Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 MIR6515-201ENST00000619843 57 ntBASIC0.78□□□□□ -2.28
USP1O94782 AC244669.1-204ENST00000621564 178 ntBASIC0.78□□□□□ -2.28
USP1O94782 RNU6-509P-201ENST00000363519 107 ntBASIC0.77□□□□□ -2.29
USP1O94782 RNU6-497P-201ENST00000365316 104 ntBASIC0.77□□□□□ -2.29
USP1O94782 Y_RNA.388-201ENST00000383919 113 ntBASIC0.77□□□□□ -2.29
USP1O94782 SNORA36.2-201ENST00000384004 127 ntBASIC0.77□□□□□ -2.29
USP1O94782 RNU6-811P-201ENST00000384069 107 ntBASIC0.77□□□□□ -2.29
USP1O94782 SNORD28-201ENST00000384706 75 ntBASIC0.77□□□□□ -2.29
USP1O94782 AC022137.1-201ENST00000483735 151 ntBASIC0.77□□□□□ -2.29
USP1O94782 RNU7-153P-201ENST00000516455 62 ntBASIC0.77□□□□□ -2.29
USP1O94782 MIR3064-201ENST00000581130 66 ntBASIC0.77□□□□□ -2.29
USP1O94782 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
USP1O94782 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
USP1O94782 RNU6-633P-201ENST00000362612 103 ntBASIC0.76□□□□□ -2.29
USP1O94782 RNU6-1229P-201ENST00000364295 107 ntBASIC0.76□□□□□ -2.29
USP1O94782 RNY1P1-201ENST00000364372 112 ntBASIC0.76□□□□□ -2.29
USP1O94782 MIR450A2-201ENST00000385022 100 ntBASIC0.76□□□□□ -2.29
USP1O94782 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
USP1O94782 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.76□□□□□ -2.29
USP1O94782 Y_RNA.611-201ENST00000410682 108 ntBASIC0.76□□□□□ -2.29
USP1O94782 RNU6-592P-201ENST00000411333 103 ntBASIC0.76□□□□□ -2.29
USP1O94782 MIR4639-201ENST00000584938 69 ntBASIC0.76□□□□□ -2.29
USP1O94782 AC104996.3-201ENST00000590718 94 ntBASIC0.76□□□□□ -2.29
USP1O94782 MIR548BB-201ENST00000626714 66 ntBASIC0.76□□□□□ -2.29
USP1O94782 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
USP1O94782 SNORA36.1-201ENST00000363424 132 ntBASIC0.75□□□□□ -2.29
USP1O94782 RNU6-716P-201ENST00000365621 103 ntBASIC0.75□□□□□ -2.29
USP1O94782 SNORD101-201ENST00000384027 73 ntBASIC0.75□□□□□ -2.29
USP1O94782 SNORA26.2-201ENST00000390922 122 ntBASIC0.75□□□□□ -2.29
USP1O94782 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
USP1O94782 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.75□□□□□ -2.29
USP1O94782 RNU7-13P-201ENST00000516413 62 ntBASIC0.75□□□□□ -2.29
USP1O94782 RNA5SP94-201ENST00000516917 108 ntBASIC0.75□□□□□ -2.29
USP1O94782 RNA5SP47-201ENST00000517230 109 ntBASIC0.75□□□□□ -2.29
USP1O94782 MIR519C-201ENST00000385053 87 ntBASIC0.74□□□□□ -2.29
USP1O94782 SNORD90-201ENST00000391145 111 ntBASIC0.74□□□□□ -2.29
USP1O94782 Y_RNA.596-201ENST00000410462 109 ntBASIC0.74□□□□□ -2.29
USP1O94782 MIR548AG2-201ENST00000581228 64 ntBASIC0.74□□□□□ -2.29
USP1O94782 MIR4696-201ENST00000581431 70 ntBASIC0.74□□□□□ -2.29
USP1O94782 IGLL4P-201ENST00000614590 133 ntBASIC0.74□□□□□ -2.29
USP1O94782 MIR598-201ENST00000384868 97 ntBASIC0.73□□□□□ -2.29
USP1O94782 RNU6-135P-201ENST00000516769 101 ntBASIC0.73□□□□□ -2.29
USP1O94782 SCARNA16.5-201ENST00000517114 183 ntBASIC0.73□□□□□ -2.29
USP1O94782 MTRNR2L2-201ENST00000604882 87 ntBASIC0.73□□□□□ -2.29
USP1O94782 RNU6-664P-201ENST00000362381 107 ntBASIC0.72□□□□□ -2.29
USP1O94782 Y_RNA.207-201ENST00000364142 106 ntBASIC0.72□□□□□ -2.29
USP1O94782 Y_RNA.491-201ENST00000384417 107 ntBASIC0.72□□□□□ -2.29
USP1O94782 MIR140-201ENST00000385282 100 ntBASIC0.72□□□□□ -2.29
USP1O94782 SNORA18.5-201ENST00000516616 101 ntBASIC0.72□□□□□ -2.29
USP1O94782 MIR3920-201ENST00000581751 86 ntBASIC0.72□□□□□ -2.29
USP1O94782 MIR5588-201ENST00000581890 63 ntBASIC0.72□□□□□ -2.29
USP1O94782 RNU6-1126P-201ENST00000384002 107 ntBASIC0.71□□□□□ -2.3
USP1O94782 MIR548U-201ENST00000390728 81 ntBASIC0.71□□□□□ -2.3
USP1O94782 MIR548L-201ENST00000408303 86 ntBASIC0.71□□□□□ -2.3
USP1O94782 RNU6-287P-201ENST00000516230 98 ntBASIC0.71□□□□□ -2.3
USP1O94782 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.71□□□□□ -2.3
USP1O94782 MIR4796-201ENST00000580742 81 ntBASIC0.71□□□□□ -2.3
USP1O94782 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
USP1O94782 AC067863.3-201ENST00000624172 122 ntBASIC0.71□□□□□ -2.3
USP1O94782 AC006160.2-201ENST00000637708 154 ntBASIC0.71□□□□□ -2.3
USP1O94782 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
USP1O94782 RNA5SP173-201ENST00000364857 136 ntBASIC0.7□□□□□ -2.3
USP1O94782 RNU6-979P-201ENST00000383896 107 ntBASIC0.7□□□□□ -2.3
USP1O94782 MIR1302-4-201ENST00000408701 150 ntBASIC0.7□□□□□ -2.3
USP1O94782 MIR2113-201ENST00000459007 91 ntBASIC0.7□□□□□ -2.3
USP1O94782 MIR7107-201ENST00000611489 80 ntBASIC0.7□□□□□ -2.3
USP1O94782 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.7□□□□□ -2.3
USP1O94782 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
USP1O94782 Y_RNA.239-201ENST00000364444 113 ntBASIC0.69□□□□□ -2.3
USP1O94782 RNU6-726P-201ENST00000364680 107 ntBASIC0.69□□□□□ -2.3
USP1O94782 MIR451A-201ENST00000385059 72 ntBASIC0.69□□□□□ -2.3
USP1O94782 MIR1236-201ENST00000408340 102 ntBASIC0.69□□□□□ -2.3
USP1O94782 RNU6-935P-201ENST00000410371 100 ntBASIC0.69□□□□□ -2.3
USP1O94782 RNA5SP227-201ENST00000516184 113 ntBASIC0.69□□□□□ -2.3
USP1O94782 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
USP1O94782 SNORA25.18-201ENST00000607153 114 ntBASIC0.69□□□□□ -2.3
USP1O94782 RNA5SP517-201ENST00000364724 117 ntBASIC0.68□□□□□ -2.3
USP1O94782 RNU6-573P-201ENST00000383938 106 ntBASIC0.68□□□□□ -2.3
USP1O94782 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
USP1O94782 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.68□□□□□ -2.3
USP1O94782 RNA5SP268-201ENST00000516828 124 ntBASIC0.68□□□□□ -2.3
USP1O94782 MIR4714-201ENST00000580728 77 ntBASIC0.68□□□□□ -2.3
USP1O94782 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.68□□□□□ -2.3
USP1O94782 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.68□□□□□ -2.3
USP1O94782 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
USP1O94782 SNORD115-44-201ENST00000365391 82 ntBASIC0.67□□□□□ -2.3
USP1O94782 RNU6-820P-201ENST00000384273 107 ntBASIC0.67□□□□□ -2.3
USP1O94782 SNORA8.2-201ENST00000384372 139 ntBASIC0.67□□□□□ -2.3
USP1O94782 RNU6-1152P-201ENST00000384576 107 ntBASIC0.67□□□□□ -2.3
USP1O94782 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
USP1O94782 FGF7P7-201ENST00000514120 227 ntBASIC0.67□□□□□ -2.3
USP1O94782 AC018659.1-201ENST00000551083 169 ntBASIC0.67□□□□□ -2.3
USP1O94782 MIR3140-201ENST00000583685 90 ntBASIC0.67□□□□□ -2.3
USP1O94782 MIR6828-201ENST00000636181 60 ntBASIC0.67□□□□□ -2.3
USP1O94782 SNORD115-37-201ENST00000363768 82 ntBASIC0.66□□□□□ -2.3
USP1O94782 MIR519E-201ENST00000385075 84 ntBASIC0.66□□□□□ -2.3
USP1O94782 SNORD41.1-201ENST00000391000 69 ntBASIC0.66□□□□□ -2.3
USP1O94782 RNA5SP121-201ENST00000516537 101 ntBASIC0.66□□□□□ -2.3
USP1O94782 PVT1_3.1-201ENST00000620853 95 ntBASIC0.66□□□□□ -2.3
USP1O94782 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms