Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 BX248123.2-201ENST00000606318 124 ntBASIC2.3□□□□□ -2.04
PRIM1P49642 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.29□□□□□ -2.04
PRIM1P49642 AC244098.3-201ENST00000424803 96 ntBASIC2.29□□□□□ -2.04
PRIM1P49642 AC008834.1-201ENST00000511612 175 ntBASIC2.29□□□□□ -2.04
PRIM1P49642 RNU6-135P-201ENST00000516769 101 ntBASIC2.29□□□□□ -2.04
PRIM1P49642 MIR502-201ENST00000606349 86 ntBASIC2.29□□□□□ -2.04
PRIM1P49642 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
PRIM1P49642 MIR1-1-201ENST00000362147 71 ntBASIC2.28□□□□□ -2.04
PRIM1P49642 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
PRIM1P49642 SNORD113.1-201ENST00000363280 73 ntBASIC2.27□□□□□ -2.05
PRIM1P49642 RNA5SP245-201ENST00000364239 121 ntBASIC2.27□□□□□ -2.05
PRIM1P49642 MIR489-201ENST00000384923 84 ntBASIC2.27□□□□□ -2.05
PRIM1P49642 SNORD75.2-201ENST00000408784 58 ntBASIC2.27□□□□□ -2.05
PRIM1P49642 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PRIM1P49642 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.26□□□□□ -2.05
PRIM1P49642 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.26□□□□□ -2.05
PRIM1P49642 HMGN2P19-201ENST00000425149 265 ntBASIC2.26□□□□□ -2.05
PRIM1P49642 RNU7-56P-201ENST00000458744 62 ntBASIC2.26□□□□□ -2.05
PRIM1P49642 MIR2113-201ENST00000459007 91 ntBASIC2.26□□□□□ -2.05
PRIM1P49642 RNU7-74P-201ENST00000459104 62 ntBASIC2.26□□□□□ -2.05
PRIM1P49642 AC023827.1-201ENST00000569247 97 ntBASIC2.26□□□□□ -2.05
PRIM1P49642 MIR4511-201ENST00000582784 87 ntBASIC2.26□□□□□ -2.05
PRIM1P49642 AL096840.1-201ENST00000603287 93 ntBASIC2.26□□□□□ -2.05
PRIM1P49642 AL078603.1-201ENST00000603824 313 ntBASIC2.26□□□□□ -2.05
PRIM1P49642 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PRIM1P49642 RNU6-382P-201ENST00000365181 106 ntBASIC2.25□□□□□ -2.05
PRIM1P49642 MIR100-201ENST00000385259 80 ntBASIC2.25□□□□□ -2.05
PRIM1P49642 SNORD12-201ENST00000391002 90 ntBASIC2.25□□□□□ -2.05
PRIM1P49642 AL691482.2-201ENST00000457453 84 ntBASIC2.25□□□□□ -2.05
PRIM1P49642 RNU6-902P-201ENST00000517212 91 ntBASIC2.25□□□□□ -2.05
PRIM1P49642 AC069503.3-201ENST00000618674 145 ntBASIC2.25□□□□□ -2.05
PRIM1P49642 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PRIM1P49642 SNORA16.1-201ENST00000364597 132 ntBASIC2.24□□□□□ -2.05
PRIM1P49642 RNU6-604P-201ENST00000390917 100 ntBASIC2.24□□□□□ -2.05
PRIM1P49642 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.24□□□□□ -2.05
PRIM1P49642 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.24□□□□□ -2.05
PRIM1P49642 RNA5SP403-201ENST00000363598 108 ntBASIC2.23□□□□□ -2.05
PRIM1P49642 RNU6-1126P-201ENST00000384002 107 ntBASIC2.23□□□□□ -2.05
PRIM1P49642 MIR617-201ENST00000385030 97 ntBASIC2.23□□□□□ -2.05
PRIM1P49642 MTND4LP1-201ENST00000446263 157 ntBASIC2.23□□□□□ -2.05
PRIM1P49642 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PRIM1P49642 SNORD115-24-201ENST00000363528 82 ntBASIC2.22□□□□□ -2.05
PRIM1P49642 MIR934-201ENST00000401241 83 ntBASIC2.22□□□□□ -2.05
PRIM1P49642 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PRIM1P49642 RNU6-669P-201ENST00000365575 107 ntBASIC2.21□□□□□ -2.06
PRIM1P49642 RNU6-499P-201ENST00000365615 107 ntBASIC2.21□□□□□ -2.06
PRIM1P49642 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.21□□□□□ -2.06
PRIM1P49642 SNORD79.1-201ENST00000516069 84 ntBASIC2.21□□□□□ -2.06
PRIM1P49642 uc_338.16-201ENST00000621804 95 ntBASIC2.21□□□□□ -2.06
PRIM1P49642 Y_RNA.327-201ENST00000365201 102 ntBASIC2.2□□□□□ -2.06
PRIM1P49642 RNU6-910P-201ENST00000390844 107 ntBASIC2.2□□□□□ -2.06
PRIM1P49642 AC012493.3-201ENST00000604494 112 ntBASIC2.2□□□□□ -2.06
PRIM1P49642 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PRIM1P49642 RNU1-42P-201ENST00000364033 160 ntBASIC2.19□□□□□ -2.06
PRIM1P49642 Y_RNA.363-201ENST00000365529 113 ntBASIC2.19□□□□□ -2.06
PRIM1P49642 RNU6-987P-201ENST00000384759 104 ntBASIC2.19□□□□□ -2.06
PRIM1P49642 MIR1276-201ENST00000408707 83 ntBASIC2.19□□□□□ -2.06
PRIM1P49642 AL136317.1-201ENST00000612653 226 ntBASIC2.19□□□□□ -2.06
PRIM1P49642 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PRIM1P49642 RNU6-495P-201ENST00000362995 107 ntBASIC2.18□□□□□ -2.06
PRIM1P49642 SNORD116-24-201ENST00000384549 92 ntBASIC2.18□□□□□ -2.06
PRIM1P49642 MTND4LP19-201ENST00000403051 166 ntBASIC2.18□□□□□ -2.06
PRIM1P49642 SNORA31.14-201ENST00000516728 116 ntBASIC2.18□□□□□ -2.06
PRIM1P49642 MIR4419B-201ENST00000577260 68 ntBASIC2.18□□□□□ -2.06
PRIM1P49642 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRIM1P49642 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PRIM1P49642 RNU6-369P-201ENST00000362515 102 ntBASIC2.17□□□□□ -2.06
PRIM1P49642 MIR520F-201ENST00000384824 87 ntBASIC2.17□□□□□ -2.06
PRIM1P49642 MIR1827-201ENST00000408549 66 ntBASIC2.17□□□□□ -2.06
PRIM1P49642 MIR3920-201ENST00000581751 86 ntBASIC2.17□□□□□ -2.06
PRIM1P49642 AC067863.3-201ENST00000624172 122 ntBASIC2.17□□□□□ -2.06
PRIM1P49642 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
PRIM1P49642 Y_RNA.32-201ENST00000362589 110 ntBASIC2.16□□□□□ -2.06
PRIM1P49642 RNU6-392P-201ENST00000364926 101 ntBASIC2.16□□□□□ -2.06
PRIM1P49642 SNORD48-201ENST00000364953 64 ntBASIC2.16□□□□□ -2.06
PRIM1P49642 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.16□□□□□ -2.06
PRIM1P49642 SNORA70.22-201ENST00000517160 124 ntBASIC2.16□□□□□ -2.06
PRIM1P49642 Y_RNA.224-201ENST00000364308 111 ntBASIC2.15□□□□□ -2.07
PRIM1P49642 Y_RNA.258-201ENST00000364613 105 ntBASIC2.15□□□□□ -2.07
PRIM1P49642 RNU6-1039P-201ENST00000383931 107 ntBASIC2.15□□□□□ -2.07
PRIM1P49642 MIR548O2-201ENST00000616090 70 ntBASIC2.15□□□□□ -2.07
PRIM1P49642 MIR7-2-201ENST00000384970 110 ntBASIC2.14□□□□□ -2.07
PRIM1P49642 RNU4-37P-201ENST00000410214 84 ntBASIC2.14□□□□□ -2.07
PRIM1P49642 snoU13.18-201ENST00000459483 104 ntBASIC2.14□□□□□ -2.07
PRIM1P49642 AC073869.9-201ENST00000641610 120 ntBASIC2.14□□□□□ -2.07
PRIM1P49642 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PRIM1P49642 RNA5SP117-201ENST00000365294 118 ntBASIC2.13□□□□□ -2.07
PRIM1P49642 RNU7-161P-201ENST00000517289 62 ntBASIC2.13□□□□□ -2.07
PRIM1P49642 SNORD53B-201ENST00000577887 78 ntBASIC2.13□□□□□ -2.07
PRIM1P49642 MIR6504-201ENST00000613520 61 ntBASIC2.13□□□□□ -2.07
PRIM1P49642 MIR6509-201ENST00000614603 85 ntBASIC2.13□□□□□ -2.07
PRIM1P49642 AL157834.3-201ENST00000615543 103 ntBASIC2.13□□□□□ -2.07
PRIM1P49642 RNU6-668P-201ENST00000364180 107 ntBASIC2.12□□□□□ -2.07
PRIM1P49642 RNU7-104P-201ENST00000459398 79 ntBASIC2.12□□□□□ -2.07
PRIM1P49642 RNU6-469P-201ENST00000516253 101 ntBASIC2.12□□□□□ -2.07
PRIM1P49642 MIR9-2-201ENST00000384838 87 ntBASIC2.11□□□□□ -2.07
PRIM1P49642 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.11□□□□□ -2.07
PRIM1P49642 AC110620.1-201ENST00000416042 228 ntBASIC2.11□□□□□ -2.07
PRIM1P49642 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.11□□□□□ -2.07
PRIM1P49642 MIR676-201ENST00000390702 67 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms