Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 Y_RNA.423-201ENST00000384057 113 ntBASIC0.34□□□□□ -2.36
CLPTM1O96005 RNU6-813P-201ENST00000384691 107 ntBASIC0.34□□□□□ -2.36
CLPTM1O96005 SNORD41.1-201ENST00000391000 69 ntBASIC0.34□□□□□ -2.36
CLPTM1O96005 SNORA62.5-201ENST00000516634 120 ntBASIC0.34□□□□□ -2.36
CLPTM1O96005 RNU6-919P-201ENST00000516731 104 ntBASIC0.34□□□□□ -2.36
CLPTM1O96005 AL513043.2-201ENST00000573941 143 ntBASIC0.34□□□□□ -2.36
CLPTM1O96005 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
CLPTM1O96005 U6.100-201ENST00000636230 99 ntBASIC0.34□□□□□ -2.36
CLPTM1O96005 RNU6-766P-201ENST00000362478 107 ntBASIC0.33□□□□□ -2.36
CLPTM1O96005 RNU6-466P-201ENST00000391224 103 ntBASIC0.33□□□□□ -2.36
CLPTM1O96005 RNU2-59P-201ENST00000410482 191 ntBASIC0.33□□□□□ -2.36
CLPTM1O96005 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.33□□□□□ -2.36
CLPTM1O96005 AL031737.1-201ENST00000450125 223 ntBASIC0.33□□□□□ -2.36
CLPTM1O96005 AL109933.3-201ENST00000619095 188 ntBASIC0.33□□□□□ -2.36
CLPTM1O96005 MIR6755-201ENST00000619993 66 ntBASIC0.33□□□□□ -2.36
CLPTM1O96005 AL162376.1-201ENST00000624117 175 ntBASIC0.33□□□□□ -2.36
CLPTM1O96005 RNA5SP62-201ENST00000363457 110 ntBASIC0.32□□□□□ -2.36
CLPTM1O96005 Y_RNA.283-201ENST00000364798 112 ntBASIC0.32□□□□□ -2.36
CLPTM1O96005 RNU6-44P-201ENST00000384045 107 ntBASIC0.32□□□□□ -2.36
CLPTM1O96005 RNU6-1113P-201ENST00000384348 107 ntBASIC0.32□□□□□ -2.36
CLPTM1O96005 RNU6-269P-201ENST00000391077 97 ntBASIC0.32□□□□□ -2.36
CLPTM1O96005 RNU6-644P-201ENST00000391155 98 ntBASIC0.32□□□□□ -2.36
CLPTM1O96005 MIR1197-201ENST00000408818 88 ntBASIC0.32□□□□□ -2.36
CLPTM1O96005 AL035461.1-201ENST00000421490 332 ntBASIC0.32□□□□□ -2.36
CLPTM1O96005 MIR330-201ENST00000362196 94 ntBASIC0.31□□□□□ -2.36
CLPTM1O96005 Y_RNA.107-201ENST00000363190 121 ntBASIC0.31□□□□□ -2.36
CLPTM1O96005 RNU7-61P-201ENST00000515897 61 ntBASIC0.31□□□□□ -2.36
CLPTM1O96005 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
CLPTM1O96005 MIR548AG2-201ENST00000581228 64 ntBASIC0.31□□□□□ -2.36
CLPTM1O96005 RNA5SP257-201ENST00000363023 116 ntBASIC0.3□□□□□ -2.36
CLPTM1O96005 Y_RNA.648-201ENST00000459455 110 ntBASIC0.3□□□□□ -2.36
CLPTM1O96005 Y_RNA.705-201ENST00000516862 110 ntBASIC0.3□□□□□ -2.36
CLPTM1O96005 RNU1-29P-201ENST00000606574 126 ntBASIC0.3□□□□□ -2.36
CLPTM1O96005 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.3□□□□□ -2.36
CLPTM1O96005 SNORA70.25-201ENST00000612741 95 ntBASIC0.3□□□□□ -2.36
CLPTM1O96005 Y_RNA.818-201ENST00000618813 71 ntBASIC0.3□□□□□ -2.36
CLPTM1O96005 Y_RNA.68-201ENST00000362881 102 ntBASIC0.29□□□□□ -2.36
CLPTM1O96005 RNU6-755P-201ENST00000364400 103 ntBASIC0.29□□□□□ -2.36
CLPTM1O96005 Y_RNA.258-201ENST00000364613 105 ntBASIC0.29□□□□□ -2.36
CLPTM1O96005 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
CLPTM1O96005 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.29□□□□□ -2.36
CLPTM1O96005 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 Y_RNA.178-201ENST00000363832 102 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 SNORD115-44-201ENST00000365391 82 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 Y_RNA.596-201ENST00000410462 109 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 RNU6-887P-201ENST00000410660 100 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 AC073261.1-201ENST00000429409 121 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 RNU7-85P-201ENST00000458851 63 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 RNA5SP484-201ENST00000458857 111 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 MIR2113-201ENST00000459007 91 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 RNU6-75P-201ENST00000515944 104 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 RNU7-129P-201ENST00000516128 62 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 RNU6-162P-201ENST00000516228 103 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 MIR4514-201ENST00000581410 57 ntBASIC0.28□□□□□ -2.36
CLPTM1O96005 RNU6-815P-201ENST00000384080 113 ntBASIC0.27□□□□□ -2.37
CLPTM1O96005 MIR519E-201ENST00000385075 84 ntBASIC0.27□□□□□ -2.37
CLPTM1O96005 MIR760-201ENST00000390220 80 ntBASIC0.27□□□□□ -2.37
CLPTM1O96005 RNU6-972P-201ENST00000391208 107 ntBASIC0.27□□□□□ -2.37
CLPTM1O96005 RNU6-287P-201ENST00000516230 98 ntBASIC0.27□□□□□ -2.37
CLPTM1O96005 RNU6-1232P-201ENST00000516299 86 ntBASIC0.27□□□□□ -2.37
CLPTM1O96005 NAMPTP3-201ENST00000569273 224 ntBASIC0.27□□□□□ -2.37
CLPTM1O96005 Y_RNA.93-201ENST00000363066 109 ntBASIC0.26□□□□□ -2.37
CLPTM1O96005 RNU6-147P-201ENST00000383983 107 ntBASIC0.26□□□□□ -2.37
CLPTM1O96005 SNORD101-201ENST00000384027 73 ntBASIC0.26□□□□□ -2.37
CLPTM1O96005 Y_RNA.544-201ENST00000384650 113 ntBASIC0.26□□□□□ -2.37
CLPTM1O96005 MIR617-201ENST00000385030 97 ntBASIC0.26□□□□□ -2.37
CLPTM1O96005 RNU6-863P-201ENST00000515989 104 ntBASIC0.26□□□□□ -2.37
CLPTM1O96005 RNU6-65P-201ENST00000516332 98 ntBASIC0.26□□□□□ -2.37
CLPTM1O96005 AC073869.9-201ENST00000641610 120 ntBASIC0.26□□□□□ -2.37
CLPTM1O96005 RNU6-664P-201ENST00000362381 107 ntBASIC0.25□□□□□ -2.37
CLPTM1O96005 Y_RNA.207-201ENST00000364142 106 ntBASIC0.25□□□□□ -2.37
CLPTM1O96005 SNORD58A-201ENST00000383875 65 ntBASIC0.25□□□□□ -2.37
CLPTM1O96005 SNORA2A-201ENST00000383885 135 ntBASIC0.25□□□□□ -2.37
CLPTM1O96005 AC006210.1-201ENST00000424882 111 ntBASIC0.25□□□□□ -2.37
CLPTM1O96005 Y_RNA.681-201ENST00000516445 113 ntBASIC0.25□□□□□ -2.37
CLPTM1O96005 MIR4696-201ENST00000581431 70 ntBASIC0.25□□□□□ -2.37
CLPTM1O96005 MIR4536-1-201ENST00000583537 88 ntBASIC0.25□□□□□ -2.37
CLPTM1O96005 MTRNR2L2-201ENST00000604882 87 ntBASIC0.25□□□□□ -2.37
CLPTM1O96005 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.25□□□□□ -2.37
CLPTM1O96005 MIRLET7F1-201ENST00000362202 87 ntBASIC0.24□□□□□ -2.37
CLPTM1O96005 Y_RNA.96-201ENST00000363092 109 ntBASIC0.24□□□□□ -2.37
CLPTM1O96005 RNU6-509P-201ENST00000363519 107 ntBASIC0.24□□□□□ -2.37
CLPTM1O96005 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
CLPTM1O96005 RNU6-519P-201ENST00000410590 108 ntBASIC0.24□□□□□ -2.37
CLPTM1O96005 RNU7-74P-201ENST00000459104 62 ntBASIC0.24□□□□□ -2.37
CLPTM1O96005 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
CLPTM1O96005 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
CLPTM1O96005 U7.3-201ENST00000616123 62 ntBASIC0.24□□□□□ -2.37
CLPTM1O96005 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CLPTM1O96005 SNORD110-201ENST00000408189 75 ntBASIC0.23□□□□□ -2.37
CLPTM1O96005 MTATP8P2-201ENST00000435212 202 ntBASIC0.23□□□□□ -2.37
CLPTM1O96005 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
CLPTM1O96005 SNORA9.1-201ENST00000362412 131 ntBASIC0.22□□□□□ -2.37
CLPTM1O96005 SNORD116-10-201ENST00000363791 102 ntBASIC0.22□□□□□ -2.37
CLPTM1O96005 RNU1-141P-201ENST00000364623 158 ntBASIC0.22□□□□□ -2.37
CLPTM1O96005 RNA5SP128-201ENST00000365305 116 ntBASIC0.22□□□□□ -2.37
CLPTM1O96005 RNU6-132P-201ENST00000383863 107 ntBASIC0.22□□□□□ -2.37
CLPTM1O96005 SNORD4B-201ENST00000459083 72 ntBASIC0.22□□□□□ -2.37
CLPTM1O96005 AP001318.4-201ENST00000616637 121 ntBASIC0.22□□□□□ -2.37
CLPTM1O96005 MIR499B-201ENST00000636498 73 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 206.8 ms