Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.3□□□□□ -2.2
SRGAP3O43295 RNU6-935P-201ENST00000410371 100 ntBASIC1.29□□□□□ -2.2
SRGAP3O43295 MIR4484-201ENST00000582855 83 ntBASIC1.29□□□□□ -2.2
SRGAP3O43295 MIR6504-201ENST00000613520 61 ntBASIC1.29□□□□□ -2.2
SRGAP3O43295 uc_338.16-201ENST00000621804 95 ntBASIC1.29□□□□□ -2.2
SRGAP3O43295 SNORD115-24-201ENST00000363528 82 ntBASIC1.28□□□□□ -2.2
SRGAP3O43295 SNORD114-27-201ENST00000363766 70 ntBASIC1.28□□□□□ -2.2
SRGAP3O43295 Y_RNA.174-201ENST00000363781 105 ntBASIC1.28□□□□□ -2.2
SRGAP3O43295 RNU6-1229P-201ENST00000364295 107 ntBASIC1.28□□□□□ -2.2
SRGAP3O43295 RNY4P3-201ENST00000365254 95 ntBASIC1.28□□□□□ -2.2
SRGAP3O43295 MIR489-201ENST00000384923 84 ntBASIC1.28□□□□□ -2.2
SRGAP3O43295 MIR451A-201ENST00000385059 72 ntBASIC1.28□□□□□ -2.2
SRGAP3O43295 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.28□□□□□ -2.2
SRGAP3O43295 AL136317.1-201ENST00000612653 226 ntBASIC1.28□□□□□ -2.2
SRGAP3O43295 Y_RNA.207-201ENST00000364142 106 ntBASIC1.27□□□□□ -2.21
SRGAP3O43295 Y_RNA.264-201ENST00000364665 102 ntBASIC1.27□□□□□ -2.21
SRGAP3O43295 RNU6-1057P-201ENST00000517162 102 ntBASIC1.27□□□□□ -2.21
SRGAP3O43295 MIR3140-201ENST00000583685 90 ntBASIC1.27□□□□□ -2.21
SRGAP3O43295 MTRNR2L2-201ENST00000604882 87 ntBASIC1.27□□□□□ -2.21
SRGAP3O43295 Y_RNA.788-201ENST00000622394 112 ntBASIC1.27□□□□□ -2.21
SRGAP3O43295 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SRGAP3O43295 MIR96-201ENST00000362288 78 ntBASIC1.26□□□□□ -2.21
SRGAP3O43295 Y_RNA.565-201ENST00000384719 101 ntBASIC1.26□□□□□ -2.21
SRGAP3O43295 MIR942-201ENST00000401111 86 ntBASIC1.26□□□□□ -2.21
SRGAP3O43295 RNU6-1052P-201ENST00000411398 104 ntBASIC1.26□□□□□ -2.21
SRGAP3O43295 FABP5P4-201ENST00000437203 171 ntBASIC1.26□□□□□ -2.21
SRGAP3O43295 snoU13.17-201ENST00000458802 104 ntBASIC1.26□□□□□ -2.21
SRGAP3O43295 SCARNA18B-201ENST00000458806 135 ntBASIC1.26□□□□□ -2.21
SRGAP3O43295 RNU7-13P-201ENST00000516413 62 ntBASIC1.26□□□□□ -2.21
SRGAP3O43295 RNU6-719P-201ENST00000516671 104 ntBASIC1.26□□□□□ -2.21
SRGAP3O43295 Y_RNA.12-201ENST00000362393 112 ntBASIC1.25□□□□□ -2.21
SRGAP3O43295 RNU4-38P-201ENST00000364472 129 ntBASIC1.25□□□□□ -2.21
SRGAP3O43295 RNA5SP117-201ENST00000365294 118 ntBASIC1.25□□□□□ -2.21
SRGAP3O43295 SNORD114-22-201ENST00000365423 72 ntBASIC1.25□□□□□ -2.21
SRGAP3O43295 RNU7-104P-201ENST00000459398 79 ntBASIC1.25□□□□□ -2.21
SRGAP3O43295 RNU6-807P-201ENST00000516805 107 ntBASIC1.25□□□□□ -2.21
SRGAP3O43295 MIR4452-201ENST00000583004 71 ntBASIC1.25□□□□□ -2.21
SRGAP3O43295 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.25□□□□□ -2.21
SRGAP3O43295 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SRGAP3O43295 Y_RNA.532-201ENST00000384590 113 ntBASIC1.24□□□□□ -2.21
SRGAP3O43295 SNORD105-201ENST00000386910 85 ntBASIC1.24□□□□□ -2.21
SRGAP3O43295 SNORD124-201ENST00000459577 104 ntBASIC1.24□□□□□ -2.21
SRGAP3O43295 RNU6-287P-201ENST00000516230 98 ntBASIC1.24□□□□□ -2.21
SRGAP3O43295 RNU6-1110P-201ENST00000516462 101 ntBASIC1.24□□□□□ -2.21
SRGAP3O43295 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.24□□□□□ -2.21
SRGAP3O43295 Y_RNA.371-201ENST00000365591 113 ntBASIC1.23□□□□□ -2.21
SRGAP3O43295 MIR644A-201ENST00000385262 94 ntBASIC1.23□□□□□ -2.21
SRGAP3O43295 AC073261.1-201ENST00000429409 121 ntBASIC1.23□□□□□ -2.21
SRGAP3O43295 AC002350.1-201ENST00000490759 375 ntBASIC1.23□□□□□ -2.21
SRGAP3O43295 RNU6-469P-201ENST00000516253 101 ntBASIC1.23□□□□□ -2.21
SRGAP3O43295 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
SRGAP3O43295 SNORD115-44-201ENST00000365391 82 ntBASIC1.22□□□□□ -2.21
SRGAP3O43295 RNU7-161P-201ENST00000517289 62 ntBASIC1.22□□□□□ -2.21
SRGAP3O43295 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
SRGAP3O43295 RNA5SP403-201ENST00000363598 108 ntBASIC1.21□□□□□ -2.22
SRGAP3O43295 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
SRGAP3O43295 Y_RNA.545-201ENST00000384652 105 ntBASIC1.21□□□□□ -2.22
SRGAP3O43295 MIR19B1-201ENST00000384829 87 ntBASIC1.21□□□□□ -2.22
SRGAP3O43295 U7.7-201ENST00000459276 60 ntBASIC1.21□□□□□ -2.22
SRGAP3O43295 RNU6-303P-201ENST00000517091 106 ntBASIC1.21□□□□□ -2.22
SRGAP3O43295 MIR3134-201ENST00000579433 74 ntBASIC1.21□□□□□ -2.22
SRGAP3O43295 YWHAEP2-201ENST00000580066 112 ntBASIC1.21□□□□□ -2.22
SRGAP3O43295 YWHAEP3-201ENST00000582767 121 ntBASIC1.21□□□□□ -2.22
SRGAP3O43295 MIR1297-201ENST00000637311 77 ntBASIC1.21□□□□□ -2.22
SRGAP3O43295 MIR2113-201ENST00000459007 91 ntBASIC1.2□□□□□ -2.22
SRGAP3O43295 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.2□□□□□ -2.22
SRGAP3O43295 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SRGAP3O43295 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
SRGAP3O43295 MIR200A-201ENST00000384875 90 ntBASIC1.19□□□□□ -2.22
SRGAP3O43295 snoU13.18-201ENST00000459483 104 ntBASIC1.19□□□□□ -2.22
SRGAP3O43295 RNU6-1335P-201ENST00000365426 107 ntBASIC1.18□□□□□ -2.22
SRGAP3O43295 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SRGAP3O43295 AL078603.1-201ENST00000603824 313 ntBASIC1.18□□□□□ -2.22
SRGAP3O43295 AC103810.9-201ENST00000606688 112 ntBASIC1.18□□□□□ -2.22
SRGAP3O43295 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.18□□□□□ -2.22
SRGAP3O43295 RNU1-93P-201ENST00000364704 169 ntBASIC1.17□□□□□ -2.22
SRGAP3O43295 RNU6-1126P-201ENST00000384002 107 ntBASIC1.17□□□□□ -2.22
SRGAP3O43295 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
SRGAP3O43295 MIR548L-201ENST00000408303 86 ntBASIC1.17□□□□□ -2.22
SRGAP3O43295 RNU6-70P-201ENST00000516438 60 ntBASIC1.17□□□□□ -2.22
SRGAP3O43295 Y_RNA.681-201ENST00000516445 113 ntBASIC1.17□□□□□ -2.22
SRGAP3O43295 RNU6-135P-201ENST00000516769 101 ntBASIC1.17□□□□□ -2.22
SRGAP3O43295 MIR3920-201ENST00000581751 86 ntBASIC1.17□□□□□ -2.22
SRGAP3O43295 MIR6734-201ENST00000621166 68 ntBASIC1.17□□□□□ -2.22
SRGAP3O43295 AC067863.3-201ENST00000624172 122 ntBASIC1.17□□□□□ -2.22
SRGAP3O43295 RNU6-411P-201ENST00000384451 107 ntBASIC1.16□□□□□ -2.22
SRGAP3O43295 MIR573-201ENST00000384964 99 ntBASIC1.16□□□□□ -2.22
SRGAP3O43295 MIR3612-201ENST00000579753 87 ntBASIC1.16□□□□□ -2.22
SRGAP3O43295 MIR548AG2-201ENST00000581228 64 ntBASIC1.16□□□□□ -2.22
SRGAP3O43295 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.16□□□□□ -2.22
SRGAP3O43295 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.22
SRGAP3O43295 RNU6-340P-201ENST00000364005 107 ntBASIC1.15□□□□□ -2.23
SRGAP3O43295 SNORA24B-201ENST00000384176 131 ntBASIC1.15□□□□□ -2.23
SRGAP3O43295 MIR520E-201ENST00000384867 87 ntBASIC1.15□□□□□ -2.23
SRGAP3O43295 AC074348.1-201ENST00000426503 132 ntBASIC1.15□□□□□ -2.23
SRGAP3O43295 AC097510.1-201ENST00000510945 133 ntBASIC1.15□□□□□ -2.23
SRGAP3O43295 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
SRGAP3O43295 MIR4639-201ENST00000584938 69 ntBASIC1.15□□□□□ -2.23
SRGAP3O43295 AC244669.1-204ENST00000621564 178 ntBASIC1.15□□□□□ -2.23
SRGAP3O43295 MIR664A-201ENST00000626086 82 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms