 ntBASIC0.07□□□□□ -2.4
LBX1P52954 AL161932.1-201ENST00000437408 146 ntBASIC0.07□□□□□ -2.4
LBX1P52954 MIR2113-201ENST00000459007 91 ntBASIC0.07□□□□□ -2.4
LBX1P52954 MIR4677-201ENST00000584153 80 ntBASIC0.07□□□□□ -2.4
LBX1P52954 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.07□□□□□ -2.4
LBX1P52954 Y_RNA.55-201ENST00000362797 102 ntBASIC0.06□□□□□ -2.4
LBX1P52954 Y_RNA.125-201ENST00000363371 111 ntBASIC0.06□□□□□ -2.4
LBX1P52954 RNU1-141P-201ENST00000364623 158 ntBASIC0.06□□□□□ -2.4
LBX1P52954 SNORD116-21-201ENST00000384507 92 ntBASIC0.06□□□□□ -2.4
LBX1P52954 AL603908.1-201ENST00000406098 201 ntBASIC0.06□□□□□ -2.4
LBX1P52954 Y_RNA.648-201ENST00000459455 110 ntBASIC0.06□□□□□ -2.4
LBX1P52954 RNU6-75P-201ENST00000515944 104 ntBASIC0.06□□□□□ -2.4
LBX1P52954 NAMPTP3-201ENST00000569273 224 ntBASIC0.06□□□□□ -2.4
LBX1P52954 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
LBX1P52954 MIR3681-201ENST00000580089 72 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms