Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.94□□□□□ -2.72
TNFP01375 MIR2053-201ENST00000459295 91 ntBASIC-1.94□□□□□ -2.72
TNFP01375 RNU6-240P-201ENST00000516098 97 ntBASIC-1.94□□□□□ -2.72
TNFP01375 MIR367-201ENST00000362299 68 ntBASIC-1.95□□□□□ -2.72
TNFP01375 RNU6-508P-201ENST00000363231 103 ntBASIC-1.95□□□□□ -2.72
TNFP01375 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.95□□□□□ -2.72
TNFP01375 RNU6-309P-201ENST00000364573 106 ntBASIC-1.95□□□□□ -2.72
TNFP01375 SNORD50.2-201ENST00000365465 70 ntBASIC-1.95□□□□□ -2.72
TNFP01375 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.95□□□□□ -2.72
TNFP01375 MIR526A2-201ENST00000390198 65 ntBASIC-1.95□□□□□ -2.72
TNFP01375 MIR6128-201ENST00000615528 109 ntBASIC-1.95□□□□□ -2.72
TNFP01375 MIR4773-1-201ENST00000637203 78 ntBASIC-1.95□□□□□ -2.72
TNFP01375 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.96□□□□□ -2.72
TNFP01375 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.96□□□□□ -2.72
TNFP01375 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.96□□□□□ -2.72
TNFP01375 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.96□□□□□ -2.72
TNFP01375 SNORA75-201ENST00000384158 137 ntBASIC-1.96□□□□□ -2.72
TNFP01375 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.96□□□□□ -2.72
TNFP01375 MIR122-201ENST00000385044 85 ntBASIC-1.96□□□□□ -2.72
TNFP01375 RNU6-530P-201ENST00000391180 107 ntBASIC-1.96□□□□□ -2.72
TNFP01375 RNU7-164P-201ENST00000459221 62 ntBASIC-1.96□□□□□ -2.72
TNFP01375 RNU6-507P-201ENST00000516045 100 ntBASIC-1.96□□□□□ -2.72
TNFP01375 RNU6-120P-201ENST00000516077 103 ntBASIC-1.96□□□□□ -2.72
TNFP01375 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.96□□□□□ -2.72
TNFP01375 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.96□□□□□ -2.72
TNFP01375 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.96□□□□□ -2.72
TNFP01375 U6.92-201ENST00000636464 89 ntBASIC-1.96□□□□□ -2.72
TNFP01375 AC068137.3-201ENST00000639191 341 ntBASIC-1.96□□□□□ -2.72
TNFP01375 MIR624-201ENST00000385217 97 ntBASIC-1.97□□□□□ -2.72
TNFP01375 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.97□□□□□ -2.72
TNFP01375 MIR513C-201ENST00000401352 84 ntBASIC-1.97□□□□□ -2.72
TNFP01375 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.97□□□□□ -2.72
TNFP01375 AC009161.1-201ENST00000417306 376 ntBASIC-1.97□□□□□ -2.72
TNFP01375 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.97□□□□□ -2.72
TNFP01375 RNU6-976P-201ENST00000516086 111 ntBASIC-1.97□□□□□ -2.72
TNFP01375 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.97□□□□□ -2.72
TNFP01375 MIR3646-201ENST00000578301 84 ntBASIC-1.97□□□□□ -2.72
TNFP01375 AL731768.1-201ENST00000603124 139 ntBASIC-1.97□□□□□ -2.72
TNFP01375 AL021368.1-201ENST00000607490 540 ntBASIC-1.97□□□□□ -2.72
TNFP01375 RNY3P10-201ENST00000384764 102 ntBASIC-1.98□□□□□ -2.73
TNFP01375 RNU6-587P-201ENST00000391282 106 ntBASIC-1.98□□□□□ -2.73
TNFP01375 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.98□□□□□ -2.73
TNFP01375 RNU6-570P-201ENST00000517051 105 ntBASIC-1.98□□□□□ -2.73
TNFP01375 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.98□□□□□ -2.73
TNFP01375 U4.4-201ENST00000620626 117 ntBASIC-1.98□□□□□ -2.73
TNFP01375 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.99□□□□□ -2.73
TNFP01375 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.99□□□□□ -2.73
TNFP01375 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.99□□□□□ -2.73
TNFP01375 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.99□□□□□ -2.73
TNFP01375 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.99□□□□□ -2.73
TNFP01375 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.99□□□□□ -2.73
TNFP01375 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.99□□□□□ -2.73
TNFP01375 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.99□□□□□ -2.73
TNFP01375 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.99□□□□□ -2.73
TNFP01375 RNU6-106P-201ENST00000384405 107 ntBASIC-1.99□□□□□ -2.73
TNFP01375 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.99□□□□□ -2.73
TNFP01375 MIR759-201ENST00000390224 91 ntBASIC-1.99□□□□□ -2.73
TNFP01375 SNORA69.1-201ENST00000390904 137 ntBASIC-1.99□□□□□ -2.73
TNFP01375 SNORD77B-201ENST00000391112 67 ntBASIC-1.99□□□□□ -2.73
TNFP01375 MTND2P14-201ENST00000482139 351 ntBASIC-1.99□□□□□ -2.73
TNFP01375 AC019235.1-201ENST00000503847 207 ntBASIC-1.99□□□□□ -2.73
TNFP01375 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.99□□□□□ -2.73
TNFP01375 RNU7-174P-201ENST00000516248 59 ntBASIC-1.99□□□□□ -2.73
TNFP01375 RNU6-971P-201ENST00000516920 106 ntBASIC-1.99□□□□□ -2.73
TNFP01375 RNA5SP106-201ENST00000517274 100 ntBASIC-1.99□□□□□ -2.73
TNFP01375 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.99□□□□□ -2.73
TNFP01375 MIR4536-1-201ENST00000583537 88 ntBASIC-1.99□□□□□ -2.73
TNFP01375 C8orf59P2-201ENST00000603441 271 ntBASIC-1.99□□□□□ -2.73
TNFP01375 RNU6-1272P-201ENST00000362776 107 ntBASIC-2□□□□□ -2.73
TNFP01375 RNU6-99P-201ENST00000364721 107 ntBASIC-2□□□□□ -2.73
TNFP01375 Y_RNA.474-201ENST00000384341 102 ntBASIC-2□□□□□ -2.73
TNFP01375 MT-TW-201ENST00000387382 68 ntBASIC-2□□□□□ -2.73
TNFP01375 Y_RNA.594-201ENST00000410373 140 ntBASIC-2□□□□□ -2.73
TNFP01375 MTND1P1-201ENST00000445453 368 ntBASIC-2□□□□□ -2.73
TNFP01375 RNU6-807P-201ENST00000516805 107 ntBASIC-2□□□□□ -2.73
TNFP01375 AC104996.3-201ENST00000590718 94 ntBASIC-2□□□□□ -2.73
TNFP01375 U6.81-201ENST00000612550 106 ntBASIC-2□□□□□ -2.73
TNFP01375 AC138305.3-201ENST00000624988 240 ntBASIC-2□□□□□ -2.73
TNFP01375 SNORD18C-201ENST00000362704 69 ntBASIC-2.01□□□□□ -2.73
TNFP01375 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.01□□□□□ -2.73
TNFP01375 RNU6-912P-201ENST00000363800 104 ntBASIC-2.01□□□□□ -2.73
TNFP01375 RNU6-669P-201ENST00000365575 107 ntBASIC-2.01□□□□□ -2.73
TNFP01375 Y_RNA.509-201ENST00000384506 99 ntBASIC-2.01□□□□□ -2.73
TNFP01375 RNU7-151P-201ENST00000516930 53 ntBASIC-2.01□□□□□ -2.73
TNFP01375 AC006254.2-201ENST00000603259 279 ntBASIC-2.01□□□□□ -2.73
TNFP01375 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.01□□□□□ -2.73
TNFP01375 Y_RNA.176-201ENST00000363815 109 ntBASIC-2.02□□□□□ -2.73
TNFP01375 SNORD38.1-201ENST00000363863 68 ntBASIC-2.02□□□□□ -2.73
TNFP01375 Y_RNA.409-201ENST00000383990 98 ntBASIC-2.02□□□□□ -2.73
TNFP01375 Y_RNA.462-201ENST00000384268 102 ntBASIC-2.02□□□□□ -2.73
TNFP01375 Y_RNA.467-201ENST00000384297 102 ntBASIC-2.02□□□□□ -2.73
TNFP01375 RNU2-38P-201ENST00000410856 79 ntBASIC-2.02□□□□□ -2.73
TNFP01375 RNY4P25-201ENST00000459254 96 ntBASIC-2.02□□□□□ -2.73
TNFP01375 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.02□□□□□ -2.73
TNFP01375 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.02□□□□□ -2.73
TNFP01375 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.03□□□□□ -2.73
TNFP01375 Y_RNA.296-201ENST00000364930 108 ntBASIC-2.03□□□□□ -2.73
TNFP01375 Y_RNA.404-201ENST00000383978 102 ntBASIC-2.03□□□□□ -2.73
TNFP01375 RNU6-937P-201ENST00000384325 106 ntBASIC-2.03□□□□□ -2.73
TNFP01375 SNORD38.2-201ENST00000384470 69 ntBASIC-2.03□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 243.3 ms