Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SNORD114-27-201ENST00000363766 70 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 SNORD115-37-201ENST00000363768 82 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 RNU6-1276P-201ENST00000365372 104 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 SNORD115-44-201ENST00000365391 82 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 RNU6-132P-201ENST00000383863 107 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 SNORD28-201ENST00000384706 75 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 MIR598-201ENST00000384868 97 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 RNU6-592P-201ENST00000411333 103 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 MIR3678-201ENST00000578455 94 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 MIR4696-201ENST00000581431 70 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 AC104996.3-201ENST00000590718 94 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 AL353765.1-201ENST00000605514 183 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 U6.100-201ENST00000636230 99 ntBASIC1.03□□□□□ -2.24
COL6A2P12110 SNORD18A-201ENST00000363753 72 ntBASIC1.02□□□□□ -2.25
COL6A2P12110 SNORD101-201ENST00000384027 73 ntBASIC1.02□□□□□ -2.25
COL6A2P12110 Y_RNA.607-201ENST00000410597 98 ntBASIC1.02□□□□□ -2.25
COL6A2P12110 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
COL6A2P12110 AC011195.1-201ENST00000578177 177 ntBASIC1.02□□□□□ -2.25
COL6A2P12110 MIR151B-201ENST00000584249 96 ntBASIC1.02□□□□□ -2.25
COL6A2P12110 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
COL6A2P12110 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
COL6A2P12110 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
COL6A2P12110 MIR18A-201ENST00000362310 71 ntBASIC1.01□□□□□ -2.25
COL6A2P12110 Y_RNA.239-201ENST00000364444 113 ntBASIC1.01□□□□□ -2.25
COL6A2P12110 Y_RNA.491-201ENST00000384417 107 ntBASIC1.01□□□□□ -2.25
COL6A2P12110 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.01□□□□□ -2.25
COL6A2P12110 RNU7-153P-201ENST00000516455 62 ntBASIC1.01□□□□□ -2.25
COL6A2P12110 RNA5SP47-201ENST00000517230 109 ntBASIC1.01□□□□□ -2.25
COL6A2P12110 AC140658.3-201ENST00000567603 271 ntBASIC1.01□□□□□ -2.25
COL6A2P12110 MIRLET7F1-201ENST00000362202 87 ntBASIC1□□□□□ -2.25
COL6A2P12110 RNA5SP292-201ENST00000390974 118 ntBASIC1□□□□□ -2.25
COL6A2P12110 SNORA18.5-201ENST00000516616 101 ntBASIC1□□□□□ -2.25
COL6A2P12110 AC244669.1-204ENST00000621564 178 ntBASIC1□□□□□ -2.25
COL6A2P12110 RNU6-573P-201ENST00000383938 106 ntBASIC0.99□□□□□ -2.25
COL6A2P12110 MIR548J-201ENST00000408833 112 ntBASIC0.99□□□□□ -2.25
COL6A2P12110 SNORA25.13-201ENST00000516395 103 ntBASIC0.99□□□□□ -2.25
COL6A2P12110 RNU7-13P-201ENST00000516413 62 ntBASIC0.99□□□□□ -2.25
COL6A2P12110 MIR4666B-201ENST00000578142 81 ntBASIC0.99□□□□□ -2.25
COL6A2P12110 MIR4796-201ENST00000580742 81 ntBASIC0.99□□□□□ -2.25
COL6A2P12110 MIR3920-201ENST00000581751 86 ntBASIC0.99□□□□□ -2.25
COL6A2P12110 AC067863.3-201ENST00000624172 122 ntBASIC0.99□□□□□ -2.25
COL6A2P12110 Y_RNA.207-201ENST00000364142 106 ntBASIC0.98□□□□□ -2.25
COL6A2P12110 Y_RNA.219-201ENST00000364232 113 ntBASIC0.98□□□□□ -2.25
COL6A2P12110 RNU6-1229P-201ENST00000364295 107 ntBASIC0.98□□□□□ -2.25
COL6A2P12110 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
COL6A2P12110 MIR608-201ENST00000384820 100 ntBASIC0.98□□□□□ -2.25
COL6A2P12110 RNU6-624P-201ENST00000363411 107 ntBASIC0.97□□□□□ -2.25
COL6A2P12110 Y_RNA.205-201ENST00000364128 113 ntBASIC0.97□□□□□ -2.25
COL6A2P12110 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
COL6A2P12110 RNU6-287P-201ENST00000516230 98 ntBASIC0.97□□□□□ -2.25
COL6A2P12110 SCARNA16.5-201ENST00000517114 183 ntBASIC0.97□□□□□ -2.25
COL6A2P12110 MIR6828-201ENST00000636181 60 ntBASIC0.97□□□□□ -2.25
COL6A2P12110 RNU6-1126P-201ENST00000384002 107 ntBASIC0.96□□□□□ -2.26
COL6A2P12110 SNORD41.1-201ENST00000391000 69 ntBASIC0.96□□□□□ -2.26
COL6A2P12110 RNU7-104P-201ENST00000459398 79 ntBASIC0.96□□□□□ -2.26
COL6A2P12110 MIR3202-2-201ENST00000635980 79 ntBASIC0.96□□□□□ -2.26
COL6A2P12110 MIR6767-201ENST00000637302 66 ntBASIC0.96□□□□□ -2.26
COL6A2P12110 RNU6-935P-201ENST00000410371 100 ntBASIC0.95□□□□□ -2.26
COL6A2P12110 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
COL6A2P12110 RNU6-726P-201ENST00000364680 107 ntBASIC0.94□□□□□ -2.26
COL6A2P12110 RNU6-787P-201ENST00000384032 107 ntBASIC0.94□□□□□ -2.26
COL6A2P12110 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.94□□□□□ -2.26
COL6A2P12110 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.94□□□□□ -2.26
COL6A2P12110 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL6A2P12110 MIR617-201ENST00000385030 97 ntBASIC0.93□□□□□ -2.26
COL6A2P12110 MIR548AG2-201ENST00000581228 64 ntBASIC0.93□□□□□ -2.26
COL6A2P12110 AC211469.2-201ENST00000605461 205 ntBASIC0.93□□□□□ -2.26
COL6A2P12110 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.93□□□□□ -2.26
COL6A2P12110 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.93□□□□□ -2.26
COL6A2P12110 MIR1245B-201ENST00000636115 69 ntBASIC0.93□□□□□ -2.26
COL6A2P12110 Y_RNA.374-201ENST00000365606 101 ntBASIC0.92□□□□□ -2.26
COL6A2P12110 U3.27-201ENST00000391237 200 ntBASIC0.92□□□□□ -2.26
COL6A2P12110 RNA5SP222-201ENST00000411039 105 ntBASIC0.92□□□□□ -2.26
COL6A2P12110 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A2P12110 MIR2113-201ENST00000459007 91 ntBASIC0.92□□□□□ -2.26
COL6A2P12110 RNU7-74P-201ENST00000459104 62 ntBASIC0.92□□□□□ -2.26
COL6A2P12110 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
COL6A2P12110 RNU6-557P-201ENST00000516842 110 ntBASIC0.92□□□□□ -2.26
COL6A2P12110 RNY4P3-201ENST00000365254 95 ntBASIC0.91□□□□□ -2.26
COL6A2P12110 RNU6-1051P-201ENST00000365471 102 ntBASIC0.91□□□□□ -2.26
COL6A2P12110 RNU6-110P-201ENST00000384508 104 ntBASIC0.91□□□□□ -2.26
COL6A2P12110 SNORD78.1-201ENST00000390866 65 ntBASIC0.91□□□□□ -2.26
COL6A2P12110 RNA5SP436-201ENST00000516020 115 ntBASIC0.91□□□□□ -2.26
COL6A2P12110 RNA5SP94-201ENST00000516917 108 ntBASIC0.91□□□□□ -2.26
COL6A2P12110 RNU6-1057P-201ENST00000517162 102 ntBASIC0.91□□□□□ -2.26
COL6A2P12110 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
COL6A2P12110 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.26
COL6A2P12110 SNORA63.2-201ENST00000362603 126 ntBASIC0.9□□□□□ -2.27
COL6A2P12110 SNORA36.1-201ENST00000363424 132 ntBASIC0.9□□□□□ -2.27
COL6A2P12110 Y_RNA.437-201ENST00000384113 113 ntBASIC0.9□□□□□ -2.27
COL6A2P12110 MIR216B-201ENST00000390186 82 ntBASIC0.9□□□□□ -2.27
COL6A2P12110 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.9□□□□□ -2.27
COL6A2P12110 Y_RNA.685-201ENST00000516532 108 ntBASIC0.9□□□□□ -2.27
COL6A2P12110 Y_RNA.316-201ENST00000365118 111 ntBASIC0.89□□□□□ -2.27
COL6A2P12110 FGF7P7-201ENST00000514120 227 ntBASIC0.89□□□□□ -2.27
COL6A2P12110 Y_RNA.660-201ENST00000516002 120 ntBASIC0.89□□□□□ -2.27
COL6A2P12110 RNU6-1124P-201ENST00000384169 107 ntBASIC0.88□□□□□ -2.27
COL6A2P12110 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
COL6A2P12110 MIR451A-201ENST00000385059 72 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 335.7 ms