Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 Y_RNA.609-201ENST00000410669 89 ntBASIC0.46□□□□□ -2.34
SHC1P29353 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
SHC1P29353 RNA5SP268-201ENST00000516828 124 ntBASIC0.46□□□□□ -2.34
SHC1P29353 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.46□□□□□ -2.34
SHC1P29353 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
SHC1P29353 RNU6-716P-201ENST00000365621 103 ntBASIC0.45□□□□□ -2.34
SHC1P29353 RNU4-54P-201ENST00000516428 129 ntBASIC0.45□□□□□ -2.34
SHC1P29353 Y_RNA.694-201ENST00000516677 117 ntBASIC0.45□□□□□ -2.34
SHC1P29353 MIR5582-201ENST00000579697 68 ntBASIC0.45□□□□□ -2.34
SHC1P29353 MIR548AG2-201ENST00000581228 64 ntBASIC0.45□□□□□ -2.34
SHC1P29353 MIR4536-1-201ENST00000583537 88 ntBASIC0.45□□□□□ -2.34
SHC1P29353 MTRNR2L2-201ENST00000604882 87 ntBASIC0.45□□□□□ -2.34
SHC1P29353 AC067863.3-201ENST00000624172 122 ntBASIC0.45□□□□□ -2.34
SHC1P29353 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.45□□□□□ -2.34
SHC1P29353 RNU6-132P-201ENST00000383863 107 ntBASIC0.44□□□□□ -2.34
SHC1P29353 SNORA8.2-201ENST00000384372 139 ntBASIC0.44□□□□□ -2.34
SHC1P29353 RNU6-466P-201ENST00000391224 103 ntBASIC0.44□□□□□ -2.34
SHC1P29353 RNU6-519P-201ENST00000410590 108 ntBASIC0.44□□□□□ -2.34
SHC1P29353 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.44□□□□□ -2.34
SHC1P29353 RNU6-287P-201ENST00000516230 98 ntBASIC0.44□□□□□ -2.34
SHC1P29353 MIR4696-201ENST00000581431 70 ntBASIC0.44□□□□□ -2.34
SHC1P29353 SNORA25.18-201ENST00000607153 114 ntBASIC0.44□□□□□ -2.34
SHC1P29353 MIR7107-201ENST00000611489 80 ntBASIC0.44□□□□□ -2.34
SHC1P29353 MIRLET7F1-201ENST00000362202 87 ntBASIC0.43□□□□□ -2.34
SHC1P29353 SNORD118-201ENST00000363593 134 ntBASIC0.43□□□□□ -2.34
SHC1P29353 Y_RNA.220-201ENST00000364244 109 ntBASIC0.43□□□□□ -2.34
SHC1P29353 SNORD41.1-201ENST00000391000 69 ntBASIC0.43□□□□□ -2.34
SHC1P29353 RNA5SP227-201ENST00000516184 113 ntBASIC0.43□□□□□ -2.34
SHC1P29353 RNU6-65P-201ENST00000516332 98 ntBASIC0.43□□□□□ -2.34
SHC1P29353 RNU7-13P-201ENST00000516413 62 ntBASIC0.43□□□□□ -2.34
SHC1P29353 RNA5SP170-201ENST00000517150 101 ntBASIC0.43□□□□□ -2.34
SHC1P29353 RNU6-844P-201ENST00000517175 102 ntBASIC0.43□□□□□ -2.34
SHC1P29353 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.43□□□□□ -2.34
SHC1P29353 AC092634.7-201ENST00000621022 103 ntBASIC0.43□□□□□ -2.34
SHC1P29353 RNU6-664P-201ENST00000362381 107 ntBASIC0.42□□□□□ -2.34
SHC1P29353 Y_RNA.207-201ENST00000364142 106 ntBASIC0.42□□□□□ -2.34
SHC1P29353 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
SHC1P29353 RNY1P4-201ENST00000384595 115 ntBASIC0.42□□□□□ -2.34
SHC1P29353 Y_RNA.540-201ENST00000384638 111 ntBASIC0.42□□□□□ -2.34
SHC1P29353 RNU6-269P-201ENST00000391077 97 ntBASIC0.42□□□□□ -2.34
SHC1P29353 RNA5SP193-201ENST00000410353 107 ntBASIC0.42□□□□□ -2.34
SHC1P29353 Y_RNA.596-201ENST00000410462 109 ntBASIC0.42□□□□□ -2.34
SHC1P29353 AC069271.1-201ENST00000445577 156 ntBASIC0.42□□□□□ -2.34
SHC1P29353 MIR4711-201ENST00000578274 70 ntBASIC0.42□□□□□ -2.34
SHC1P29353 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
SHC1P29353 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.42□□□□□ -2.34
SHC1P29353 Y_RNA.369-201ENST00000365568 117 ntBASIC0.41□□□□□ -2.34
SHC1P29353 RNU6-1126P-201ENST00000384002 107 ntBASIC0.41□□□□□ -2.34
SHC1P29353 SNORD101-201ENST00000384027 73 ntBASIC0.41□□□□□ -2.34
SHC1P29353 MIR216A-201ENST00000385063 110 ntBASIC0.41□□□□□ -2.34
SHC1P29353 MIR548L-201ENST00000408303 86 ntBASIC0.41□□□□□ -2.34
SHC1P29353 RNU6-267P-201ENST00000516714 103 ntBASIC0.41□□□□□ -2.34
SHC1P29353 MIR4668-201ENST00000582284 70 ntBASIC0.41□□□□□ -2.34
SHC1P29353 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
SHC1P29353 SNORD115-27-201ENST00000364430 82 ntBASIC0.4□□□□□ -2.35
SHC1P29353 MIR518A1-201ENST00000385068 85 ntBASIC0.4□□□□□ -2.35
SHC1P29353 RNA5SP292-201ENST00000390974 118 ntBASIC0.4□□□□□ -2.35
SHC1P29353 SNORA40.8-201ENST00000411034 126 ntBASIC0.4□□□□□ -2.35
SHC1P29353 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
SHC1P29353 MIR2113-201ENST00000459007 91 ntBASIC0.4□□□□□ -2.35
SHC1P29353 MIR4752-201ENST00000579672 72 ntBASIC0.4□□□□□ -2.35
SHC1P29353 MIR3064-201ENST00000581130 66 ntBASIC0.4□□□□□ -2.35
SHC1P29353 AL162376.1-201ENST00000624117 175 ntBASIC0.4□□□□□ -2.35
SHC1P29353 Y_RNA.17-201ENST00000362433 111 ntBASIC0.39□□□□□ -2.35
SHC1P29353 RNU4-32P-201ENST00000363404 141 ntBASIC0.39□□□□□ -2.35
SHC1P29353 RNU6-219P-201ENST00000364728 107 ntBASIC0.39□□□□□ -2.35
SHC1P29353 SNORD116-22-201ENST00000384430 92 ntBASIC0.39□□□□□ -2.35
SHC1P29353 MIR519E-201ENST00000385075 84 ntBASIC0.39□□□□□ -2.35
SHC1P29353 RNU6-402P-201ENST00000410678 103 ntBASIC0.39□□□□□ -2.35
SHC1P29353 Y_RNA.620-201ENST00000411009 88 ntBASIC0.39□□□□□ -2.35
SHC1P29353 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.39□□□□□ -2.35
SHC1P29353 RN7SL793P-201ENST00000583259 296 ntBASIC0.39□□□□□ -2.35
SHC1P29353 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
SHC1P29353 SNORD44.1-201ENST00000363202 61 ntBASIC0.38□□□□□ -2.35
SHC1P29353 RNU6-1255P-201ENST00000363434 112 ntBASIC0.38□□□□□ -2.35
SHC1P29353 RNU6-294P-201ENST00000364999 102 ntBASIC0.38□□□□□ -2.35
SHC1P29353 SNORD115-44-201ENST00000365391 82 ntBASIC0.38□□□□□ -2.35
SHC1P29353 MIR617-201ENST00000385030 97 ntBASIC0.38□□□□□ -2.35
SHC1P29353 SNORD90-201ENST00000391145 111 ntBASIC0.38□□□□□ -2.35
SHC1P29353 Y_RNA.593-201ENST00000410292 98 ntBASIC0.38□□□□□ -2.35
SHC1P29353 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
SHC1P29353 RN7SKP12-201ENST00000516275 143 ntBASIC0.38□□□□□ -2.35
SHC1P29353 RNU7-153P-201ENST00000516455 62 ntBASIC0.38□□□□□ -2.35
SHC1P29353 AC104996.3-201ENST00000590718 94 ntBASIC0.38□□□□□ -2.35
SHC1P29353 RNU1-29P-201ENST00000606574 126 ntBASIC0.38□□□□□ -2.35
SHC1P29353 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
SHC1P29353 Y_RNA.36-201ENST00000362602 112 ntBASIC0.37□□□□□ -2.35
SHC1P29353 RNU6-633P-201ENST00000362612 103 ntBASIC0.37□□□□□ -2.35
SHC1P29353 Y_RNA.239-201ENST00000364444 113 ntBASIC0.37□□□□□ -2.35
SHC1P29353 RNU6-811P-201ENST00000384069 107 ntBASIC0.37□□□□□ -2.35
SHC1P29353 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
SHC1P29353 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SHC1P29353 RNU6-1052P-201ENST00000411398 104 ntBASIC0.37□□□□□ -2.35
SHC1P29353 SNORA18.5-201ENST00000516616 101 ntBASIC0.37□□□□□ -2.35
SHC1P29353 RNU6-719P-201ENST00000516671 104 ntBASIC0.37□□□□□ -2.35
SHC1P29353 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.37□□□□□ -2.35
SHC1P29353 Y_RNA.43-201ENST00000362670 111 ntBASIC0.36□□□□□ -2.35
SHC1P29353 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
SHC1P29353 RNU6-1134P-201ENST00000365156 101 ntBASIC0.36□□□□□ -2.35
SHC1P29353 RNU6-497P-201ENST00000365316 104 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms