Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MIR548A1-201ENST00000385041 97 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 MIR1277-201ENST00000408536 78 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 MIR548H1-201ENST00000408610 102 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 RNU6-718P-201ENST00000516166 105 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 SNORA40.15-201ENST00000516884 107 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 CYP3A54P-201ENST00000566950 75 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 MIR4536-1-201ENST00000583537 88 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 AL137067.1-201ENST00000615933 120 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.53□□□□□ -2.81
SRP9P49458 SNORA63.2-201ENST00000362603 126 ntBASIC-2.54□□□□□ -2.82
SRP9P49458 RNU6-818P-201ENST00000364837 108 ntBASIC-2.54□□□□□ -2.82
SRP9P49458 MT-TI-201ENST00000387365 69 ntBASIC-2.54□□□□□ -2.82
SRP9P49458 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.54□□□□□ -2.82
SRP9P49458 RPL35AP4-201ENST00000412007 102 ntBASIC-2.54□□□□□ -2.82
SRP9P49458 Z83846.1-201ENST00000446798 265 ntBASIC-2.54□□□□□ -2.82
SRP9P49458 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.54□□□□□ -2.82
SRP9P49458 MIR4490-201ENST00000582647 84 ntBASIC-2.54□□□□□ -2.82
SRP9P49458 AC021753.1-201ENST00000635724 168 ntBASIC-2.54□□□□□ -2.82
SRP9P49458 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.55□□□□□ -2.82
SRP9P49458 RNU6-450P-201ENST00000364654 107 ntBASIC-2.55□□□□□ -2.82
SRP9P49458 RNU6-806P-201ENST00000365147 105 ntBASIC-2.55□□□□□ -2.82
SRP9P49458 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.55□□□□□ -2.82
SRP9P49458 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.55□□□□□ -2.82
SRP9P49458 SNORD75.2-201ENST00000408784 58 ntBASIC-2.55□□□□□ -2.82
SRP9P49458 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.55□□□□□ -2.82
SRP9P49458 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.55□□□□□ -2.82
SRP9P49458 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.55□□□□□ -2.82
SRP9P49458 Y_RNA.804-201ENST00000615262 101 ntBASIC-2.55□□□□□ -2.82
SRP9P49458 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.56□□□□□ -2.82
SRP9P49458 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.56□□□□□ -2.82
SRP9P49458 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.56□□□□□ -2.82
SRP9P49458 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.56□□□□□ -2.82
SRP9P49458 snoU13.17-201ENST00000458802 104 ntBASIC-2.56□□□□□ -2.82
SRP9P49458 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.56□□□□□ -2.82
SRP9P49458 RNU6-976P-201ENST00000516086 111 ntBASIC-2.56□□□□□ -2.82
SRP9P49458 RNY3P15-201ENST00000516297 97 ntBASIC-2.56□□□□□ -2.82
SRP9P49458 AP002795.1-201ENST00000534879 84 ntBASIC-2.56□□□□□ -2.82
SRP9P49458 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.57□□□□□ -2.82
SRP9P49458 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.57□□□□□ -2.82
SRP9P49458 SNORD116-1-201ENST00000384335 95 ntBASIC-2.57□□□□□ -2.82
SRP9P49458 RNA5SP86-201ENST00000390869 98 ntBASIC-2.57□□□□□ -2.82
SRP9P49458 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.57□□□□□ -2.82
SRP9P49458 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.57□□□□□ -2.82
SRP9P49458 MTND5P22-201ENST00000458380 195 ntBASIC-2.57□□□□□ -2.82
SRP9P49458 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.57□□□□□ -2.82
SRP9P49458 U4.5-201ENST00000617137 123 ntBASIC-2.57□□□□□ -2.82
SRP9P49458 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.58□□□□□ -2.82
SRP9P49458 RNU6-770P-201ENST00000363929 105 ntBASIC-2.58□□□□□ -2.82
SRP9P49458 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.58□□□□□ -2.82
SRP9P49458 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.58□□□□□ -2.82
SRP9P49458 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.58□□□□□ -2.82
SRP9P49458 ELOCP20-201ENST00000422460 345 ntBASIC-2.58□□□□□ -2.82
SRP9P49458 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.58□□□□□ -2.82
SRP9P49458 RNU7-24P-201ENST00000458867 62 ntBASIC-2.58□□□□□ -2.82
SRP9P49458 MIR3163-201ENST00000581592 73 ntBASIC-2.58□□□□□ -2.82
SRP9P49458 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.58□□□□□ -2.82
SRP9P49458 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.58□□□□□ -2.82
SRP9P49458 MIR5683-201ENST00000636514 76 ntBASIC-2.58□□□□□ -2.82
SRP9P49458 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.59□□□□□ -2.82
SRP9P49458 RNU6-309P-201ENST00000364573 106 ntBASIC-2.59□□□□□ -2.82
SRP9P49458 RNU6-768P-201ENST00000384683 107 ntBASIC-2.59□□□□□ -2.82
SRP9P49458 MIR548F1-201ENST00000408667 84 ntBASIC-2.59□□□□□ -2.82
SRP9P49458 RNU7-152P-201ENST00000458982 64 ntBASIC-2.59□□□□□ -2.82
SRP9P49458 RNU6-732P-201ENST00000516033 103 ntBASIC-2.59□□□□□ -2.82
SRP9P49458 RNU6-168P-201ENST00000516189 101 ntBASIC-2.59□□□□□ -2.82
SRP9P49458 RNU6-132P-201ENST00000383863 107 ntBASIC-2.6□□□□□ -2.83
SRP9P49458 RNU6-260P-201ENST00000384092 107 ntBASIC-2.6□□□□□ -2.83
SRP9P49458 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.6□□□□□ -2.83
SRP9P49458 MIR1252-201ENST00000408861 65 ntBASIC-2.6□□□□□ -2.83
SRP9P49458 AC090616.4-201ENST00000448026 115 ntBASIC-2.6□□□□□ -2.83
SRP9P49458 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.61□□□□□ -2.83
SRP9P49458 SNORA24B-201ENST00000384176 131 ntBASIC-2.61□□□□□ -2.83
SRP9P49458 MIR759-201ENST00000390224 91 ntBASIC-2.61□□□□□ -2.83
SRP9P49458 RNU6-823P-201ENST00000391042 103 ntBASIC-2.61□□□□□ -2.83
SRP9P49458 RNU6-720P-201ENST00000516363 108 ntBASIC-2.61□□□□□ -2.83
SRP9P49458 AC025521.1-201ENST00000621624 286 ntBASIC-2.61□□□□□ -2.83
SRP9P49458 MIR203A-201ENST00000384836 110 ntBASIC-2.62□□□□□ -2.83
SRP9P49458 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.62□□□□□ -2.83
SRP9P49458 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.62□□□□□ -2.83
SRP9P49458 MIR4282-201ENST00000583613 67 ntBASIC-2.62□□□□□ -2.83
SRP9P49458 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.62□□□□□ -2.83
SRP9P49458 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.62□□□□□ -2.83
SRP9P49458 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.63□□□□□ -2.83
SRP9P49458 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.63□□□□□ -2.83
SRP9P49458 SNORD18B-201ENST00000365659 72 ntBASIC-2.63□□□□□ -2.83
SRP9P49458 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.63□□□□□ -2.83
SRP9P49458 SNORD19-201ENST00000391191 68 ntBASIC-2.63□□□□□ -2.83
SRP9P49458 RNU7-88P-201ENST00000458752 63 ntBASIC-2.63□□□□□ -2.83
SRP9P49458 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.63□□□□□ -2.83
SRP9P49458 MIR4760-201ENST00000585040 80 ntBASIC-2.63□□□□□ -2.83
SRP9P49458 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.64□□□□□ -2.83
SRP9P49458 RNU7-85P-201ENST00000458851 63 ntBASIC-2.64□□□□□ -2.83
SRP9P49458 RNU7-154P-201ENST00000516194 62 ntBASIC-2.64□□□□□ -2.83
SRP9P49458 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.65□□□□□ -2.83
SRP9P49458 RNU6-704P-201ENST00000364162 103 ntBASIC-2.65□□□□□ -2.83
SRP9P49458 MIR519A2-201ENST00000384990 87 ntBASIC-2.65□□□□□ -2.83
SRP9P49458 RNY3P16-201ENST00000516338 101 ntBASIC-2.65□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 250.8 ms