Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 SNORA8.2-201ENST00000384372 139 ntBASIC0.66□□□□□ -2.3
SMARCA1P28370 Y_RNA.648-201ENST00000459455 110 ntBASIC0.66□□□□□ -2.3
SMARCA1P28370 RNU6-162P-201ENST00000516228 103 ntBASIC0.66□□□□□ -2.3
SMARCA1P28370 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.66□□□□□ -2.3
SMARCA1P28370 TRDV1-202ENST00000621643 102 ntBASIC0.66□□□□□ -2.3
SMARCA1P28370 AC067863.3-201ENST00000624172 122 ntBASIC0.66□□□□□ -2.3
SMARCA1P28370 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.3
SMARCA1P28370 RNA5SP347-201ENST00000362445 119 ntBASIC0.65□□□□□ -2.31
SMARCA1P28370 RNU6-726P-201ENST00000364680 107 ntBASIC0.65□□□□□ -2.31
SMARCA1P28370 RNA5SP227-201ENST00000516184 113 ntBASIC0.65□□□□□ -2.31
SMARCA1P28370 RNU6-168P-201ENST00000516189 101 ntBASIC0.65□□□□□ -2.31
SMARCA1P28370 SNORA40.13-201ENST00000516379 120 ntBASIC0.65□□□□□ -2.31
SMARCA1P28370 MIR3920-201ENST00000581751 86 ntBASIC0.65□□□□□ -2.31
SMARCA1P28370 SNORA25.18-201ENST00000607153 114 ntBASIC0.65□□□□□ -2.31
SMARCA1P28370 MIR7107-201ENST00000611489 80 ntBASIC0.65□□□□□ -2.31
SMARCA1P28370 Y_RNA.96-201ENST00000363092 109 ntBASIC0.64□□□□□ -2.31
SMARCA1P28370 RNA5SP89-201ENST00000410300 108 ntBASIC0.64□□□□□ -2.31
SMARCA1P28370 U7.3-201ENST00000616123 62 ntBASIC0.64□□□□□ -2.31
SMARCA1P28370 SNORD118-201ENST00000363593 134 ntBASIC0.63□□□□□ -2.31
SMARCA1P28370 RNU6-640P-201ENST00000363693 105 ntBASIC0.63□□□□□ -2.31
SMARCA1P28370 Y_RNA.283-201ENST00000364798 112 ntBASIC0.63□□□□□ -2.31
SMARCA1P28370 RNU6-905P-201ENST00000384434 107 ntBASIC0.63□□□□□ -2.31
SMARCA1P28370 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
SMARCA1P28370 SNORA40.8-201ENST00000411034 126 ntBASIC0.63□□□□□ -2.31
SMARCA1P28370 RNU7-85P-201ENST00000458851 63 ntBASIC0.63□□□□□ -2.31
SMARCA1P28370 AC243829.3-201ENST00000622177 108 ntBASIC0.63□□□□□ -2.31
SMARCA1P28370 MIR2052-201ENST00000636055 55 ntBASIC0.63□□□□□ -2.31
SMARCA1P28370 Y_RNA.190-201ENST00000363964 101 ntBASIC0.62□□□□□ -2.31
SMARCA1P28370 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
SMARCA1P28370 Y_RNA.258-201ENST00000364613 105 ntBASIC0.62□□□□□ -2.31
SMARCA1P28370 Y_RNA.290-201ENST00000364879 114 ntBASIC0.62□□□□□ -2.31
SMARCA1P28370 SNORD41.1-201ENST00000391000 69 ntBASIC0.62□□□□□ -2.31
SMARCA1P28370 RNU6-466P-201ENST00000391224 103 ntBASIC0.62□□□□□ -2.31
SMARCA1P28370 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.62□□□□□ -2.31
SMARCA1P28370 RN7SKP12-201ENST00000516275 143 ntBASIC0.62□□□□□ -2.31
SMARCA1P28370 RNU7-13P-201ENST00000516413 62 ntBASIC0.62□□□□□ -2.31
SMARCA1P28370 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
SMARCA1P28370 U6.100-201ENST00000636230 99 ntBASIC0.62□□□□□ -2.31
SMARCA1P28370 MIR518A1-201ENST00000385068 85 ntBASIC0.61□□□□□ -2.31
SMARCA1P28370 RNU6-75P-201ENST00000515944 104 ntBASIC0.61□□□□□ -2.31
SMARCA1P28370 Y_RNA.677-201ENST00000516401 85 ntBASIC0.61□□□□□ -2.31
SMARCA1P28370 MIR330-201ENST00000362196 94 ntBASIC0.6□□□□□ -2.31
SMARCA1P28370 MIR1197-201ENST00000408818 88 ntBASIC0.6□□□□□ -2.31
SMARCA1P28370 RNA5SP395-201ENST00000516567 118 ntBASIC0.6□□□□□ -2.31
SMARCA1P28370 MTRNR2L2-201ENST00000604882 87 ntBASIC0.6□□□□□ -2.31
SMARCA1P28370 SNORD116-10-201ENST00000363791 102 ntBASIC0.59□□□□□ -2.31
SMARCA1P28370 MIR548L-201ENST00000408303 86 ntBASIC0.59□□□□□ -2.31
SMARCA1P28370 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
SMARCA1P28370 AC069271.1-201ENST00000445577 156 ntBASIC0.59□□□□□ -2.31
SMARCA1P28370 MIR548AG2-201ENST00000581228 64 ntBASIC0.59□□□□□ -2.31
SMARCA1P28370 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
SMARCA1P28370 MIR488-201ENST00000365739 83 ntBASIC0.58□□□□□ -2.32
SMARCA1P28370 MIR4711-201ENST00000578274 70 ntBASIC0.58□□□□□ -2.32
SMARCA1P28370 AL162376.1-201ENST00000624117 175 ntBASIC0.58□□□□□ -2.32
SMARCA1P28370 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SMARCA1P28370 Y_RNA.596-201ENST00000410462 109 ntBASIC0.57□□□□□ -2.32
SMARCA1P28370 SNORD71-201ENST00000411292 86 ntBASIC0.57□□□□□ -2.32
SMARCA1P28370 SNORD4B-201ENST00000459083 72 ntBASIC0.57□□□□□ -2.32
SMARCA1P28370 SNORA68.3-201ENST00000515906 83 ntBASIC0.57□□□□□ -2.32
SMARCA1P28370 MIR4536-1-201ENST00000583537 88 ntBASIC0.57□□□□□ -2.32
SMARCA1P28370 MALAT1.1-201ENST00000618249 95 ntBASIC0.57□□□□□ -2.32
SMARCA1P28370 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
SMARCA1P28370 SNORD115-44-201ENST00000365391 82 ntBASIC0.56□□□□□ -2.32
SMARCA1P28370 RNU6-1126P-201ENST00000384002 107 ntBASIC0.56□□□□□ -2.32
SMARCA1P28370 RNU6-269P-201ENST00000391077 97 ntBASIC0.56□□□□□ -2.32
SMARCA1P28370 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.56□□□□□ -2.32
SMARCA1P28370 RNU6-287P-201ENST00000516230 98 ntBASIC0.56□□□□□ -2.32
SMARCA1P28370 RNU6-65P-201ENST00000516332 98 ntBASIC0.56□□□□□ -2.32
SMARCA1P28370 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
SMARCA1P28370 AC026421.1-201ENST00000519101 163 ntBASIC0.56□□□□□ -2.32
SMARCA1P28370 MIR4696-201ENST00000581431 70 ntBASIC0.56□□□□□ -2.32
SMARCA1P28370 SNORD44.1-201ENST00000363202 61 ntBASIC0.55□□□□□ -2.32
SMARCA1P28370 Y_RNA.207-201ENST00000364142 106 ntBASIC0.55□□□□□ -2.32
SMARCA1P28370 RNU6-35P-201ENST00000384530 107 ntBASIC0.55□□□□□ -2.32
SMARCA1P28370 RNU6-519P-201ENST00000410590 108 ntBASIC0.55□□□□□ -2.32
SMARCA1P28370 SNORA62.5-201ENST00000516634 120 ntBASIC0.55□□□□□ -2.32
SMARCA1P28370 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.55□□□□□ -2.32
SMARCA1P28370 MIR4752-201ENST00000579672 72 ntBASIC0.55□□□□□ -2.32
SMARCA1P28370 SNORD101-201ENST00000384027 73 ntBASIC0.54□□□□□ -2.32
SMARCA1P28370 RNA5SP193-201ENST00000410353 107 ntBASIC0.54□□□□□ -2.32
SMARCA1P28370 Y_RNA.609-201ENST00000410669 89 ntBASIC0.54□□□□□ -2.32
SMARCA1P28370 MIR2113-201ENST00000459007 91 ntBASIC0.54□□□□□ -2.32
SMARCA1P28370 RNU6-664P-201ENST00000362381 107 ntBASIC0.53□□□□□ -2.32
SMARCA1P28370 RNU2-59P-201ENST00000410482 191 ntBASIC0.53□□□□□ -2.32
SMARCA1P28370 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
SMARCA1P28370 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
SMARCA1P28370 RNU1-29P-201ENST00000606574 126 ntBASIC0.53□□□□□ -2.32
SMARCA1P28370 MIRLET7F1-201ENST00000362202 87 ntBASIC0.52□□□□□ -2.33
SMARCA1P28370 RNU6-132P-201ENST00000383863 107 ntBASIC0.52□□□□□ -2.33
SMARCA1P28370 MIR617-201ENST00000385030 97 ntBASIC0.52□□□□□ -2.33
SMARCA1P28370 MIR519E-201ENST00000385075 84 ntBASIC0.52□□□□□ -2.33
SMARCA1P28370 MIRLET7D-201ENST00000362263 87 ntBASIC0.51□□□□□ -2.33
SMARCA1P28370 RNY1P7-201ENST00000384743 110 ntBASIC0.51□□□□□ -2.33
SMARCA1P28370 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.51□□□□□ -2.33
SMARCA1P28370 MIR103A1-201ENST00000362165 78 ntBASIC0.5□□□□□ -2.33
SMARCA1P28370 HAR1A.1-201ENST00000459583 118 ntBASIC0.5□□□□□ -2.33
SMARCA1P28370 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
SMARCA1P28370 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.5□□□□□ -2.33
SMARCA1P28370 MIR6755-201ENST00000619993 66 ntBASIC0.5□□□□□ -2.33
SMARCA1P28370 RNA5SP476-201ENST00000516613 103 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms